RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 PLA2G5P39877 138 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 RFC5P40937 340 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 NEK4P51957 841 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 CYP4A11Q02928 519 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 LONRF3Q496Y0 759 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 CATSPER4Q7RTX7 472 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 SLFN12Q8IYM2 578 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 SLC39A11Q8N1S5 342 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 TMEM143Q96AN5 459 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 DYDC2Q96IM9 177 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 AGPAT5Q9NUQ2 364 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 FAM105AQ9NUU6 356 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 SPG21Q9NZD8 308 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 PUF60Q9UHX1 559 aaKnown RBP21■□□□□ 0.95
TRIM47-205ENST00000587774 USP15Q9Y4E8 981 aaPredicted RBP21■□□□□ 0.95
TRIM47-205ENST00000587774 PPME1Q9Y570 386 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 WNT7AO00755 349 aa20.99■□□□□ 0.95
TRIM47-205ENST00000587774 ST3GAL1Q11201 340 aa20.99■□□□□ 0.95
TRIM47-205ENST00000587774 KCNC3Q14003 757 aa20.99■□□□□ 0.95
TRIM47-205ENST00000587774 CTTNQ14247 550 aaKnown RBP20.99■□□□□ 0.95
TRIM47-205ENST00000587774 EMC2Q15006 297 aa20.99■□□□□ 0.95
TRIM47-205ENST00000587774 PRPF31Q8WWY3 499 aaKnown RBP20.99■□□□□ 0.95
TRIM47-205ENST00000587774 PSPC1Q8WXF1 523 aaKnown RBP20.99■□□□□ 0.95
TRIM47-205ENST00000587774 MUTYHQ9UIF7 546 aa20.99■□□□□ 0.95
TRIM47-205ENST00000587774 BTBD18B2RXH4 712 aa20.98■□□□□ 0.95
TRIM47-205ENST00000587774 NT5C1B-RDH14C9J2C7 533 aa20.98■□□□□ 0.95
TRIM47-205ENST00000587774 ZBTB39O15060 712 aa20.98■□□□□ 0.95
TRIM47-205ENST00000587774 BAG4O95429 457 aaKnown RBP20.98■□□□□ 0.95
TRIM47-205ENST00000587774 SEC24BO95487 1268 aa20.98■□□□□ 0.95
TRIM47-205ENST00000587774 RAB27AP51159 221 aa20.98■□□□□ 0.95
TRIM47-205ENST00000587774 BCAR1P56945 870 aa20.98■□□□□ 0.95
TRIM47-205ENST00000587774 KRT17Q04695 432 aa20.98■□□□□ 0.95
TRIM47-205ENST00000587774 TMC7Q7Z402 723 aa20.98■□□□□ 0.95
TRIM47-205ENST00000587774 RNF135Q8IUD6 432 aa20.98■□□□□ 0.95
TRIM47-205ENST00000587774 DIS3L2Q8IYB7 885 aaKnown RBP20.98■□□□□ 0.95
TRIM47-205ENST00000587774 EXOC8Q8IYI6 725 aa20.98■□□□□ 0.95
TRIM47-205ENST00000587774 ZSWIM4Q9H7M6 989 aa20.98■□□□□ 0.95
TRIM47-205ENST00000587774 MINDY3Q9H8M7 445 aa20.98■□□□□ 0.95
TRIM47-205ENST00000587774 NGRNQ9NPE2 291 aaKnown RBP20.98■□□□□ 0.95
TRIM47-205ENST00000587774 GAS2O43903 313 aaKnown RBP20.97■□□□□ 0.95
TRIM47-205ENST00000587774 ZC3H11AO75152 810 aaKnown RBP eCLIP20.97■□□□□ 0.95
TRIM47-205ENST00000587774 SRGAP2CP0DJJ0 459 aa20.97■□□□□ 0.95
TRIM47-205ENST00000587774 SKIP12755 728 aa20.97■□□□□ 0.95
TRIM47-205ENST00000587774 LAMTOR4Q0VGL1 99 aa20.97■□□□□ 0.95
TRIM47-205ENST00000587774 CALCRLQ16602 461 aa20.97■□□□□ 0.95
TRIM47-205ENST00000587774 XKR9Q5GH70 373 aa20.97■□□□□ 0.95
TRIM47-205ENST00000587774 LLGL2Q6P1M3 1020 aa20.97■□□□□ 0.95
TRIM47-205ENST00000587774 OTUD6AQ7L8S5 288 aa20.97■□□□□ 0.95
TRIM47-205ENST00000587774 TMEM173Q86WV6 379 aaPredicted RBP20.97■□□□□ 0.95
TRIM47-205ENST00000587774 RSPH1Q8WYR4 309 aa20.97■□□□□ 0.95
TRIM47-205ENST00000587774 TBC1D13Q9NVG8 400 aa20.97■□□□□ 0.95
TRIM47-205ENST00000587774 INPP5FQ9Y2H2 1132 aa20.97■□□□□ 0.95
TRIM47-205ENST00000587774 NEMFO60524 1076 aa20.96■□□□□ 0.95
TRIM47-205ENST00000587774 ZNF623O75123 536 aa20.96■□□□□ 0.95
TRIM47-205ENST00000587774 SLITRK3O94933 977 aa20.96■□□□□ 0.95
TRIM47-205ENST00000587774 SRGAP2BP0DMP2 458 aa20.96■□□□□ 0.95
TRIM47-205ENST00000587774 ALDH7A1P49419 539 aaKnown RBP20.96■□□□□ 0.95
TRIM47-205ENST00000587774 TRIM29Q14134 588 aa20.96■□□□□ 0.95
TRIM47-205ENST00000587774 SMC1AQ14683 1233 aaKnown RBP20.96■□□□□ 0.95
TRIM47-205ENST00000587774 GLB1LQ6UWU2 654 aa20.96■□□□□ 0.95
TRIM47-205ENST00000587774 TMEM184AQ6ZMB5 413 aa20.96■□□□□ 0.95
TRIM47-205ENST00000587774 FERMT3Q86UX7 667 aa20.96■□□□□ 0.95
TRIM47-205ENST00000587774 TPH2Q8IWU9 490 aa20.96■□□□□ 0.95
TRIM47-205ENST00000587774 TCP11Q8WWU5 503 aa20.96■□□□□ 0.95
TRIM47-205ENST00000587774 FAM122AQ96E09 287 aa20.96■□□□□ 0.95
TRIM47-205ENST00000587774 TMEM169Q96HH4 297 aa20.96■□□□□ 0.95
TRIM47-205ENST00000587774 MTRQ99707 1265 aa20.96■□□□□ 0.95
TRIM47-205ENST00000587774 EIF2AK1Q9BQI3 630 aaKnown RBP20.96■□□□□ 0.95
TRIM47-205ENST00000587774 PCDHA12Q9UN75 941 aa20.96■□□□□ 0.95
TRIM47-205ENST00000587774 PCDHB2Q9Y5E7 798 aa20.96■□□□□ 0.95
TRIM47-205ENST00000587774 LOC730098B7Z3J9 87 aa20.95■□□□□ 0.94
TRIM47-205ENST00000587774 TECP42680 631 aa20.95■□□□□ 0.94
TRIM47-205ENST00000587774 HERC4Q5GLZ8 1057 aaPredicted RBP20.95■□□□□ 0.94
TRIM47-205ENST00000587774 NOMO2Q5JPE7 1267 aa20.95■□□□□ 0.94
TRIM47-205ENST00000587774 ANKRD54Q6NXT1 300 aa20.95■□□□□ 0.94
TRIM47-205ENST00000587774 SRGAP1Q7Z6B7 1085 aa20.95■□□□□ 0.94
TRIM47-205ENST00000587774 RNF149Q8NC42 400 aa20.95■□□□□ 0.94
TRIM47-205ENST00000587774 SUSD6Q92537 303 aa20.95■□□□□ 0.94
TRIM47-205ENST00000587774 NRDE2Q9H7Z3 1164 aa20.95■□□□□ 0.94
TRIM47-205ENST00000587774 TTC12Q9H892 705 aaPredicted RBP20.95■□□□□ 0.94
TRIM47-205ENST00000587774 XPNPEP1Q9NQW7 623 aa20.95■□□□□ 0.94
TRIM47-205ENST00000587774 ARIH1Q9Y4X5 557 aaPredicted RBP20.95■□□□□ 0.94
TRIM47-205ENST00000587774 CITO14578 2027 aa20.94■□□□□ 0.94
TRIM47-205ENST00000587774 C2orf71A6NGG8 1288 aa20.94■□□□□ 0.94
TRIM47-205ENST00000587774 B4GALT3O60512 393 aa20.94■□□□□ 0.94
TRIM47-205ENST00000587774 EIF5BO60841 1220 aaKnown RBP20.94■□□□□ 0.94
TRIM47-205ENST00000587774 OFD1O75665 1012 aa20.94■□□□□ 0.94
TRIM47-205ENST00000587774 AGMOQ6ZNB7 445 aa20.94■□□□□ 0.94
TRIM47-205ENST00000587774 BCL7CQ8WUZ0 217 aaPredicted RBP20.94■□□□□ 0.94
TRIM47-205ENST00000587774 APOL5Q9BWW9 433 aa20.94■□□□□ 0.94
TRIM47-205ENST00000587774 PHF7Q9BWX1 381 aaPredicted RBP20.94■□□□□ 0.94
TRIM47-205ENST00000587774 DNAJB4Q9UDY4 337 aa20.94■□□□□ 0.94
TRIM47-205ENST00000587774 HCFC2Q9Y5Z7 792 aa20.94■□□□□ 0.94
TRIM47-205ENST00000587774 PDCD11Q14690 1871 aaKnown RBP20.93■□□□□ 0.94
TRIM47-205ENST00000587774 HOXA11P31270 313 aaPredicted RBP20.93■□□□□ 0.94
TRIM47-205ENST00000587774 CA8P35219 290 aa20.93■□□□□ 0.94
TRIM47-205ENST00000587774 TXKP42681 527 aa20.93■□□□□ 0.94
TRIM47-205ENST00000587774 RNASELQ05823 741 aaKnown RBP20.93■□□□□ 0.94
TRIM47-205ENST00000587774 UBXN11Q5T124 520 aa20.93■□□□□ 0.94
TRIM47-205ENST00000587774 SYCE2Q6PIF2 218 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms