RNA–Protein interactions for RNA: ENST00000587832.5

GCDH-206, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 791 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-206ENST00000587832 COL4A3BPQ9Y5P4 624 aa19.23■□□□□ 0.67
GCDH-206ENST00000587832 IRAK3Q9Y616 596 aa19.23■□□□□ 0.67
GCDH-206ENST00000587832 CCNT1O60563 726 aaKnown RBP19.22■□□□□ 0.67
GCDH-206ENST00000587832 CTDNEP1O95476 244 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 POLGP54098 1239 aaPredicted RBP19.22■□□□□ 0.67
GCDH-206ENST00000587832 NPEPPSP55786 919 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 ZXDAP98168 799 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 SPIRE1Q08AE8 756 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 BMS1Q14692 1282 aaKnown RBP19.22■□□□□ 0.67
GCDH-206ENST00000587832 ANKRD1Q15327 319 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 EPHA7Q15375 998 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 TRIM67Q6ZTA4 783 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 PIK3AP1Q6ZUJ8 805 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 CATSPER4Q7RTX7 472 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 KSR1Q8IVT5 923 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 SLFN12Q8IYM2 578 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 OXER1Q8TDS5 423 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 PSPC1Q8WXF1 523 aaKnown RBP19.22■□□□□ 0.67
GCDH-206ENST00000587832 CEP170P1Q96L14 293 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 LXNQ9BS40 222 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 TBC1D13Q9NVG8 400 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 HCFC2Q9Y5Z7 792 aa19.22■□□□□ 0.67
GCDH-206ENST00000587832 TDRD15B5MCY1 1934 aaKnown RBP19.21■□□□□ 0.67
GCDH-206ENST00000587832 ITIH3Q06033 890 aa19.21■□□□□ 0.67
GCDH-206ENST00000587832 GIT2Q14161 759 aa19.21■□□□□ 0.67
GCDH-206ENST00000587832 TPRNQ4KMQ1 711 aa19.21■□□□□ 0.67
GCDH-206ENST00000587832 NOMO2Q5JPE7 1267 aa19.21■□□□□ 0.67
GCDH-206ENST00000587832 LLGL2Q6P1M3 1020 aa19.21■□□□□ 0.67
GCDH-206ENST00000587832 SRGAP1Q7Z6B7 1085 aa19.21■□□□□ 0.67
GCDH-206ENST00000587832 RPGRIP1Q96KN7 1286 aa19.21■□□□□ 0.67
GCDH-206ENST00000587832 ZBP1Q9H171 429 aa19.21■□□□□ 0.67
GCDH-206ENST00000587832 TMEM221A6NGB7 291 aa19.2■□□□□ 0.66
GCDH-206ENST00000587832 M0R296 226 aa19.2■□□□□ 0.66
GCDH-206ENST00000587832 ZC3H11AO75152 810 aaKnown RBP eCLIP19.2■□□□□ 0.66
GCDH-206ENST00000587832 OFD1O75665 1012 aa19.2■□□□□ 0.66
GCDH-206ENST00000587832 YWHABP31946 246 aaKnown RBP19.2■□□□□ 0.66
GCDH-206ENST00000587832 PCBP1Q15365 356 aaKnown RBP eCLIP19.2■□□□□ 0.662e-6■■■■■ 36.4
GCDH-206ENST00000587832 OTUD6AQ7L8S5 288 aa19.2■□□□□ 0.66
GCDH-206ENST00000587832 DDX53Q86TM3 631 aaKnown RBP19.2■□□□□ 0.66
GCDH-206ENST00000587832 TMEM173Q86WV6 379 aaPredicted RBP19.2■□□□□ 0.66
GCDH-206ENST00000587832 POTEDQ86YR6 584 aa19.2■□□□□ 0.66
GCDH-206ENST00000587832 ZNF579Q8NAF0 562 aaKnown RBP19.2■□□□□ 0.66
GCDH-206ENST00000587832 TCP11Q8WWU5 503 aa19.2■□□□□ 0.66
GCDH-206ENST00000587832 PRPF31Q8WWY3 499 aaKnown RBP19.2■□□□□ 0.66
GCDH-206ENST00000587832 TNFRSF25Q93038 417 aa19.2■□□□□ 0.66
GCDH-206ENST00000587832 LPPQ93052 612 aa19.2■□□□□ 0.66
GCDH-206ENST00000587832 PGBD4Q96DM1 585 aa19.2■□□□□ 0.66
GCDH-206ENST00000587832 IGSF21Q96ID5 467 aa19.2■□□□□ 0.66
GCDH-206ENST00000587832 NECTIN4Q96NY8 510 aa19.2■□□□□ 0.66
GCDH-206ENST00000587832 NRDE2Q9H7Z3 1164 aa19.2■□□□□ 0.66
GCDH-206ENST00000587832 GJB4Q9NTQ9 266 aa19.2■□□□□ 0.66
GCDH-206ENST00000587832 ORC3Q9UBD5 711 aaPredicted RBP19.2■□□□□ 0.66
GCDH-206ENST00000587832 STK39Q9UEW8 545 aa19.2■□□□□ 0.66
GCDH-206ENST00000587832 MEIS3P2A8K0S8 358 aa19.19■□□□□ 0.66
GCDH-206ENST00000587832 NT5C1B-RDH14C9J2C7 533 aa19.19■□□□□ 0.66
GCDH-206ENST00000587832 ASAP2O43150 1006 aa19.19■□□□□ 0.66
GCDH-206ENST00000587832 CLASP2O75122 1294 aaKnown RBP19.19■□□□□ 0.66
GCDH-206ENST00000587832 CTSAP10619 480 aa19.19■□□□□ 0.66
GCDH-206ENST00000587832 SIGLEC14Q08ET2 396 aa19.19■□□□□ 0.66
GCDH-206ENST00000587832 LAMTOR4Q0VGL1 99 aa19.19■□□□□ 0.66
GCDH-206ENST00000587832 EMC2Q15006 297 aa19.19■□□□□ 0.66
GCDH-206ENST00000587832 PTPN21Q16825 1174 aa19.19■□□□□ 0.66
GCDH-206ENST00000587832 EARS2Q5JPH6 523 aaKnown RBP19.19■□□□□ 0.66
GCDH-206ENST00000587832 MRPL10Q7Z7H8 261 aaKnown RBP19.19■□□□□ 0.66
GCDH-206ENST00000587832 VPS52Q8N1B4 723 aa19.19■□□□□ 0.66
GCDH-206ENST00000587832 FBXL18Q96ME1 805 aa19.19■□□□□ 0.66
GCDH-206ENST00000587832 ADAM7Q9H2U9 754 aa19.19■□□□□ 0.66
GCDH-206ENST00000587832 ZSWIM4Q9H7M6 989 aa19.19■□□□□ 0.66
GCDH-206ENST00000587832 PCDHB2Q9Y5E7 798 aa19.19■□□□□ 0.66
GCDH-206ENST00000587832 CNTNAP2Q9UHC6 1331 aa19.19■□□□□ 0.66
GCDH-206ENST00000587832 BAG4O95429 457 aaKnown RBP19.18■□□□□ 0.66
GCDH-206ENST00000587832 GALTP07902 379 aa19.18■□□□□ 0.66
GCDH-206ENST00000587832 FDPSP14324 419 aaKnown RBP19.18■□□□□ 0.66
GCDH-206ENST00000587832 KRT2P35908 639 aa19.18■□□□□ 0.66
GCDH-206ENST00000587832 AK2P54819 239 aa19.18■□□□□ 0.66
GCDH-206ENST00000587832 NHLH1Q02575 133 aa19.18■□□□□ 0.66
GCDH-206ENST00000587832 CES5AQ6NT32 575 aa19.18■□□□□ 0.66
GCDH-206ENST00000587832 AGMOQ6ZNB7 445 aa19.18■□□□□ 0.66
GCDH-206ENST00000587832 FERMT3Q86UX7 667 aa19.18■□□□□ 0.66
GCDH-206ENST00000587832 TMEM143Q96AN5 459 aa19.18■□□□□ 0.66
GCDH-206ENST00000587832 MINDY3Q9H8M7 445 aa19.18■□□□□ 0.66
GCDH-206ENST00000587832 BRMS1Q9HCU9 246 aa19.18■□□□□ 0.66
GCDH-206ENST00000587832 DZANK1Q9NVP4 752 aa19.18■□□□□ 0.66
GCDH-206ENST00000587832 NR2E1Q9Y466 385 aa19.18■□□□□ 0.66
GCDH-206ENST00000587832 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.17■□□□□ 0.66
GCDH-206ENST00000587832 FAM205CA6NFA0 338 aa19.17■□□□□ 0.66
GCDH-206ENST00000587832 MARCH6O60337 910 aa19.17■□□□□ 0.66
GCDH-206ENST00000587832 LYPLA2O95372 231 aa19.17■□□□□ 0.66
GCDH-206ENST00000587832 CXCL14O95715 111 aa19.17■□□□□ 0.66
GCDH-206ENST00000587832 HOXA11P31270 313 aaPredicted RBP19.17■□□□□ 0.66
GCDH-206ENST00000587832 RNASELQ05823 741 aaKnown RBP19.17■□□□□ 0.66
GCDH-206ENST00000587832 NR5A1Q13285 461 aa19.17■□□□□ 0.66
GCDH-206ENST00000587832 UBXN11Q5T124 520 aa19.17■□□□□ 0.66
GCDH-206ENST00000587832 NCAPH2Q6IBW4 605 aa19.17■□□□□ 0.66
GCDH-206ENST00000587832 URGCPQ8TCY9 931 aa19.17■□□□□ 0.66
GCDH-206ENST00000587832 BCL7CQ8WUZ0 217 aaPredicted RBP19.17■□□□□ 0.66
GCDH-206ENST00000587832 GTF3C6Q969F1 213 aa19.17■□□□□ 0.66
GCDH-206ENST00000587832 PBXIP1Q96AQ6 731 aa19.17■□□□□ 0.66
GCDH-206ENST00000587832 DYDC2Q96IM9 177 aa19.17■□□□□ 0.66
GCDH-206ENST00000587832 RGL1Q9NZL6 768 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms