RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 PRMT2P55345 433 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 CHMP4BP1P59074 171 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 PPFIA1Q13136 1202 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 MYBPC2Q14324 1141 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 NFIL3Q16649 462 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 DCAF17Q5H9S7 520 aaPredicted RBP6.78□□□□□ -1.32
LIG3-206ENST00000586058 SLFN12LQ6IEE8 588 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 TAPT1Q6NXT6 567 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 CCDC62Q6P9F0 684 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 EPM2AIP1Q7L775 607 aaPredicted RBP6.78□□□□□ -1.32
LIG3-206ENST00000586058 ZNF720Q7Z2F6 126 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 ZSCAN30Q86W11 494 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 FMNL3Q8IVF7 1028 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 VSTM4Q8IW00 320 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 METTL13Q8N6R0 699 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 AFG1LQ8WV93 481 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 SCFD1Q8WVM8 642 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 COPS5Q92905 334 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 SH2D3AQ9BRG2 576 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 MKNK1Q9BUB5 465 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 CFHR5Q9BXR6 569 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 SEMA6BQ9H3T3 888 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 DHX33Q9H6R0 707 aaKnown RBP6.78□□□□□ -1.32
LIG3-206ENST00000586058 SUGCTQ9HAC7 445 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 PDGFCQ9NRA1 345 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 ZNHIT6Q9NWK9 470 aaKnown RBP6.78□□□□□ -1.32
LIG3-206ENST00000586058 SAGE1Q9NXZ1 904 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 ARMCX3Q9UH62 379 aaPredicted RBP6.78□□□□□ -1.32
LIG3-206ENST00000586058 PCDHA2Q9Y5H9 948 aa6.78□□□□□ -1.32
LIG3-206ENST00000586058 SCN10AQ9Y5Y9 1956 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 A0A1W2PQC6 194 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 TMEM150BA6NC51 233 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 H3BRB1 525 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 K7ERI5 159 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 M0QZ92 97 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 DYNC1LI2O43237 492 aaPredicted RBP6.77□□□□□ -1.33
LIG3-206ENST00000586058 MSCO60682 206 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 FKTNO75072 461 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 MAFO75444 373 aaPredicted RBP6.77□□□□□ -1.33
LIG3-206ENST00000586058 TRPA1O75762 1119 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 IPO7O95373 1038 aaKnown RBP6.77□□□□□ -1.33
LIG3-206ENST00000586058 TBC1D8O95759 1140 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 LDHAP00338 332 aaKnown RBP6.77□□□□□ -1.33
LIG3-206ENST00000586058 HMGCRP04035 888 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 MYL3P08590 195 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 C6orf222P0C671 652 aaPredicted RBP6.77□□□□□ -1.33
LIG3-206ENST00000586058 SMPD1P17405 629 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 PTGS1P23219 599 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 CYP2C19P33261 490 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 NPTX2P47972 431 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 FLT3LGP49771 235 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 CYP2J2P51589 502 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 CASP5P51878 434 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 PMS1P54277 932 aaKnown RBP6.77□□□□□ -1.33
LIG3-206ENST00000586058 IGBP1P78318 339 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 GTF2BQ00403 316 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 CDC42EP1Q00587 391 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 NCBP1Q09161 790 aaKnown RBP6.77□□□□□ -1.33
LIG3-206ENST00000586058 MAPK7Q13164 816 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 PLCB4Q15147 1175 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 MAPK6Q16659 721 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 VWA3BQ502W6 1294 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 ZC2HC1CQ53FD0 456 aaPredicted RBP6.77□□□□□ -1.33
LIG3-206ENST00000586058 INTS8Q75QN2 995 aaKnown RBP6.77□□□□□ -1.33
LIG3-206ENST00000586058 CCDC186Q7Z3E2 898 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 CACNA2D4Q7Z3S7 1137 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 FRMD5Q7Z6J6 570 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 TRIM50Q86XT4 487 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 MAP4K3Q8IVH8 894 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 FAM186BQ8IYM0 893 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 XXYLT1Q8NBI6 393 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 NEK11Q8NG66 645 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 POMGNT1Q8WZA1 660 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 CCDC51Q96ER9 411 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 DUSP9Q99956 384 aaKnown RBP6.77□□□□□ -1.33
LIG3-206ENST00000586058 NAA15Q9BXJ9 866 aaKnown RBP6.77□□□□□ -1.33
LIG3-206ENST00000586058 KCTD10Q9H3F6 313 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 NDST4Q9H3R1 872 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 TUT1Q9H6E5 874 aaKnown RBP6.77□□□□□ -1.33
LIG3-206ENST00000586058 KIAA1586Q9HCI6 787 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 GPRC5CQ9NQ84 441 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 TBX20Q9UMR3 447 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 AKT3Q9Y243 479 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 ZKSCAN5Q9Y2L8 839 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 ZMYM2Q9UBW7 1377 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 TANC1Q9C0D5 1861 aa6.77□□□□□ -1.33
LIG3-206ENST00000586058 NRCAMQ92823 1304 aa6.76□□□□□ -1.33
LIG3-206ENST00000586058 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.76□□□□□ -1.33
LIG3-206ENST00000586058 AKR1B15C9JRZ8 316 aaPredicted RBP6.76□□□□□ -1.33
LIG3-206ENST00000586058 CLIC2O15247 247 aa6.76□□□□□ -1.33
LIG3-206ENST00000586058 SEPT4O43236 478 aa6.76□□□□□ -1.33
LIG3-206ENST00000586058 DUSP11O75319 330 aaKnown RBP6.76□□□□□ -1.33
LIG3-206ENST00000586058 ERLIN2O94905 339 aa6.76□□□□□ -1.33
LIG3-206ENST00000586058 AFPP02771 609 aaKnown RBP6.76□□□□□ -1.33
LIG3-206ENST00000586058 GARTP22102 1010 aa6.76□□□□□ -1.33
LIG3-206ENST00000586058 MARSP56192 900 aaKnown RBP6.76□□□□□ -1.33
LIG3-206ENST00000586058 MAP2K1Q02750 393 aaPredicted RBP6.76□□□□□ -1.33
LIG3-206ENST00000586058 PRKCZQ05513 592 aa6.76□□□□□ -1.33
LIG3-206ENST00000586058 MFSD10Q14728 455 aa6.76□□□□□ -1.33
LIG3-206ENST00000586058 GRIK4Q16099 956 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms