RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 RTN4RL1Q86UN2 441 aaPredicted RBP10.34□□□□□ -0.75
HMGN1P31-201ENST00000590085 PDILTQ8N807 584 aa10.34□□□□□ -0.75
HMGN1P31-201ENST00000590085 IPO9Q96P70 1041 aaKnown RBP10.34□□□□□ -0.75
HMGN1P31-201ENST00000590085 REEP2Q9BRK0 252 aa10.34□□□□□ -0.75
HMGN1P31-201ENST00000590085 INO80BQ9C086 356 aaPredicted RBP10.34□□□□□ -0.75
HMGN1P31-201ENST00000590085 CCDC113Q9H0I3 377 aa10.34□□□□□ -0.75
HMGN1P31-201ENST00000590085 AGPAT5Q9NUQ2 364 aa10.34□□□□□ -0.75
HMGN1P31-201ENST00000590085 ODF2LQ9ULJ1 636 aa10.34□□□□□ -0.75
HMGN1P31-201ENST00000590085 HPSEQ9Y251 543 aa10.34□□□□□ -0.75
HMGN1P31-201ENST00000590085 COL6A3P12111 3177 aa10.34□□□□□ -0.75
HMGN1P31-201ENST00000590085 NPHP3-ACAD11A0A0J9YXS1 232 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 A0A1W2PQ27 194 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 A0A1W2PQ64 194 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 A0A1W2PQD8 194 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 MYMKA6NI61 221 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 LRRIQ4A6NIV6 560 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 PFKFB1P16118 471 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 CMA1P23946 247 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 ZNF131P52739 623 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 SMAD3P84022 425 aaKnown RBP10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 RAD51AP2Q09MP3 1159 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 NFX1Q12986 1120 aaKnown RBP10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 GIT2Q14161 759 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 DHX8Q14562 1220 aaKnown RBP10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 PPP2R5AQ15172 486 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 PCBP1Q15365 356 aaKnown RBP eCLIP10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 HERC6Q8IVU3 1022 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 CRIPAKQ8N1N5 446 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 PHOSPHO2Q8TCD6 241 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 KIFC3Q9BVG8 833 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 PANK2Q9BZ23 570 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 TNMDQ9H2S6 317 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 CUEDC2Q9H467 287 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 C17orf75Q9HAS0 396 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 POLD4Q9HCU8 107 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 KBTBD4Q9NVX7 518 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 FAM13BQ9NYF5 915 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 ARHGAP28Q9P2N2 729 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 CNTNAP2Q9UHC6 1331 aa10.33□□□□□ -0.76
HMGN1P31-201ENST00000590085 GRXCR1A8MXD5 290 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 C9IYK1 514 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 ENPP3O14638 875 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 POLR2DO15514 142 aaKnown RBP10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 ACTN4O43707 911 aaKnown RBP10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 TSPAN1O60635 241 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 GJB5O95377 273 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 AMHP03971 560 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 EDN1P05305 212 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 PLS3P13797 630 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 HOXA11P31270 313 aaPredicted RBP10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 NPTX2P47972 431 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 PEX3P56589 373 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 DMP1Q13316 513 aaPredicted RBP10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 FAM187BQ17R55 369 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 SV2BQ7L1I2 683 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 CATSPER4Q7RTX7 472 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 TMCO2Q7Z6W1 182 aaPredicted RBP10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 MYOCDQ8IZQ8 938 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 IQUBQ8NA54 791 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 SPIRE2Q8WWL2 714 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 KCNN1Q92952 543 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 DHX58Q96C10 678 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 DNAJC19Q96DA6 116 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 IFT74Q96LB3 600 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 ADAM2Q99965 735 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 TRAIPQ9BWF2 469 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 C2orf40Q9H1Z8 148 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 FZD8Q9H461 694 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 GOLPH3LQ9H4A5 285 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 MAGEF1Q9HAY2 307 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 RC3H2Q9HBD1 1191 aaKnown RBP10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 CHST12Q9NRB3 414 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 RGS18Q9NS28 235 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 C1orf112Q9NSG2 853 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 KCNH3Q9ULD8 1083 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 PIN4Q9Y237 131 aaKnown RBP10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 PRUNE2Q8WUY3 3088 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 PHLPP2Q6ZVD8 1323 aa10.32□□□□□ -0.76
HMGN1P31-201ENST00000590085 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 A0A1B0GVL5 298 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 FRMD3A2A2Y4 597 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 DENND3A2RUS2 1198 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 SFI1A8K8P3 1242 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 INO80B-WBP1J3KQ70 363 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 B4GALT5O43286 388 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 ERLIN2O94905 339 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 PBX2P40425 430 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 SARSP49591 514 aaKnown RBP10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 FXR1P51114 621 aaKnown RBP eCLIP10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 NDUFA8P51970 172 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 EFNA5P52803 228 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 NCKAP1LP55160 1127 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 HTRA4P83105 476 aaPredicted RBP10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 CNNM4Q6P4Q7 775 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 SLC24A5Q71RS6 500 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 TAS1R3Q7RTX0 852 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 NPAS4Q8IUM7 802 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 ZBTB8OSQ8IWT0 167 aa10.31□□□□□ -0.76
HMGN1P31-201ENST00000590085 FSIP1Q8NA03 581 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms