RNA–Protein interactions for RNA: ENST00000587896.5

CIRBP-214, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-214ENST00000587896 POLR3CQ9BUI4 534 aaPredicted RBP22.92■■□□□ 1.26
CIRBP-214ENST00000587896 TCF20Q9UGU0 1960 aaKnown RBP22.92■■□□□ 1.26
CIRBP-214ENST00000587896 PLXNA4Q9HCM2 1894 aa22.92■■□□□ 1.26
CIRBP-214ENST00000587896 NCK2O43639 380 aa22.91■■□□□ 1.26
CIRBP-214ENST00000587896 USO1O60763 962 aaKnown RBP22.91■■□□□ 1.26
CIRBP-214ENST00000587896 SKIP12755 728 aa22.91■■□□□ 1.26
CIRBP-214ENST00000587896 XRCC6P12956 609 aaKnown RBP eCLIP22.91■■□□□ 1.26
CIRBP-214ENST00000587896 LTBRP36941 435 aa22.91■■□□□ 1.26
CIRBP-214ENST00000587896 PBX3P40426 434 aa22.91■■□□□ 1.26
CIRBP-214ENST00000587896 MXD4Q14582 209 aaPredicted RBP22.91■■□□□ 1.26
CIRBP-214ENST00000587896 LONRF3Q496Y0 759 aa22.91■■□□□ 1.26
CIRBP-214ENST00000587896 POTEGQ6S5H5 508 aa22.91■■□□□ 1.26
CIRBP-214ENST00000587896 KCNT2Q6UVM3 1135 aa22.91■■□□□ 1.26
CIRBP-214ENST00000587896 IGFLR1Q9H665 355 aa22.91■■□□□ 1.26
CIRBP-214ENST00000587896 KIF3AQ9Y496 699 aa22.91■■□□□ 1.26
CIRBP-214ENST00000587896 MUC3AQ02505 3323 aa22.91■■□□□ 1.26
CIRBP-214ENST00000587896 MEIS3P2A8K0S8 358 aa22.9■■□□□ 1.26
CIRBP-214ENST00000587896 LINC01565O15544 149 aa22.9■■□□□ 1.26
CIRBP-214ENST00000587896 HOXA11P31270 313 aaPredicted RBP22.9■■□□□ 1.26
CIRBP-214ENST00000587896 ARL2P36404 184 aa22.9■■□□□ 1.26
CIRBP-214ENST00000587896 RAB27AP51159 221 aa22.9■■□□□ 1.26
CIRBP-214ENST00000587896 PTENP60484 403 aa22.9■■□□□ 1.26
CIRBP-214ENST00000587896 CAPSQ13938 189 aa22.9■■□□□ 1.26
CIRBP-214ENST00000587896 PTCRAQ6ISU1 281 aaPredicted RBP22.9■■□□□ 1.26
CIRBP-214ENST00000587896 ERMNQ8TAM6 284 aa22.9■■□□□ 1.26
CIRBP-214ENST00000587896 ZNF558Q96NG5 402 aa22.9■■□□□ 1.26
CIRBP-214ENST00000587896 MRPL9Q9BYD2 267 aaKnown RBP22.9■■□□□ 1.26
CIRBP-214ENST00000587896 TLR9Q9NR96 1032 aa22.9■■□□□ 1.26
CIRBP-214ENST00000587896 PCDHB6Q9Y5E3 794 aa22.9■■□□□ 1.26
CIRBP-214ENST00000587896 BRWD1Q9NSI6 2320 aa22.9■■□□□ 1.26
CIRBP-214ENST00000587896 ZNF623O75123 536 aa22.89■■□□□ 1.25
CIRBP-214ENST00000587896 IL9P15248 144 aa22.89■■□□□ 1.25
CIRBP-214ENST00000587896 GLRA2P23416 452 aa22.89■■□□□ 1.25
CIRBP-214ENST00000587896 RPA1P27694 616 aa22.89■■□□□ 1.25
CIRBP-214ENST00000587896 GJB2P29033 226 aa22.89■■□□□ 1.25
CIRBP-214ENST00000587896 MCM2P49736 904 aa22.89■■□□□ 1.25
CIRBP-214ENST00000587896 FXR2P51116 673 aaKnown RBP eCLIP22.89■■□□□ 1.25
CIRBP-214ENST00000587896 ERVFC1P60507 584 aa22.89■■□□□ 1.25
CIRBP-214ENST00000587896 PLCB3Q01970 1234 aa22.89■■□□□ 1.25
CIRBP-214ENST00000587896 POU5F1BQ06416 359 aa22.89■■□□□ 1.25
CIRBP-214ENST00000587896 DLX2Q07687 328 aaPredicted RBP22.89■■□□□ 1.25
CIRBP-214ENST00000587896 TFDP1Q14186 410 aa22.89■■□□□ 1.25
CIRBP-214ENST00000587896 UBXN11Q5T124 520 aa22.89■■□□□ 1.25
CIRBP-214ENST00000587896 IFNLR1Q8IU57 520 aaPredicted RBP22.89■■□□□ 1.25
CIRBP-214ENST00000587896 PPP2R3CQ969Q6 453 aa22.89■■□□□ 1.25
CIRBP-214ENST00000587896 NACC1Q96RE7 527 aa22.89■■□□□ 1.25
CIRBP-214ENST00000587896 POLR3FQ9H1D9 316 aaPredicted RBP22.89■■□□□ 1.25
CIRBP-214ENST00000587896 DBR1Q9UK59 544 aaKnown RBP22.89■■□□□ 1.25
CIRBP-214ENST00000587896 PCDHB2Q9Y5E7 798 aa22.89■■□□□ 1.25
CIRBP-214ENST00000587896 GRXCR2A6NFK2 248 aa22.88■■□□□ 1.25
CIRBP-214ENST00000587896 TSPAN1O60635 241 aa22.88■■□□□ 1.25
CIRBP-214ENST00000587896 TBX10O75333 385 aa22.88■■□□□ 1.25
CIRBP-214ENST00000587896 PTGDRQ13258 359 aa22.88■■□□□ 1.25
CIRBP-214ENST00000587896 MICAL1Q8TDZ2 1067 aa22.88■■□□□ 1.25
CIRBP-214ENST00000587896 MRPS27Q92552 414 aaKnown RBP22.88■■□□□ 1.25
CIRBP-214ENST00000587896 GPRC5CQ9NQ84 441 aa22.88■■□□□ 1.25
CIRBP-214ENST00000587896 LZTS1Q9Y250 596 aa22.88■■□□□ 1.25
CIRBP-214ENST00000587896 INO80B-WBP1J3KQ70 363 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 FSCN2O14926 492 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 ERLIN2O94905 339 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 PPM1AP35813 382 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 NRIP1P48552 1158 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 MBTD1Q05BQ5 628 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 ADAM15Q13444 863 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 PUS10Q3MIT2 529 aaKnown RBP22.87■■□□□ 1.25
CIRBP-214ENST00000587896 HAUS3Q68CZ6 603 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 MCTP1Q6DN14 999 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 GLB1LQ6UWU2 654 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 MAEAQ7L5Y9 396 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 RBM23Q86U06 439 aaKnown RBP22.87■■□□□ 1.25
CIRBP-214ENST00000587896 SLC39A11Q8N1S5 342 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 RSPH1Q8WYR4 309 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 PGBD4Q96DM1 585 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 INPP5FQ9Y2H2 1132 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 MYO7AQ13402 2215 aa22.87■■□□□ 1.25
CIRBP-214ENST00000587896 OFD1O75665 1012 aa22.86■■□□□ 1.25
CIRBP-214ENST00000587896 PCBP1Q15365 356 aaKnown RBP eCLIP22.86■■□□□ 1.25
CIRBP-214ENST00000587896 ECM1Q16610 540 aa22.86■■□□□ 1.25
CIRBP-214ENST00000587896 AMHR2Q16671 573 aa22.86■■□□□ 1.25
CIRBP-214ENST00000587896 NOMO2Q5JPE7 1267 aa22.86■■□□□ 1.25
CIRBP-214ENST00000587896 AGMOQ6ZNB7 445 aa22.86■■□□□ 1.25
CIRBP-214ENST00000587896 MRPL10Q7Z7H8 261 aaKnown RBP22.86■■□□□ 1.25
CIRBP-214ENST00000587896 EFHBQ8N7U6 833 aa22.86■■□□□ 1.25
CIRBP-214ENST00000587896 NFKBIZQ9BYH8 718 aa22.86■■□□□ 1.25
CIRBP-214ENST00000587896 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.86■■□□□ 1.25
CIRBP-214ENST00000587896 TBC1D13Q9NVG8 400 aa22.86■■□□□ 1.25
CIRBP-214ENST00000587896 SPG21Q9NZD8 308 aa22.86■■□□□ 1.25
CIRBP-214ENST00000587896 LRWD1Q9UFC0 647 aa22.86■■□□□ 1.25
CIRBP-214ENST00000587896 MUTP22033 750 aa22.85■■□□□ 1.25
CIRBP-214ENST00000587896 AXLP30530 894 aa22.85■■□□□ 1.25
CIRBP-214ENST00000587896 CCT6AP40227 531 aaKnown RBP22.85■■□□□ 1.25
CIRBP-214ENST00000587896 BCAR1P56945 870 aa22.85■■□□□ 1.25
CIRBP-214ENST00000587896 CLUL1Q15846 466 aa22.85■■□□□ 1.25
CIRBP-214ENST00000587896 FAM178BQ8IXR5 827 aa22.85■■□□□ 1.25
CIRBP-214ENST00000587896 IGSF22Q8N9C0 903 aa22.85■■□□□ 1.25
CIRBP-214ENST00000587896 MCPH1Q8NEM0 835 aa22.85■■□□□ 1.25
CIRBP-214ENST00000587896 CPB2Q96IY4 423 aa22.85■■□□□ 1.25
CIRBP-214ENST00000587896 TCF25Q9BQ70 676 aa22.85■■□□□ 1.25
CIRBP-214ENST00000587896 PUF60Q9UHX1 559 aaKnown RBP22.85■■□□□ 1.25
CIRBP-214ENST00000587896 NT5C1B-RDH14C9J2C7 533 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms