RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 ATG4CQ96DT6 458 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 CDHR1Q96JP9 859 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 NOX5Q96PH1 765 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 SPAG5Q96R06 1193 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 IWS1Q96ST2 819 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 RMDN3Q96TC7 470 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 ARID3AQ99856 593 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 SENP7Q9BQF6 1050 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 HTATIP2Q9BUP3 242 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 STRA6Q9BX79 667 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 ST6GALNAC4Q9H4F1 302 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 ARFGAP3Q9NP61 516 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 NLRC4Q9NPP4 1024 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 AGPAT3Q9NRZ7 376 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 ANKEF1Q9NU02 776 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 DMAC2Q9NW81 257 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 TMOD4Q9NZQ9 345 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 WRAP73Q9P2S5 460 aaPredicted RBP10.87□□□□□ -0.67
VPS25-202ENST00000589219 PUF60Q9UHX1 559 aaKnown RBP10.87□□□□□ -0.67
VPS25-202ENST00000589219 RAB21Q9UL25 225 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 GABRQQ9UN88 632 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 FRMD4BQ9Y2L6 1034 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 HYOU1Q9Y4L1 999 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 MACROD2A1Z1Q3 448 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 BTNL10A8MVZ5 291 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 MAPK13O15264 365 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 PLS3P13797 630 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 UCHL3P15374 230 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 PRLRP16471 622 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 FERP16591 822 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 TCP1P17987 556 aaKnown RBP10.86□□□□□ -0.67
VPS25-202ENST00000589219 PON1P27169 355 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 PSMC5P62195 406 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 IRX3P78415 501 aaPredicted RBP10.86□□□□□ -0.67
VPS25-202ENST00000589219 ITIH3Q06033 890 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 TCERG1LQ5VWI1 586 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 CC2D1AQ6P1N0 951 aaPredicted RBP10.86□□□□□ -0.67
VPS25-202ENST00000589219 ZNF572Q7Z3I7 529 aaPredicted RBP10.86□□□□□ -0.67
VPS25-202ENST00000589219 VPS36Q86VN1 386 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 SMAP1Q8IYB5 467 aaPredicted RBP10.86□□□□□ -0.67
VPS25-202ENST00000589219 CAGE1Q8TC20 777 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 HNRNPLLQ8WVV9 542 aaKnown RBP10.86□□□□□ -0.67
VPS25-202ENST00000589219 VTI1AQ96AJ9 217 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 BORCS6Q96GS4 357 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 ACCSQ96QU6 501 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 TAAR1Q96RJ0 339 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 CRACR2AQ9BSW2 395 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 PARD6BQ9BYG5 372 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 ASCC2Q9H1I8 757 aaPredicted RBP10.86□□□□□ -0.67
VPS25-202ENST00000589219 HOMER2Q9NSB8 354 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 ZNF446Q9NWS9 450 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 GCNT4Q9P109 453 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 SNX12Q9UMY4 172 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 ADAMTS5Q9UNA0 930 aa10.86□□□□□ -0.67
VPS25-202ENST00000589219 NFASCO94856 1347 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 A0A0G2JMZ2 1700 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 TARSL2A2RTX5 802 aaKnown RBP10.85□□□□□ -0.67
VPS25-202ENST00000589219 CLIC2O15247 247 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 PNMA6AP0CW24 399 aaPredicted RBP10.85□□□□□ -0.67
VPS25-202ENST00000589219 ZSCAN20P17040 1043 aaPredicted RBP10.85□□□□□ -0.67
VPS25-202ENST00000589219 ERCC3P19447 782 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 YWHABP31946 246 aaKnown RBP10.85□□□□□ -0.67
VPS25-202ENST00000589219 CASP4P49662 377 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 JAM2P57087 298 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 MYL7Q01449 175 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 GFPT1Q06210 699 aaPredicted RBP10.85□□□□□ -0.67
VPS25-202ENST00000589219 GABPB1Q06547 395 aaPredicted RBP10.85□□□□□ -0.67
VPS25-202ENST00000589219 IFI16Q16666 785 aaKnown RBP10.85□□□□□ -0.67
VPS25-202ENST00000589219 SNRNP48Q6IEG0 339 aaKnown RBP10.85□□□□□ -0.67
VPS25-202ENST00000589219 CCDC70Q6NSX1 233 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 DPY19L2P1Q6NXN4 242 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 NSMFQ6X4W1 530 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 SYCP3Q8IZU3 236 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 DAW1Q8N136 415 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 FAM133AQ8N9E0 248 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 U2AF1L4Q8WU68 220 aaKnown RBP10.85□□□□□ -0.67
VPS25-202ENST00000589219 DPF3Q92784 378 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 TEX13BQ9BXU2 312 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 ACAD9Q9H845 621 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 ANKZF1Q9H8Y5 726 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 PKD2L1Q9P0L9 805 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 SAMM50Q9Y512 469 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 FHOD1Q9Y613 1164 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 CAPN6Q9Y6Q1 641 aa10.85□□□□□ -0.67
VPS25-202ENST00000589219 SFI1A8K8P3 1242 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 P4HA2O15460 535 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 MOCS3O95396 460 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 SGPL1O95470 568 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 INHAP05111 366 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 CCDC172P0C7W6 258 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 MYCLP12524 364 aaPredicted RBP10.84□□□□□ -0.67
VPS25-202ENST00000589219 KRT13P13646 458 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 ELNP15502 786 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 ABCD1P33897 745 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 STAT1P42224 750 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 FMO5P49326 533 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 NCKAP1LP55160 1127 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 BFSP1Q12934 665 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 BAATQ14032 418 aaPredicted RBP10.84□□□□□ -0.67
VPS25-202ENST00000589219 COG2Q14746 738 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms