RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 CACNA2D3Q8IZS8 1091 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 SKA2Q8WVK7 121 aaPredicted RBP16.61■□□□□ 0.25
PTPRS-206ENST00000588552 NCAPGQ9BPX3 1015 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 TMEM60Q9H2L4 133 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 KCND2Q9NZV8 630 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 NXNQ6DKJ4 435 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 RWDD4Q6NW29 188 aaKnown RBP16.61■□□□□ 0.25
PTPRS-206ENST00000588552 ZFYVE28Q9HCC9 887 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 MSH2P43246 934 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 SLC7A5Q01650 507 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 SLMAPQ14BN4 828 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 CCDC144BQ3MJ40 725 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 KSR1Q8IVT5 923 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 SMAP1Q8IYB5 467 aaPredicted RBP16.61■□□□□ 0.25
PTPRS-206ENST00000588552 ADSSL1Q8N142 457 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 TTC39CQ8N584 583 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 GPRC5AQ8NFJ5 357 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 RIT2Q99578 217 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 LCMT1Q9UIC8 334 aa16.61■□□□□ 0.25
PTPRS-206ENST00000588552 MYMKA6NI61 221 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 SLC16A3O15427 465 aaKnown RBP16.6■□□□□ 0.25
PTPRS-206ENST00000588552 RHOBTB3O94955 611 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 CASP7P55210 303 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 MXD4Q14582 209 aaPredicted RBP16.6■□□□□ 0.25
PTPRS-206ENST00000588552 LRRC8CQ8TDW0 803 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 RBM41Q96IZ5 413 aaKnown RBP16.6■□□□□ 0.25
PTPRS-206ENST00000588552 CALR3Q96L12 384 aaKnown RBP16.6■□□□□ 0.25
PTPRS-206ENST00000588552 HSPBP1Q9NZL4 362 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 MROH1Q8NDA8 1641 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 ZRANB2O95218 330 aaKnown RBP eCLIP16.6■□□□□ 0.25
PTPRS-206ENST00000588552 IL1R1P14778 569 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 HUNKP57058 714 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 ZNF746Q6NUN9 644 aaPredicted RBP16.6■□□□□ 0.25
PTPRS-206ENST00000588552 USP49Q70CQ1 688 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 PARD6BQ9BYG5 372 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 KCNH4Q9UQ05 1017 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 KIAA0391O15091 583 aaKnown RBP16.6■□□□□ 0.25
PTPRS-206ENST00000588552 MAFGO15525 162 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 PLS3P13797 630 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 CFAP57Q96MR6 1250 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 ACAP3Q96P50 834 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 CCDC160A6NGH7 325 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 SLC4A1P02730 911 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 LMBRD2Q68DH5 695 aaPredicted RBP16.6■□□□□ 0.25
PTPRS-206ENST00000588552 ZNF710Q8N1W2 664 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 NUP85Q9BW27 656 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 MOV10L1Q9BXT6 1211 aaKnown RBP16.6■□□□□ 0.25
PTPRS-206ENST00000588552 SMYD2Q9NRG4 433 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 CCDC188H7C350 402 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 CELF2O95319 508 aaKnown RBP16.6■□□□□ 0.25
PTPRS-206ENST00000588552 ZNF564Q8TBZ8 553 aaPredicted RBP16.6■□□□□ 0.25
PTPRS-206ENST00000588552 ACER1Q8TDN7 264 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 TACC3Q9Y6A5 838 aa16.6■□□□□ 0.25
PTPRS-206ENST00000588552 SYNGAP1Q96PV0 1343 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 POLRMTO00411 1230 aaKnown RBP16.59■□□□□ 0.25
PTPRS-206ENST00000588552 FTLP02792 175 aaPredicted RBP16.59■□□□□ 0.25
PTPRS-206ENST00000588552 RASSF2P50749 326 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 ADGRA1Q86SQ6 560 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 CYP2B6P20813 491 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 SOX5P35711 763 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 ELMSAN1Q6PJG2 1045 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 KCNH7Q9NS40 1196 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 PIN4Q9Y237 131 aaKnown RBP16.59■□□□□ 0.25
PTPRS-206ENST00000588552 A8MXQ7 604 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 ATP8B1O43520 1251 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 FXR2P51116 673 aaKnown RBP eCLIP16.59■□□□□ 0.25
PTPRS-206ENST00000588552 PRKCEQ02156 737 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 EMC2Q15006 297 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 XRRA1Q6P2D8 792 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 FMO2Q99518 471 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 FBXO28Q9NVF7 368 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 RPS6P62753 249 aaKnown RBP16.59■□□□□ 0.25
PTPRS-206ENST00000588552 BBS9Q3SYG4 887 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 PDXDC1Q6P996 788 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 DAGLBQ8NCG7 672 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 TAAR1Q96RJ0 339 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 INTS9Q9NV88 658 aaKnown RBP16.59■□□□□ 0.25
PTPRS-206ENST00000588552 LIMA1Q9UHB6 759 aaKnown RBP16.59■□□□□ 0.25
PTPRS-206ENST00000588552 POLIQ9UNA4 740 aa16.59■□□□□ 0.25
PTPRS-206ENST00000588552 ICAM1P05362 532 aa16.58■□□□□ 0.25
PTPRS-206ENST00000588552 C6orf222P0C671 652 aaPredicted RBP16.58■□□□□ 0.25
PTPRS-206ENST00000588552 PSMC1P62191 440 aaKnown RBP16.58■□□□□ 0.25
PTPRS-206ENST00000588552 CDC42EP1Q00587 391 aa16.58■□□□□ 0.25
PTPRS-206ENST00000588552 TMED2Q15363 201 aa16.58■□□□□ 0.25
PTPRS-206ENST00000588552 PLA2G4FQ68DD2 849 aa16.58■□□□□ 0.25
PTPRS-206ENST00000588552 EFCAB13Q8IY85 973 aa16.58■□□□□ 0.25
PTPRS-206ENST00000588552 HEMGNQ9BXL5 484 aa16.58■□□□□ 0.25
PTPRS-206ENST00000588552 IL9RQ01113 521 aa16.58■□□□□ 0.24
PTPRS-206ENST00000588552 FMR1Q06787 632 aaKnown RBP eCLIP16.58■□□□□ 0.246e-7■■■■□ 24.7
PTPRS-206ENST00000588552 STK4Q13043 487 aa16.58■□□□□ 0.24
PTPRS-206ENST00000588552 THOC5Q13769 683 aaKnown RBP16.58■□□□□ 0.24
PTPRS-206ENST00000588552 SDC4P31431 198 aa16.58■□□□□ 0.24
PTPRS-206ENST00000588552 ADCY1Q08828 1119 aa16.58■□□□□ 0.24
PTPRS-206ENST00000588552 GLYCTKQ8IVS8 523 aa16.58■□□□□ 0.24
PTPRS-206ENST00000588552 WHAMMQ8TF30 809 aa16.58■□□□□ 0.24
PTPRS-206ENST00000588552 KCNB2Q92953 911 aa16.58■□□□□ 0.24
PTPRS-206ENST00000588552 ZNF560Q96MR9 790 aa16.58■□□□□ 0.24
PTPRS-206ENST00000588552 SLITRK6Q9H5Y7 841 aa16.58■□□□□ 0.24
PTPRS-206ENST00000588552 CAPN11Q9UMQ6 739 aa16.58■□□□□ 0.24
PTPRS-206ENST00000588552 ANO9A1A5B4 782 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms