RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 CLUL1Q15846 466 aa23.07■■□□□ 1.28
TOP3A-218ENST00000584669 FAM178BQ8IXR5 827 aa23.07■■□□□ 1.28
TOP3A-218ENST00000584669 KLHL23Q8NBE8 558 aa23.07■■□□□ 1.28
TOP3A-218ENST00000584669 SNX29Q8TEQ0 813 aa23.07■■□□□ 1.28
TOP3A-218ENST00000584669 KHSRPQ92945 711 aaKnown RBP eCLIP23.07■■□□□ 1.283e-8■■■■□ 22.5
TOP3A-218ENST00000584669 INO80BQ9C086 356 aaPredicted RBP23.07■■□□□ 1.28
TOP3A-218ENST00000584669 MINDY3Q9H8M7 445 aa23.07■■□□□ 1.28
TOP3A-218ENST00000584669 XIRP2A4UGR9 3374 aa23.07■■□□□ 1.28
TOP3A-218ENST00000584669 MUC3AQ02505 3323 aa23.06■■□□□ 1.28
TOP3A-218ENST00000584669 ASAP2O43150 1006 aa23.06■■□□□ 1.28
TOP3A-218ENST00000584669 NCK2O43639 380 aa23.06■■□□□ 1.28
TOP3A-218ENST00000584669 ITGB1P05556 798 aa23.06■■□□□ 1.28
TOP3A-218ENST00000584669 SFPQP23246 707 aaKnown RBP eCLIP23.06■■□□□ 1.28
TOP3A-218ENST00000584669 ARL2P36404 184 aa23.06■■□□□ 1.28
TOP3A-218ENST00000584669 FAM189BP81408 668 aa23.06■■□□□ 1.28
TOP3A-218ENST00000584669 MAEAQ7L5Y9 396 aa23.06■■□□□ 1.28
TOP3A-218ENST00000584669 HSCBQ8IWL3 235 aa23.06■■□□□ 1.28
TOP3A-218ENST00000584669 GJD3Q8N144 294 aa23.06■■□□□ 1.28
TOP3A-218ENST00000584669 RNF149Q8NC42 400 aa23.06■■□□□ 1.28
TOP3A-218ENST00000584669 ASAP3Q8TDY4 903 aa23.06■■□□□ 1.28
TOP3A-218ENST00000584669 GPRC5CQ9NQ84 441 aa23.06■■□□□ 1.28
TOP3A-218ENST00000584669 DDX19AQ9NUU7 478 aaKnown RBP23.06■■□□□ 1.28
TOP3A-218ENST00000584669 KIAA1024Q9UPX6 916 aa23.06■■□□□ 1.28
TOP3A-218ENST00000584669 FAM50BQ9Y247 325 aa23.06■■□□□ 1.28
TOP3A-218ENST00000584669 VWA3AA6NCI4 1184 aa23.05■■□□□ 1.28
TOP3A-218ENST00000584669 MUTP22033 750 aa23.05■■□□□ 1.28
TOP3A-218ENST00000584669 GTF2F1P35269 517 aaKnown RBP eCLIP23.05■■□□□ 1.28
TOP3A-218ENST00000584669 RESTQ13127 1097 aa23.05■■□□□ 1.28
TOP3A-218ENST00000584669 FAM102BQ5T8I3 360 aa23.05■■□□□ 1.28
TOP3A-218ENST00000584669 CATSPER4Q7RTX7 472 aa23.05■■□□□ 1.28
TOP3A-218ENST00000584669 SRGAP1Q7Z6B7 1085 aa23.05■■□□□ 1.28
TOP3A-218ENST00000584669 P2RX5Q93086 422 aa23.05■■□□□ 1.28
TOP3A-218ENST00000584669 MMTAG2Q9BU76 263 aaKnown RBP23.05■■□□□ 1.28
TOP3A-218ENST00000584669 POLR3FQ9H1D9 316 aaPredicted RBP23.05■■□□□ 1.28
TOP3A-218ENST00000584669 RNF216Q9NWF9 866 aaPredicted RBP23.05■■□□□ 1.28
TOP3A-218ENST00000584669 ARHGEF35A5YM69 484 aa23.04■■□□□ 1.28
TOP3A-218ENST00000584669 FGFR1P11362 822 aa23.04■■□□□ 1.28
TOP3A-218ENST00000584669 GLRA2P23416 452 aa23.04■■□□□ 1.28
TOP3A-218ENST00000584669 DNAJB1P25685 340 aa23.04■■□□□ 1.28
TOP3A-218ENST00000584669 CAPSQ13938 189 aa23.04■■□□□ 1.28
TOP3A-218ENST00000584669 MXD4Q14582 209 aaPredicted RBP23.04■■□□□ 1.28
TOP3A-218ENST00000584669 COL19A1Q14993 1142 aa23.04■■□□□ 1.28
TOP3A-218ENST00000584669 NAALADL2Q58DX5 795 aa23.04■■□□□ 1.28
TOP3A-218ENST00000584669 PADI6Q6TGC4 694 aa23.04■■□□□ 1.28
TOP3A-218ENST00000584669 ECHDC2Q86YB7 292 aa23.04■■□□□ 1.28
TOP3A-218ENST00000584669 SPPL3Q8TCT6 385 aa23.04■■□□□ 1.28
TOP3A-218ENST00000584669 PPP2R3CQ969Q6 453 aa23.04■■□□□ 1.28
TOP3A-218ENST00000584669 ELAC1Q9H777 363 aaKnown RBP23.04■■□□□ 1.28
TOP3A-218ENST00000584669 TMEM161AQ9NX61 479 aa23.04■■□□□ 1.28
TOP3A-218ENST00000584669 MTMR6Q9Y217 621 aa23.04■■□□□ 1.28
TOP3A-218ENST00000584669 PIN4Q9Y237 131 aaKnown RBP23.04■■□□□ 1.28
TOP3A-218ENST00000584669 FAM86C2PA6NEL3 165 aa23.03■■□□□ 1.28
TOP3A-218ENST00000584669 CAMK1Q14012 370 aa23.03■■□□□ 1.28
TOP3A-218ENST00000584669 SF3A1Q15459 793 aaKnown RBP23.03■■□□□ 1.28
TOP3A-218ENST00000584669 TMEM31Q5JXX7 168 aa23.03■■□□□ 1.28
TOP3A-218ENST00000584669 KRT79Q5XKE5 535 aa23.03■■□□□ 1.28
TOP3A-218ENST00000584669 ARL6IP4Q66PJ3 421 aaKnown RBP23.03■■□□□ 1.28
TOP3A-218ENST00000584669 FAM173BQ6P4H8 233 aa23.03■■□□□ 1.28
TOP3A-218ENST00000584669 POF1BQ8WVV4 589 aa23.03■■□□□ 1.28
TOP3A-218ENST00000584669 BHMT2Q9H2M3 363 aa23.03■■□□□ 1.28
TOP3A-218ENST00000584669 RNF19AQ9NV58 838 aa23.03■■□□□ 1.28
TOP3A-218ENST00000584669 HCSTQ9UBK5 93 aa23.03■■□□□ 1.28
TOP3A-218ENST00000584669 PCDHB12Q9Y5F1 795 aa23.03■■□□□ 1.28
TOP3A-218ENST00000584669 STK24Q9Y6E0 443 aa23.03■■□□□ 1.28
TOP3A-218ENST00000584669 LINC01565O15544 149 aa23.02■■□□□ 1.28
TOP3A-218ENST00000584669 IRS1P35568 1242 aa23.02■■□□□ 1.28
TOP3A-218ENST00000584669 LTBRP36941 435 aa23.02■■□□□ 1.28
TOP3A-218ENST00000584669 PHKA2P46019 1235 aa23.02■■□□□ 1.28
TOP3A-218ENST00000584669 PTENP60484 403 aa23.02■■□□□ 1.28
TOP3A-218ENST00000584669 DLX2Q07687 328 aaPredicted RBP23.02■■□□□ 1.28
TOP3A-218ENST00000584669 RNF169Q8NCN4 708 aa23.02■■□□□ 1.28
TOP3A-218ENST00000584669 MCPH1Q8NEM0 835 aa23.02■■□□□ 1.28
TOP3A-218ENST00000584669 CHST12Q9NRB3 414 aa23.02■■□□□ 1.28
TOP3A-218ENST00000584669 AAASQ9NRG9 546 aa23.02■■□□□ 1.28
TOP3A-218ENST00000584669 AGPAT5Q9NUQ2 364 aa23.02■■□□□ 1.28
TOP3A-218ENST00000584669 DACT1Q9NYF0 836 aa23.02■■□□□ 1.28
TOP3A-218ENST00000584669 A0A0U1RQF3 1178 aa23.01■■□□□ 1.27
TOP3A-218ENST00000584669 E9PMD0 336 aa23.01■■□□□ 1.27
TOP3A-218ENST00000584669 STX6O43752 255 aa23.01■■□□□ 1.27
TOP3A-218ENST00000584669 ATF7P17544 494 aaPredicted RBP23.01■■□□□ 1.27
TOP3A-218ENST00000584669 CYP11B2P19099 503 aa23.01■■□□□ 1.27
TOP3A-218ENST00000584669 NDUFV1P49821 464 aa23.01■■□□□ 1.27
TOP3A-218ENST00000584669 TFDP1Q14186 410 aa23.01■■□□□ 1.27
TOP3A-218ENST00000584669 ZRSR1Q15695 479 aaKnown RBP23.01■■□□□ 1.27
TOP3A-218ENST00000584669 CTC1Q2NKJ3 1217 aa23.01■■□□□ 1.27
TOP3A-218ENST00000584669 TWF2Q6IBS0 349 aaKnown RBP23.01■■□□□ 1.27
TOP3A-218ENST00000584669 KCNK18Q7Z418 384 aa23.01■■□□□ 1.27
TOP3A-218ENST00000584669 ADGRD2Q7Z7M1 963 aa23.01■■□□□ 1.27
TOP3A-218ENST00000584669 THNSL1Q8IYQ7 743 aa23.01■■□□□ 1.27
TOP3A-218ENST00000584669 MICAL1Q8TDZ2 1067 aa23.01■■□□□ 1.27
TOP3A-218ENST00000584669 LRFN3Q9BTN0 628 aa23.01■■□□□ 1.27
TOP3A-218ENST00000584669 POLD4Q9HCU8 107 aa23.01■■□□□ 1.27
TOP3A-218ENST00000584669 PCDHGC5Q9Y5F6 944 aa23.01■■□□□ 1.27
TOP3A-218ENST00000584669 CLIC4Q9Y696 253 aa23.01■■□□□ 1.27
TOP3A-218ENST00000584669 TBX10O75333 385 aa23■■□□□ 1.27
TOP3A-218ENST00000584669 GRIN1Q05586 938 aa23■■□□□ 1.27
TOP3A-218ENST00000584669 RBM23Q86U06 439 aaKnown RBP23■■□□□ 1.27
TOP3A-218ENST00000584669 ZNF598Q86UK7 904 aaKnown RBP23■■□□□ 1.27
TOP3A-218ENST00000584669 IFNLR1Q8IU57 520 aaPredicted RBP23■■□□□ 1.27
TOP3A-218ENST00000584669 BSNDQ8WZ55 320 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms