RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 TSKSQ9UJT2 592 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 TRAF3IP3Q9Y228 551 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 BCORQ6W2J9 1755 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 ARAP2Q8WZ64 1704 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 GOLGA6BA6NDN3 693 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 FOXN3O00409 490 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 TGFB1I1O43294 461 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 ATMINO43313 823 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 DSG3P32926 999 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 NPTX2P47972 431 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 TMEM132BQ14DG7 1078 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 SNRNP35Q16560 246 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 MEA1Q16626 185 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 CBWD6Q4V339 395 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 CBWD3Q5JTY5 395 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 CBWD5Q5RIA9 395 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 IFT20Q8IY31 132 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 MCPH1Q8NEM0 835 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 SPATA4Q8NEY3 305 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 BAP1Q92560 729 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 ACP6Q9NPH0 428 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 KCND1Q9NSA2 647 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 GPRC5DQ9NZD1 345 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 PCDHB4Q9Y5E5 795 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 MFAP3P55082 362 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 DLG4P78352 724 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 C9orf131Q5VYM1 1079 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 PLCB1Q9NQ66 1216 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 OLFML3Q9NRN5 406 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 NXF1Q9UBU9 619 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 FAN1Q9Y2M0 1017 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 FTLP02792 175 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 TUBBP07437 444 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 VGLL4Q14135 290 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 SLC30A5Q8TAD4 765 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 CLMNQ96JQ2 1002 aa13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 FHDC1Q9C0D6 1143 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-208ENST00000585799 GSTTP1A0A1W2PQM5 241 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 ANO9A1A5B4 782 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 EIF3DO15371 548 aaKnown RBP eCLIP13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 C2CD6Q53TS8 623 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 FAM160B1Q5W0V3 765 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 DPP9Q86TI2 863 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 CLEC4DQ8WXI8 215 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 KAT5Q92993 513 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 TARS2Q9BW92 718 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 DDX47Q9H0S4 455 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 APEX2Q9UBZ4 518 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 RASSF10A6NK89 507 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 SLC16A3O15427 465 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 ZEB2O60315 1214 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 FDX1P10109 184 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 ZSCAN20P17040 1043 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 HOXA7P31268 230 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 PLCB3Q01970 1234 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 SEL1L2Q5TEA6 688 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 KCTD16Q68DU8 428 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 TRIM50Q86XT4 487 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 ZBTB8OSQ8IWT0 167 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 SYCE1Q8N0S2 351 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 NFU1Q9UMS0 254 aa13.46□□□□□ -0.25
SMARCA4-208ENST00000585799 CALCAP01258 141 aa13.46□□□□□ -0.26
SMARCA4-208ENST00000585799 H2AFXP16104 143 aaPredicted RBP13.46□□□□□ -0.26
SMARCA4-208ENST00000585799 HPDP32754 393 aaPredicted RBP13.46□□□□□ -0.26
SMARCA4-208ENST00000585799 STAT5BP51692 787 aa13.46□□□□□ -0.26
SMARCA4-208ENST00000585799 SF3A3Q12874 501 aaKnown RBP eCLIP13.46□□□□□ -0.263e-6■■■■■ 27.6
SMARCA4-208ENST00000585799 TTC19Q6DKK2 380 aaPredicted RBP13.46□□□□□ -0.26
SMARCA4-208ENST00000585799 RHPN2Q8IUC4 686 aa13.46□□□□□ -0.26
SMARCA4-208ENST00000585799 NAGPAQ9UK23 515 aa13.46□□□□□ -0.26
SMARCA4-208ENST00000585799 CCNE2O96020 404 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 CTNNA2P26232 953 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 CDR1P51861 262 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 ZCWPW2Q504Y3 356 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 TRAPPC11Q7Z392 1133 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 ARMC9Q7Z3E5 817 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 RIN2Q8WYP3 895 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 RBM12Q9NTZ6 932 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 AKT3Q9Y243 479 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 CD2APQ9Y5K6 639 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 FRMPD4Q14CM0 1322 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 THSD7AQ9UPZ6 1657 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 TLR2O60603 784 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 CSDE1O75534 798 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 TMOD1P28289 359 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 CCDC114Q96M63 670 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 LAMB2P55268 1798 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 CCDC66A2RUB6 948 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 ANKRD63C9JTQ0 380 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 PDE2AO00408 941 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 XKR3Q5GH77 459 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 CCDC60Q8IWA6 550 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 SMAP1Q8IYB5 467 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 UBL4BQ8N7F7 174 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 ZSWIM2Q8NEG5 633 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 STK33Q9BYT3 514 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 ZNF446Q9NWS9 450 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 TBX20Q9UMR3 447 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 UBIAD1Q9Y5Z9 338 aa13.45□□□□□ -0.26
SMARCA4-208ENST00000585799 WNK3Q9BYP7 1800 aa13.44□□□□□ -0.26
SMARCA4-208ENST00000585799 IRF6O14896 467 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms