RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 SPPL3Q8TCT6 385 aa22.69■■□□□ 1.22
SS18-224ENST00000584083 HELQQ8TDG4 1101 aa22.69■■□□□ 1.22
SS18-224ENST00000584083 TRAIPQ9BWF2 469 aa22.69■■□□□ 1.22
SS18-224ENST00000584083 FAM105AQ9NUU6 356 aa22.69■■□□□ 1.22
SS18-224ENST00000584083 STK24Q9Y6E0 443 aa22.69■■□□□ 1.22
SS18-224ENST00000584083 INO80B-WBP1J3KQ70 363 aa22.68■■□□□ 1.22
SS18-224ENST00000584083 LAG3P18627 525 aa22.68■■□□□ 1.22
SS18-224ENST00000584083 MUTP22033 750 aa22.68■■□□□ 1.22
SS18-224ENST00000584083 GLRA2P23416 452 aa22.68■■□□□ 1.22
SS18-224ENST00000584083 PRPHP41219 470 aa22.68■■□□□ 1.22
SS18-224ENST00000584083 RAB27AP51159 221 aa22.68■■□□□ 1.22
SS18-224ENST00000584083 CAPSQ13938 189 aa22.68■■□□□ 1.22
SS18-224ENST00000584083 THNSL1Q8IYQ7 743 aa22.68■■□□□ 1.22
SS18-224ENST00000584083 LRRC43Q8N309 656 aa22.68■■□□□ 1.22
SS18-224ENST00000584083 COLGALT1Q8NBJ5 622 aa22.68■■□□□ 1.22
SS18-224ENST00000584083 MCPH1Q8NEM0 835 aa22.68■■□□□ 1.22
SS18-224ENST00000584083 SNX29Q8TEQ0 813 aa22.68■■□□□ 1.22
SS18-224ENST00000584083 CWH43Q9H720 699 aa22.68■■□□□ 1.22
SS18-224ENST00000584083 GPRC5CQ9NQ84 441 aa22.68■■□□□ 1.22
SS18-224ENST00000584083 KCNQ1P51787 676 aa22.67■■□□□ 1.22
SS18-224ENST00000584083 POU5F1BQ06416 359 aa22.67■■□□□ 1.22
SS18-224ENST00000584083 NCBP1Q09161 790 aaKnown RBP22.67■■□□□ 1.22
SS18-224ENST00000584083 CSPP1Q1MSJ5 1256 aa22.67■■□□□ 1.22
SS18-224ENST00000584083 PADI6Q6TGC4 694 aa22.67■■□□□ 1.22
SS18-224ENST00000584083 LRRC55Q6ZSA7 311 aa22.67■■□□□ 1.22
SS18-224ENST00000584083 EP400NLQ6ZTU2 488 aa22.67■■□□□ 1.22
SS18-224ENST00000584083 IGSF22Q8N9C0 903 aa22.67■■□□□ 1.22
SS18-224ENST00000584083 POF1BQ8WVV4 589 aa22.67■■□□□ 1.22
SS18-224ENST00000584083 LPPQ93052 612 aa22.67■■□□□ 1.22
SS18-224ENST00000584083 UBE2ZQ9H832 354 aaPredicted RBP22.67■■□□□ 1.22
SS18-224ENST00000584083 KIAA1024Q9UPX6 916 aa22.67■■□□□ 1.22
SS18-224ENST00000584083 PCDHB2Q9Y5E7 798 aa22.67■■□□□ 1.22
SS18-224ENST00000584083 CUL9Q8IWT3 2517 aa22.66■■□□□ 1.22
SS18-224ENST00000584083 LRRIQ4A6NIV6 560 aa22.66■■□□□ 1.22
SS18-224ENST00000584083 DNAJB1P25685 340 aa22.66■■□□□ 1.22
SS18-224ENST00000584083 IL17AQ16552 155 aa22.66■■□□□ 1.22
SS18-224ENST00000584083 ECM1Q16610 540 aa22.66■■□□□ 1.22
SS18-224ENST00000584083 KRT79Q5XKE5 535 aa22.66■■□□□ 1.22
SS18-224ENST00000584083 PGBD4Q96DM1 585 aa22.66■■□□□ 1.22
SS18-224ENST00000584083 DDX19AQ9NUU7 478 aaKnown RBP22.66■■□□□ 1.22
SS18-224ENST00000584083 VPS37CA5D8V6 355 aaPredicted RBP22.65■■□□□ 1.22
SS18-224ENST00000584083 PP2D1A8MPX8 630 aa22.65■■□□□ 1.22
SS18-224ENST00000584083 ZNF623O75123 536 aa22.65■■□□□ 1.22
SS18-224ENST00000584083 FGF18O76093 207 aa22.65■■□□□ 1.22
SS18-224ENST00000584083 CYP11B2P19099 503 aa22.65■■□□□ 1.22
SS18-224ENST00000584083 KCNA5P22460 613 aa22.65■■□□□ 1.22
SS18-224ENST00000584083 HOXA11P31270 313 aaPredicted RBP22.65■■□□□ 1.22
SS18-224ENST00000584083 ATP2C1P98194 919 aaPredicted RBP22.65■■□□□ 1.22
SS18-224ENST00000584083 CAMK1Q14012 370 aa22.65■■□□□ 1.22
SS18-224ENST00000584083 PCBP1Q15365 356 aaKnown RBP eCLIP22.65■■□□□ 1.22
SS18-224ENST00000584083 GLB1LQ6UWU2 654 aa22.65■■□□□ 1.22
SS18-224ENST00000584083 IFNLR1Q8IU57 520 aaPredicted RBP22.65■■□□□ 1.22
SS18-224ENST00000584083 ADAMTS19Q8TE59 1207 aa22.65■■□□□ 1.22
SS18-224ENST00000584083 ZNF558Q96NG5 402 aa22.65■■□□□ 1.22
SS18-224ENST00000584083 MRPL9Q9BYD2 267 aaKnown RBP22.65■■□□□ 1.22
SS18-224ENST00000584083 BHMT2Q9H2M3 363 aa22.65■■□□□ 1.22
SS18-224ENST00000584083 INPP5FQ9Y2H2 1132 aa22.65■■□□□ 1.22
SS18-224ENST00000584083 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.64■■□□□ 1.21
SS18-224ENST00000584083 TSPAN1O60635 241 aa22.64■■□□□ 1.21
SS18-224ENST00000584083 BMP1P13497 986 aa22.64■■□□□ 1.21
SS18-224ENST00000584083 PDCP20941 246 aa22.64■■□□□ 1.21
SS18-224ENST00000584083 CDC25AP30304 524 aa22.64■■□□□ 1.21
SS18-224ENST00000584083 AXLP30530 894 aa22.64■■□□□ 1.21
SS18-224ENST00000584083 UBE3AQ05086 875 aa22.64■■□□□ 1.21
SS18-224ENST00000584083 MBTD1Q05BQ5 628 aa22.64■■□□□ 1.21
SS18-224ENST00000584083 KCNT2Q6UVM3 1135 aa22.64■■□□□ 1.21
SS18-224ENST00000584083 MICAL1Q8TDZ2 1067 aa22.64■■□□□ 1.21
SS18-224ENST00000584083 PPP2R3CQ969Q6 453 aa22.64■■□□□ 1.21
SS18-224ENST00000584083 NFKBIZQ9BYH8 718 aa22.64■■□□□ 1.21
SS18-224ENST00000584083 MEIS3P2A8K0S8 358 aa22.63■■□□□ 1.21
SS18-224ENST00000584083 ZRSR1Q15695 479 aaKnown RBP22.63■■□□□ 1.21
SS18-224ENST00000584083 UBXN11Q5T124 520 aa22.63■■□□□ 1.21
SS18-224ENST00000584083 NOTUMQ6P988 496 aa22.63■■□□□ 1.21
SS18-224ENST00000584083 BRAPQ7Z569 592 aa22.63■■□□□ 1.21
SS18-224ENST00000584083 PABPC5Q96DU9 382 aaKnown RBP22.63■■□□□ 1.21
SS18-224ENST00000584083 CPB2Q96IY4 423 aa22.63■■□□□ 1.21
SS18-224ENST00000584083 IGFLR1Q9H665 355 aa22.63■■□□□ 1.21
SS18-224ENST00000584083 CLDND1Q9NY35 253 aa22.63■■□□□ 1.21
SS18-224ENST00000584083 DNM3Q9UQ16 869 aa22.63■■□□□ 1.21
SS18-224ENST00000584083 VWA3AA6NCI4 1184 aa22.62■■□□□ 1.21
SS18-224ENST00000584083 NCK2O43639 380 aa22.62■■□□□ 1.21
SS18-224ENST00000584083 IRS1P35568 1242 aa22.62■■□□□ 1.21
SS18-224ENST00000584083 PPM1AP35813 382 aa22.62■■□□□ 1.21
SS18-224ENST00000584083 PBX3P40426 434 aa22.62■■□□□ 1.21
SS18-224ENST00000584083 RNASELQ05823 741 aaKnown RBP22.62■■□□□ 1.21
SS18-224ENST00000584083 HYAL1Q12794 435 aa22.62■■□□□ 1.21
SS18-224ENST00000584083 NOMO2Q5JPE7 1267 aa22.62■■□□□ 1.21
SS18-224ENST00000584083 MRPL10Q7Z7H8 261 aaKnown RBP22.62■■□□□ 1.21
SS18-224ENST00000584083 ZBTB8OSQ8IWT0 167 aa22.62■■□□□ 1.21
SS18-224ENST00000584083 RSPH1Q8WYR4 309 aa22.62■■□□□ 1.21
SS18-224ENST00000584083 CCDC51Q96ER9 411 aa22.62■■□□□ 1.21
SS18-224ENST00000584083 SPG21Q9NZD8 308 aa22.62■■□□□ 1.21
SS18-224ENST00000584083 PUF60Q9UHX1 559 aaKnown RBP22.62■■□□□ 1.21
SS18-224ENST00000584083 OFD1O75665 1012 aa22.61■■□□□ 1.21
SS18-224ENST00000584083 ALDH7A1P49419 539 aaKnown RBP22.61■■□□□ 1.21
SS18-224ENST00000584083 KRT17Q04695 432 aa22.61■■□□□ 1.21
SS18-224ENST00000584083 ARL6IP4Q66PJ3 421 aaKnown RBP22.61■■□□□ 1.21
SS18-224ENST00000584083 CNNM3Q8NE01 707 aa22.61■■□□□ 1.21
SS18-224ENST00000584083 URGCPQ8TCY9 931 aa22.61■■□□□ 1.21
SS18-224ENST00000584083 UHRF1Q96T88 793 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms