RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 EEF2KMTQ96G04 330 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 NLRP4Q96MN2 994 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 ACCSQ96QU6 501 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 PPP1R16BQ96T49 567 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 TYW1Q9NV66 732 aaKnown RBP12.43□□□□□ -0.42
VMP1-207ENST00000588131 TBX20Q9UMR3 447 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 TRAF3IP3Q9Y228 551 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 KAT6AQ92794 2004 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 CLIC2O15247 247 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 CYP2C9P11712 490 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 TMOD1P28289 359 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 EDRF1Q3B7T1 1238 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 FAM47CQ5HY64 1035 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 CDCA2Q69YH5 1023 aaPredicted RBP12.42□□□□□ -0.42
VMP1-207ENST00000588131 GDF6Q6KF10 455 aaPredicted RBP12.42□□□□□ -0.42
VMP1-207ENST00000588131 FBXO46Q6PJ61 603 aaPredicted RBP12.42□□□□□ -0.42
VMP1-207ENST00000588131 SARM1Q6SZW1 724 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 ZC3H3Q8IXZ2 948 aaKnown RBP12.42□□□□□ -0.42
VMP1-207ENST00000588131 SYCP3Q8IZU3 236 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 RNF149Q8NC42 400 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 KCNN1Q92952 543 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 DEFB118Q96PH6 123 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 CCDC113Q9H0I3 377 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 FAM49AQ9H0Q0 323 aaPredicted RBP12.42□□□□□ -0.42
VMP1-207ENST00000588131 GBP3Q9H0R5 595 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 THAP9Q9H5L6 903 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 TMEM206Q9H813 350 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 AGPAT3Q9NRZ7 376 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 GTF2IRD1Q9UHL9 959 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 KCNG1Q9UIX4 513 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 AKT3Q9Y243 479 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 USP20Q9Y2K6 914 aa12.42□□□□□ -0.42
VMP1-207ENST00000588131 PHLPP2Q6ZVD8 1323 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 SMIM35A0A1B0GVV1 85 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 MOXD2PA6NHM9 499 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 KCNJ18B7U540 433 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 ANKRD63C9JTQ0 380 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 H0YCG3 227 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 ASAP2O43150 1006 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 CALUO43852 315 aaPredicted RBP12.41□□□□□ -0.42
VMP1-207ENST00000588131 NR3C1P04150 777 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 GPC3P51654 580 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 FANCCQ00597 558 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 TMEM62Q0P6H9 643 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 TFDP1Q14186 410 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 KCNJ12Q14500 433 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 SLC39A4Q6P5W5 647 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 APTXQ7Z2E3 356 aaKnown RBP12.41□□□□□ -0.42
VMP1-207ENST00000588131 SESTD1Q86VW0 696 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 ARRDC4Q8NCT1 418 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 NOC3LQ8WTT2 800 aaKnown RBP12.41□□□□□ -0.42
VMP1-207ENST00000588131 MAP7D2Q96T17 732 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 TSEN34Q9BSV6 310 aaKnown RBP12.41□□□□□ -0.42
VMP1-207ENST00000588131 RNF208Q9H0X6 261 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 TMEM134Q9H6X4 195 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 PCNTO95613 3336 aa12.41□□□□□ -0.42
VMP1-207ENST00000588131 TRIP12Q14669 1992 aaPredicted RBP12.41□□□□□ -0.42
VMP1-207ENST00000588131 A0A087WZ62 844 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 A0A1W2PQ45 241 aaPredicted RBP12.4□□□□□ -0.42
VMP1-207ENST00000588131 A0A1W2PQY0 241 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 RBAK-RBAKDNI3L0D1 243 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 K7ERI5 159 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 CABYRO75952 493 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 SLC34A2O95436 690 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 ADCY5O95622 1261 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 GNAT1P11488 350 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 CDK11BP21127 795 aaKnown RBP12.4□□□□□ -0.42
VMP1-207ENST00000588131 NR2F2P24468 414 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 ZNF75DP51815 510 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 NLRP11P59045 1033 aaKnown RBP12.4□□□□□ -0.42
VMP1-207ENST00000588131 PTENP60484 403 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 FKBP3Q00688 224 aaKnown RBP12.4□□□□□ -0.42
VMP1-207ENST00000588131 MBTD1Q05BQ5 628 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 ADAM9Q13443 819 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 ITGA7Q13683 1181 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 NFIL3Q16649 462 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 TCP11X2Q5H9J9 407 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 HS2ST1Q7LGA3 356 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 ZBTB8OSQ8IWT0 167 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 TNS4Q8IZW8 715 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 DNAJB3Q8WWF6 145 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 ZNF333Q96JL9 665 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 CNOT6LQ96LI5 555 aaKnown RBP12.4□□□□□ -0.42
VMP1-207ENST00000588131 CEP63Q96MT8 703 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 CTAGE1Q96RT6 745 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 FDXACB1Q9BRP7 624 aaPredicted RBP12.4□□□□□ -0.42
VMP1-207ENST00000588131 C2orf40Q9H1Z8 148 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 MINDY3Q9H8M7 445 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 IFT122Q9HBG6 1241 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 IFNKQ9P0W0 207 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 LIMA1Q9UHB6 759 aaKnown RBP12.4□□□□□ -0.42
VMP1-207ENST00000588131 EXOC7Q9UPT5 735 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 PHF24Q9UPV7 400 aa12.4□□□□□ -0.42
VMP1-207ENST00000588131 TTLL13PA6NNM8 815 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 KBTBD13C9JR72 458 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 DNM1LO00429 736 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 CETN3O15182 167 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 SERPINC1P01008 464 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 PIGRP01833 764 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 SCP2P22307 547 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms