RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CDHR5Q9HBB8 845 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 GPR32O75388 356 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 CHRNA1P02708 482 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 SSBP05455 408 aaKnown RBP eCLIP13.93□□□□□ -0.18
VMP1-202ENST00000585847 CKBP12277 381 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 CDC25BP30305 580 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 HOXD11P31277 338 aaPredicted RBP13.93□□□□□ -0.18
VMP1-202ENST00000585847 ZNF131P52739 623 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 POLGP54098 1239 aaPredicted RBP13.93□□□□□ -0.18
VMP1-202ENST00000585847 MBTPS1Q14703 1052 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 FAM26DQ5JW98 314 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 SPATA1Q5VX52 437 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 TAF2Q6P1X5 1199 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 DHX40Q8IX18 779 aaKnown RBP13.93□□□□□ -0.18
VMP1-202ENST00000585847 AOPEPQ8N6M6 819 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 METTL13Q8N6R0 699 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 GOLGA5Q8TBA6 731 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 ASAP3Q8TDY4 903 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 BSNDQ8WZ55 320 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 STAMQ92783 540 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 KCNN1Q92952 543 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 TMEM143Q96AN5 459 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 JPH2Q9BR39 696 aaPredicted RBP13.93□□□□□ -0.18
VMP1-202ENST00000585847 FAM49AQ9H0Q0 323 aaPredicted RBP13.93□□□□□ -0.18
VMP1-202ENST00000585847 BLZF1Q9H2G9 400 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 SUGCTQ9HAC7 445 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 ATP6V0A4Q9HBG4 840 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 PARVGQ9HBI0 331 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 TMEM39AQ9NV64 488 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 PANK4Q9NVE7 773 aa13.93□□□□□ -0.18
VMP1-202ENST00000585847 LARSQ9P2J5 1176 aaKnown RBP13.93□□□□□ -0.18
VMP1-202ENST00000585847 GOLGA6L6A8MZA4 724 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 RSPH10B2B2RC85 870 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 EIF3DO15371 548 aaKnown RBP eCLIP13.92□□□□□ -0.18
VMP1-202ENST00000585847 VTNP04004 478 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 RSPH10BP0C881 870 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 IDEP14735 1019 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 BMP6P22004 513 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 DEKP35659 375 aaKnown RBP13.92□□□□□ -0.18
VMP1-202ENST00000585847 SNRPFP62306 86 aaKnown RBP13.92□□□□□ -0.18
VMP1-202ENST00000585847 CACNB1Q02641 598 aaPredicted RBP13.92□□□□□ -0.18
VMP1-202ENST00000585847 ZNF618Q5T7W0 954 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 MAEAQ7L5Y9 396 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 LUZP1Q86V48 1076 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 KSR1Q8IVT5 923 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 MYOCDQ8IZQ8 938 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 CAGE1Q8TC20 777 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 KIFAP3Q92845 792 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 HVCN1Q96D96 273 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 MRFAP1L1Q96HT8 127 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 PDLIM2Q96JY6 352 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 ZNF668Q96K58 619 aaPredicted RBP13.92□□□□□ -0.18
VMP1-202ENST00000585847 PPP1R9BQ96SB3 815 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 TSG101Q99816 390 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 PPP1R12CQ9BZL4 782 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 ADAMTS10Q9H324 1103 aa13.92□□□□□ -0.18
VMP1-202ENST00000585847 CGNQ9P2M7 1197 aaKnown RBP13.92□□□□□ -0.18
VMP1-202ENST00000585847 PPP1R3GB7ZBB8 358 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 HIP1RO75146 1068 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 FAM13AO94988 1023 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 IQCF3P0C7M6 154 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 GLRA2P23416 452 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 CCNE1P24864 410 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 EEF1GP26641 437 aaKnown RBP13.91□□□□□ -0.18
VMP1-202ENST00000585847 CASP1P29466 404 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 CYP2C18P33260 490 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 THPOP40225 353 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 GPC3P51654 580 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 TMEM62Q0P6H9 643 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 COASYQ13057 564 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 GIT2Q14161 759 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 TPD52L1Q16890 204 aaPredicted RBP13.91□□□□□ -0.18
VMP1-202ENST00000585847 BMT2Q1RMZ1 405 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 HS1BP3Q53T59 392 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 IER5Q5VY09 327 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 RETREG2Q8NC44 543 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 SLC7A3Q8WY07 619 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 ERCC4Q92889 916 aaPredicted RBP13.91□□□□□ -0.18
VMP1-202ENST00000585847 FAM161BQ96MY7 647 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 PPP1R16BQ96T49 567 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 POLR3FQ9H1D9 316 aaPredicted RBP13.91□□□□□ -0.18
VMP1-202ENST00000585847 HIPK3Q9H422 1215 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 ST6GALNAC4Q9H4F1 302 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 SUCLA2Q9P2R7 463 aaPredicted RBP13.91□□□□□ -0.18
VMP1-202ENST00000585847 NOD1Q9Y239 953 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 CDY2AQ9Y6F7 541 aa13.91□□□□□ -0.18
VMP1-202ENST00000585847 PITPNM1O00562 1244 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 CAND2O75155 1236 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 GNA14O95837 355 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 TIMP1P01033 207 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 CTSHP09668 335 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 CCL23P55773 120 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 MRPS6P82932 125 aaKnown RBP13.9□□□□□ -0.18
VMP1-202ENST00000585847 RAD51AP2Q09MP3 1159 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 LAMTOR4Q0VGL1 99 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 NCAPHQ15003 741 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 TCTN1Q2MV58 587 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 HERC4Q5GLZ8 1057 aaPredicted RBP13.9□□□□□ -0.18
VMP1-202ENST00000585847 ZNF697Q5TEC3 545 aa13.9□□□□□ -0.18
VMP1-202ENST00000585847 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms