RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CPB2Q96IY4 423 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 KCTD10Q9H3F6 313 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 BCCIPQ9P287 314 aaKnown RBP eCLIP11.18□□□□□ -0.62
RFFL-212ENST00000584655 CDK5RAP2Q96SN8 1893 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 TACC1O75410 805 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 WEE2P0C1S8 567 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 MXI1P50539 228 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 BEX3Q00994 111 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 SEMA3FQ13275 785 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.17□□□□□ -0.62
RFFL-212ENST00000584655 DPH5Q9H2P9 285 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 AFG3L2Q9Y4W6 797 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 SAR1BQ9Y6B6 198 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 PDHXO00330 501 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 ADRB2P07550 413 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 UBA1P22314 1058 aaKnown RBP11.17□□□□□ -0.62
RFFL-212ENST00000584655 STAT1P42224 750 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 ZNF157P51786 506 aaPredicted RBP11.17□□□□□ -0.62
RFFL-212ENST00000584655 TRADDQ15628 312 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 TRIP13Q15645 432 aaPredicted RBP11.17□□□□□ -0.62
RFFL-212ENST00000584655 ZNF571Q7Z3V5 609 aaPredicted RBP11.17□□□□□ -0.62
RFFL-212ENST00000584655 VSIG10LQ86VR7 867 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 ANKRD13AQ8IZ07 590 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 CPA5Q8WXQ8 436 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 TYW1Q9NV66 732 aaKnown RBP11.17□□□□□ -0.62
RFFL-212ENST00000584655 ADGRA3Q8IWK6 1321 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 PLIN4Q96Q06 1357 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 TNFSF9P41273 254 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 ARMC9Q7Z3E5 817 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 CCDC33Q8N5R6 958 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 AFG1LQ8WV93 481 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 SLC35C1Q96A29 364 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 ERO1AQ96HE7 468 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 CEP89Q96ST8 783 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 PTPN22Q9Y2R2 807 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 CASZ1Q86V15 1759 aa11.17□□□□□ -0.62
RFFL-212ENST00000584655 DOCK2Q92608 1830 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 DHX15O43143 795 aaKnown RBP11.16□□□□□ -0.62
RFFL-212ENST00000584655 PSMC4P43686 418 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 FKBP1AP62942 108 aaKnown RBP11.16□□□□□ -0.62
RFFL-212ENST00000584655 NFX1Q12986 1120 aaKnown RBP11.16□□□□□ -0.62
RFFL-212ENST00000584655 SNX1Q13596 522 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 KIZQ2M2Z5 673 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 DDX42Q86XP3 938 aaKnown RBP eCLIP11.16□□□□□ -0.62
RFFL-212ENST00000584655 RBM46Q8TBY0 533 aaKnown RBP11.16□□□□□ -0.62
RFFL-212ENST00000584655 PRPF31Q8WWY3 499 aaKnown RBP11.16□□□□□ -0.62
RFFL-212ENST00000584655 TAF4BQ92750 862 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 NAP1L4Q99733 375 aaKnown RBP11.16□□□□□ -0.62
RFFL-212ENST00000584655 ECM29Q5VYK3 1845 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 PDE2AO00408 941 aaPredicted RBP11.16□□□□□ -0.62
RFFL-212ENST00000584655 PSAPP07602 524 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 ARHGAP25P42331 645 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 NOVP48745 357 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 VAMP7P51809 220 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 SNRNP35Q16560 246 aaKnown RBP11.16□□□□□ -0.62
RFFL-212ENST00000584655 CAPN12Q6ZSI9 719 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 ATP6V0A1Q93050 837 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 HAUS1Q96CS2 278 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 PNKPQ96T60 521 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 FAM107BQ9H098 131 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 KLK14Q9P0G3 267 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 MYH7BA7E2Y1 1941 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 SYNJ2BP-COX16A0A087WUM0 186 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.16□□□□□ -0.62
RFFL-212ENST00000584655 SOWAHBA6NEL2 793 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 TRAF1Q13077 416 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 PDXDC1Q6P996 788 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 STXBP4Q6ZWJ1 553 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 OTUD6AQ7L8S5 288 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 SMAP1Q8IYB5 467 aaPredicted RBP11.16□□□□□ -0.62
RFFL-212ENST00000584655 MSTO1Q9BUK6 570 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 INTS2Q9H0H0 1204 aaKnown RBP11.16□□□□□ -0.62
RFFL-212ENST00000584655 COX16Q9P0S2 106 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 SIK3Q9Y2K2 1263 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 LY75O60449 1722 aa11.16□□□□□ -0.62
RFFL-212ENST00000584655 XIRP2A4UGR9 3374 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 GOLGA8SH3BPF8 625 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 MAP3K6O95382 1288 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 GTF2F1P35269 517 aaKnown RBP eCLIP11.15□□□□□ -0.62
RFFL-212ENST00000584655 PBX1P40424 430 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 FMO5P49326 533 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 NLRP11P59045 1033 aaKnown RBP11.15□□□□□ -0.62
RFFL-212ENST00000584655 SLC47A2Q86VL8 602 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 CCDC25Q86WR0 208 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 TRIM59Q8IWR1 403 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 XXYLT1Q8NBI6 393 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 ASAP3Q8TDY4 903 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 LRRN4Q8WUT4 740 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 NLRP7Q8WX94 980 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 KRT12Q99456 494 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 HEMGNQ9BXL5 484 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 NOL4O94818 638 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 SGPL1O95470 568 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 EMC2Q15006 297 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 HP1BP3Q5SSJ5 553 aaPredicted RBP11.15□□□□□ -0.62
RFFL-212ENST00000584655 GOLGA1Q92805 767 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 ACCSQ96QU6 501 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 ZIC5Q96T25 663 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 TRIM7Q9C029 511 aa11.15□□□□□ -0.62
RFFL-212ENST00000584655 F5H423 210 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms