RNA–Protein interactions for RNA: ENST00000590027.1

NFIX-212, Transcript of nuclear factor I X, humanhuman

TSL 2

Gene NFIX, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-212ENST00000590027 KIF3AQ9Y496 699 aa16.76■□□□□ 0.27
NFIX-212ENST00000590027 MEIS3P2A8K0S8 358 aa16.75■□□□□ 0.27
NFIX-212ENST00000590027 RAB27AP51159 221 aa16.75■□□□□ 0.27
NFIX-212ENST00000590027 CAPSQ13938 189 aa16.75■□□□□ 0.27
NFIX-212ENST00000590027 CSPP1Q1MSJ5 1256 aa16.75■□□□□ 0.27
NFIX-212ENST00000590027 LONRF3Q496Y0 759 aa16.75■□□□□ 0.27
NFIX-212ENST00000590027 CATSPER3Q86XQ3 398 aa16.75■□□□□ 0.27
NFIX-212ENST00000590027 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.75■□□□□ 0.27
NFIX-212ENST00000590027 POLR3FQ9H1D9 316 aaPredicted RBP16.75■□□□□ 0.27
NFIX-212ENST00000590027 ASAP2O43150 1006 aa16.74■□□□□ 0.27
NFIX-212ENST00000590027 TBX10O75333 385 aa16.74■□□□□ 0.27
NFIX-212ENST00000590027 IL9P15248 144 aa16.74■□□□□ 0.27
NFIX-212ENST00000590027 GJB2P29033 226 aa16.74■□□□□ 0.27
NFIX-212ENST00000590027 TOB1P50616 345 aaPredicted RBP16.74■□□□□ 0.27
NFIX-212ENST00000590027 PTENP60484 403 aa16.74■□□□□ 0.27
NFIX-212ENST00000590027 UBE3AQ05086 875 aa16.74■□□□□ 0.27
NFIX-212ENST00000590027 MXD4Q14582 209 aaPredicted RBP16.74■□□□□ 0.27
NFIX-212ENST00000590027 KCNT2Q6UVM3 1135 aa16.74■□□□□ 0.27
NFIX-212ENST00000590027 C4orf32Q8N8J7 132 aa16.74■□□□□ 0.27
NFIX-212ENST00000590027 ERMNQ8TAM6 284 aa16.74■□□□□ 0.27
NFIX-212ENST00000590027 ZNF558Q96NG5 402 aa16.74■□□□□ 0.27
NFIX-212ENST00000590027 POLR3CQ9BUI4 534 aaPredicted RBP16.74■□□□□ 0.27
NFIX-212ENST00000590027 MRPL9Q9BYD2 267 aaKnown RBP16.74■□□□□ 0.27
NFIX-212ENST00000590027 IGFLR1Q9H665 355 aa16.74■□□□□ 0.27
NFIX-212ENST00000590027 TLR9Q9NR96 1032 aa16.74■□□□□ 0.27
NFIX-212ENST00000590027 PCDHB6Q9Y5E3 794 aa16.74■□□□□ 0.27
NFIX-212ENST00000590027 LINC01565O15544 149 aa16.73■□□□□ 0.27
NFIX-212ENST00000590027 ERLIN2O94905 339 aa16.73■□□□□ 0.27
NFIX-212ENST00000590027 SKIP12755 728 aa16.73■□□□□ 0.27
NFIX-212ENST00000590027 GLRA2P23416 452 aa16.73■□□□□ 0.27
NFIX-212ENST00000590027 ARL2P36404 184 aa16.73■□□□□ 0.27
NFIX-212ENST00000590027 LTBRP36941 435 aa16.73■□□□□ 0.27
NFIX-212ENST00000590027 FXR2P51116 673 aaKnown RBP eCLIP16.73■□□□□ 0.27
NFIX-212ENST00000590027 DLX2Q07687 328 aaPredicted RBP16.73■□□□□ 0.27
NFIX-212ENST00000590027 TFDP1Q14186 410 aa16.73■□□□□ 0.27
NFIX-212ENST00000590027 CTC1Q2NKJ3 1217 aa16.73■□□□□ 0.27
NFIX-212ENST00000590027 HAUS3Q68CZ6 603 aa16.73■□□□□ 0.27
NFIX-212ENST00000590027 MCTP1Q6DN14 999 aa16.73■□□□□ 0.27
NFIX-212ENST00000590027 PTCRAQ6ISU1 281 aaPredicted RBP16.73■□□□□ 0.27
NFIX-212ENST00000590027 PPP2R3CQ969Q6 453 aa16.73■□□□□ 0.27
NFIX-212ENST00000590027 GPRC5CQ9NQ84 441 aa16.73■□□□□ 0.27
NFIX-212ENST00000590027 INPP5FQ9Y2H2 1132 aa16.73■□□□□ 0.27
NFIX-212ENST00000590027 BDP1A6H8Y1 2624 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 INO80B-WBP1J3KQ70 363 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 NCK2O43639 380 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 TSPAN1O60635 241 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 RPA1P27694 616 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 HOXA11P31270 313 aaPredicted RBP16.72■□□□□ 0.27
NFIX-212ENST00000590027 PPM1AP35813 382 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 NRIP1P48552 1158 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 MCM2P49736 904 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 MBTD1Q05BQ5 628 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 PTGDRQ13258 359 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 CLUL1Q15846 466 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 UBXN11Q5T124 520 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 PLPP4Q5VZY2 271 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 GLB1LQ6UWU2 654 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 MAEAQ7L5Y9 396 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 IFNLR1Q8IU57 520 aaPredicted RBP16.72■□□□□ 0.27
NFIX-212ENST00000590027 MRPS27Q92552 414 aaKnown RBP16.72■□□□□ 0.27
NFIX-212ENST00000590027 DBR1Q9UK59 544 aaKnown RBP16.72■□□□□ 0.27
NFIX-212ENST00000590027 PCDHB2Q9Y5E7 798 aa16.72■□□□□ 0.27
NFIX-212ENST00000590027 FSCN2O14926 492 aa16.71■□□□□ 0.27
NFIX-212ENST00000590027 ZNF623O75123 536 aa16.71■□□□□ 0.27
NFIX-212ENST00000590027 ZC3H11AO75152 810 aaKnown RBP eCLIP16.71■□□□□ 0.27
NFIX-212ENST00000590027 XRCC6P12956 609 aaKnown RBP eCLIP16.71■□□□□ 0.27
NFIX-212ENST00000590027 CCT6AP40227 531 aaKnown RBP16.71■□□□□ 0.27
NFIX-212ENST00000590027 ERVFC1P60507 584 aa16.71■□□□□ 0.27
NFIX-212ENST00000590027 PLCB3Q01970 1234 aa16.71■□□□□ 0.27
NFIX-212ENST00000590027 ECM1Q16610 540 aa16.71■□□□□ 0.27
NFIX-212ENST00000590027 AGMOQ6ZNB7 445 aa16.71■□□□□ 0.27
NFIX-212ENST00000590027 RBM23Q86U06 439 aaKnown RBP16.71■□□□□ 0.27
NFIX-212ENST00000590027 SLC39A11Q8N1S5 342 aa16.71■□□□□ 0.27
NFIX-212ENST00000590027 MCPH1Q8NEM0 835 aa16.71■□□□□ 0.27
NFIX-212ENST00000590027 MICAL1Q8TDZ2 1067 aa16.71■□□□□ 0.27
NFIX-212ENST00000590027 CPB2Q96IY4 423 aa16.71■□□□□ 0.27
NFIX-212ENST00000590027 NACC1Q96RE7 527 aa16.71■□□□□ 0.27
NFIX-212ENST00000590027 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.71■□□□□ 0.27
NFIX-212ENST00000590027 TBC1D13Q9NVG8 400 aa16.71■□□□□ 0.27
NFIX-212ENST00000590027 SMC3Q9UQE7 1217 aa16.71■□□□□ 0.27
NFIX-212ENST00000590027 LZTS1Q9Y250 596 aa16.71■□□□□ 0.27
NFIX-212ENST00000590027 ARHGEF35A5YM69 484 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 GRXCR2A6NFK2 248 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 LRRIQ4A6NIV6 560 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 NT5C1B-RDH14C9J2C7 533 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 H3BQV1 296 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 NDUFV1P49821 464 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 BCAR1P56945 870 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 POU5F1BQ06416 359 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 AMHR2Q16671 573 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 NOMO2Q5JPE7 1267 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 NOTUMQ6P988 496 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 PADI6Q6TGC4 694 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 TMEM173Q86WV6 379 aaPredicted RBP16.7■□□□□ 0.26
NFIX-212ENST00000590027 EFHBQ8N7U6 833 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 IGSF22Q8N9C0 903 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 SNX29Q8TEQ0 813 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 RSPH1Q8WYR4 309 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 PGBD4Q96DM1 585 aa16.7■□□□□ 0.26
NFIX-212ENST00000590027 TCF25Q9BQ70 676 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms