RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 CASP5P51878 434 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 ADKP55263 362 aaKnown RBP11.39□□□□□ -0.59
LIG3-203ENST00000585370 ZBED6P86452 979 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 GTF2BQ00403 316 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 SP2Q02086 613 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 TTLL4Q14679 1199 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 SNX17Q15036 470 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 TRIM60Q495X7 471 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 DNTTIP2Q5QJE6 756 aaKnown RBP11.39□□□□□ -0.59
LIG3-203ENST00000585370 CELF3Q5SZQ8 465 aaKnown RBP11.39□□□□□ -0.59
LIG3-203ENST00000585370 C12orf56Q8IXR9 622 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 SYCP3Q8IZU3 236 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 DAW1Q8N136 415 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 CCAR2Q8N163 923 aaKnown RBP11.39□□□□□ -0.59
LIG3-203ENST00000585370 MSL3Q8N5Y2 521 aaKnown RBP11.39□□□□□ -0.59
LIG3-203ENST00000585370 SCFD2Q8WU76 684 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 KCNN1Q92952 543 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 IFT74Q96LB3 600 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 TINF2Q9BSI4 451 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 NUCKS1Q9H1E3 243 aaKnown RBP11.39□□□□□ -0.59
LIG3-203ENST00000585370 ATP6V0A4Q9HBG4 840 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 VTA1Q9NP79 307 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 PDLIM7Q9NR12 457 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 CYP26B1Q9NR63 512 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 DMAC2Q9NW81 257 aa11.39□□□□□ -0.59
LIG3-203ENST00000585370 ZNHIT6Q9NWK9 470 aaKnown RBP11.39□□□□□ -0.59
LIG3-203ENST00000585370 ARMCX3Q9UH62 379 aaPredicted RBP11.39□□□□□ -0.59
LIG3-203ENST00000585370 GSTTP1A0A1W2PQM5 241 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 KBTBD13C9JR72 458 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 DLL1O00548 723 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 MAPK13O15264 365 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 TGFB1I1O43294 461 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 GAS2O43903 313 aaKnown RBP11.38□□□□□ -0.59
LIG3-203ENST00000585370 ZNF862O60290 1169 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 OATP04181 439 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 ZNF865P0CJ78 1059 aaPredicted RBP11.38□□□□□ -0.59
LIG3-203ENST00000585370 TRIM21P19474 475 aaKnown RBP11.38□□□□□ -0.59
LIG3-203ENST00000585370 KRT9P35527 623 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 STAT5BP51692 787 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 TERF1P54274 439 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 NCKAP1LP55160 1127 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 PRKCEQ02156 737 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 DMP1Q13316 513 aaPredicted RBP11.38□□□□□ -0.59
LIG3-203ENST00000585370 PPP2R5AQ15172 486 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 SYCP1Q15431 976 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 FAM102BQ5T8I3 360 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 UTP14CQ5TAP6 766 aaKnown RBP11.38□□□□□ -0.59
LIG3-203ENST00000585370 CYP26C1Q6V0L0 522 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 PLPPR4Q7Z2D5 763 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 HAUS6Q7Z4H7 955 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 TMEM139Q8IV31 216 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 CCDC60Q8IWA6 550 aaPredicted RBP11.38□□□□□ -0.59
LIG3-203ENST00000585370 CPLX3Q8WVH0 158 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 FGD4Q96M96 766 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 PCMTD1Q96MG8 357 aaPredicted RBP11.38□□□□□ -0.59
LIG3-203ENST00000585370 JPH2Q9BR39 696 aaPredicted RBP11.38□□□□□ -0.59
LIG3-203ENST00000585370 AZI2Q9H6S1 392 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 PRKAG2Q9UGJ0 569 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 STXBP5LQ9Y2K9 1186 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 FRMD4BQ9Y2L6 1034 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 DAAM1Q9Y4D1 1078 aa11.38□□□□□ -0.59
LIG3-203ENST00000585370 RBM47A0AV96 593 aaKnown RBP11.37□□□□□ -0.59
LIG3-203ENST00000585370 TRIM43BA6NCK2 446 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 K7ENM7 598 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 LGR5O75473 907 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 GGPS1O95749 300 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 PGK1P00558 417 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 RARBP10826 455 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 NPEPPSP55786 919 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 CDK17Q00537 523 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 LAMC2Q13753 1193 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 PTPN14Q15678 1187 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 C1orf53Q5VUE5 145 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 CCDC62Q6P9F0 684 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 MAMDC4Q6UXC1 1216 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 DHX37Q8IY37 1157 aaKnown RBP11.37□□□□□ -0.59
LIG3-203ENST00000585370 BADQ92934 168 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 TRIM43Q96BQ3 446 aaPredicted RBP11.37□□□□□ -0.59
LIG3-203ENST00000585370 DNAJC7Q99615 494 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 SMARCAD1Q9H4L7 1026 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 XPNPEP3Q9NQH7 507 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 KMT5AQ9NQR1 393 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 ABHD10Q9NUJ1 306 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 SEPT9Q9UHD8 586 aaPredicted RBP11.37□□□□□ -0.59
LIG3-203ENST00000585370 PHF24Q9UPV7 400 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 SIK3Q9Y2K2 1263 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 KIAA1217Q5T5P2 1943 aa11.37□□□□□ -0.59
LIG3-203ENST00000585370 SPTBN5Q9NRC6 3674 aaKnown RBP11.37□□□□□ -0.59
LIG3-203ENST00000585370 PHLPP2Q6ZVD8 1323 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 TTC26A0AVF1 554 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 GTPBP10A4D1E9 387 aaKnown RBP11.36□□□□□ -0.59
LIG3-203ENST00000585370 NOP56O00567 594 aaKnown RBP11.36□□□□□ -0.59
LIG3-203ENST00000585370 KIAA0391O15091 583 aaKnown RBP11.36□□□□□ -0.59
LIG3-203ENST00000585370 AFPP02771 609 aaKnown RBP11.36□□□□□ -0.59
LIG3-203ENST00000585370 TXNP10599 105 aaKnown RBP11.36□□□□□ -0.59
LIG3-203ENST00000585370 ITGB8P26012 769 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 HNRNPH3P31942 346 aaKnown RBP11.36□□□□□ -0.59
LIG3-203ENST00000585370 PEX3P56589 373 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 SP4Q02446 784 aa11.36□□□□□ -0.59
LIG3-203ENST00000585370 TLE2Q04725 743 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms