RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 C11orf96Q7Z7L8 435 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 ZC3H7AQ8IWR0 971 aaKnown RBP2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 SYNE4Q8N205 404 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 ACRBPQ8NEB7 543 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 ST13P5Q8NFI4 369 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 MAGEB10Q96LZ2 347 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 SLC9A7Q96T83 725 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 HAUS7Q99871 368 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 G6PC3Q9BUM1 346 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 BTG4Q9NY30 223 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 PCDHB10Q9UN67 800 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 DOT1LQ8TEK3 1739 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 TRBV23-1A0A0A0MS06 115 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 A0A1W2PPC1 479 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 ORC4O43929 436 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 PDE8AO60658 829 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 SNUPNO95149 360 aaKnown RBP2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 PPM1FP49593 454 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 IL2P60568 153 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 MAN2A1Q16706 1144 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 RUFY4Q6ZNE9 571 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 PNMA8AQ86V59 439 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 ZDHHC14Q8IZN3 488 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 TCP11L2Q8N4U5 519 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 OR2W6PQ8NHA6 318 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 DCAF4Q8WV16 495 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 CFAP53Q96M91 514 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 NMRK2Q9NPI5 230 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 SFMBT1Q9UHJ3 866 aa2.36□□□□□ -2.03
SMCHD1-211ENST00000584897 SSC5DA1L4H1 1573 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 FER1L6Q2WGJ9 1857 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 HTATSF1O43719 755 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 DIAPH1O60610 1272 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 KPNA6O60684 536 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 ASGR2P07307 311 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 EFEMP1Q12805 493 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 PUM1Q14671 1186 aaKnown RBP eCLIP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 RGL3Q3MIN7 710 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 DCAF15Q66K64 600 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 SPATC1Q76KD6 591 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 DDX42Q86XP3 938 aaKnown RBP eCLIP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 CHPFQ8IZ52 775 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 TTLL11Q8NHH1 800 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 WDR66Q8TBY9 1149 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 FNIP1Q8TF40 1166 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 SGPP1Q9BX95 441 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 TMX4Q9H1E5 349 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 GCM1Q9NP62 436 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 ZNF646O15015 1829 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 MAP2P11137 1827 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 PAPPA2Q9BXP8 1791 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 CEP350Q5VT06 3117 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 IBTKQ9P2D0 1353 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 OTOL1A6NHN0 477 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 C1QTNF3-AMACRE9PGA6 284 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 H0Y858 1186 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 H0Y8X5 98 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 SUSD5O60279 629 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 HIP1RO75146 1068 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 KCNH1O95259 989 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 ADH4P08319 380 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 PYGMP11217 842 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 LMOD3Q0VAK6 560 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 SSPNQ14714 243 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 PRKD1Q15139 912 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 RALBP1Q15311 655 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 DPY19L1Q2PZI1 675 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 TDRD10Q5VZ19 366 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 KRT28Q7Z3Y7 464 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 KRT26Q7Z3Y9 468 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 IFNL3Q8IZI9 196 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 ADAMTS17Q8TE56 1095 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 BRF1Q92994 677 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 ZNF512BQ96KM6 892 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 FAM193BQ96PV7 902 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 AARSD1Q9BTE6 412 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 CARD11Q9BXL7 1154 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 CLDND1Q9NY35 253 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 SCN11AQ9UI33 1791 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 LOC102724159A0A0B4J2E5 919 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 B4E1Z4 1266 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 K7ESF4 209 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 THBDP07204 575 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 INSRRP14616 1297 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 TMPRSS15P98073 1019 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 MAP4K2Q12851 820 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 RTP5Q14D33 572 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 PWP2Q15269 919 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 TKFCQ3LXA3 575 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 CFAP100Q494V2 611 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 NSMFQ6X4W1 530 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 CEP68Q76N32 757 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 POLNQ7Z5Q5 900 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 DDX53Q86TM3 631 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 SLC17A8Q8NDX2 589 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 PAWRQ96IZ0 340 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 RPS6KC1Q96S38 1066 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 KLHL25Q9H0H3 589 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 VPS11Q9H270 941 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 SLITRK6Q9H5Y7 841 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms