RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 C12orf76Q8N812 135 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-222ENST00000583732 ZNF579Q8NAF0 562 aaKnown RBP16.97■□□□□ 0.31
SREBF1-222ENST00000583732 TMEM87AQ8NBN3 555 aa16.97■□□□□ 0.31
SREBF1-222ENST00000583732 BCL7CQ8WUZ0 217 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-222ENST00000583732 PHOX2BQ99453 314 aa16.97■□□□□ 0.31
SREBF1-222ENST00000583732 INO80BQ9C086 356 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-222ENST00000583732 ZBP1Q9H171 429 aa16.97■□□□□ 0.31
SREBF1-222ENST00000583732 POMKQ9H5K3 350 aa16.97■□□□□ 0.31
SREBF1-222ENST00000583732 NRDE2Q9H7Z3 1164 aa16.97■□□□□ 0.31
SREBF1-222ENST00000583732 CYP26B1Q9NR63 512 aa16.97■□□□□ 0.31
SREBF1-222ENST00000583732 GJB4Q9NTQ9 266 aa16.97■□□□□ 0.31
SREBF1-222ENST00000583732 TBC1D13Q9NVG8 400 aa16.97■□□□□ 0.31
SREBF1-222ENST00000583732 VAV3Q9UKW4 847 aa16.97■□□□□ 0.31
SREBF1-222ENST00000583732 SKIP12755 728 aa16.96■□□□□ 0.31
SREBF1-222ENST00000583732 QARSP47897 775 aaKnown RBP16.96■□□□□ 0.31
SREBF1-222ENST00000583732 POLGP54098 1239 aaPredicted RBP16.96■□□□□ 0.31
SREBF1-222ENST00000583732 VCPP55072 806 aaKnown RBP16.96■□□□□ 0.31
SREBF1-222ENST00000583732 SCRN1Q12765 414 aa16.96■□□□□ 0.31
SREBF1-222ENST00000583732 BMS1Q14692 1282 aaKnown RBP16.96■□□□□ 0.31
SREBF1-222ENST00000583732 NOMO2Q5JPE7 1267 aa16.96■□□□□ 0.31
SREBF1-222ENST00000583732 NCAPH2Q6IBW4 605 aa16.96■□□□□ 0.31
SREBF1-222ENST00000583732 GALNT17Q6IS24 598 aa16.96■□□□□ 0.31
SREBF1-222ENST00000583732 CES5AQ6NT32 575 aa16.96■□□□□ 0.31
SREBF1-222ENST00000583732 KANK3Q6NY19 840 aa16.96■□□□□ 0.31
SREBF1-222ENST00000583732 TMEM143Q96AN5 459 aa16.96■□□□□ 0.31
SREBF1-222ENST00000583732 CEP170P1Q96L14 293 aa16.96■□□□□ 0.31
SREBF1-222ENST00000583732 JPH2Q9BR39 696 aaPredicted RBP16.96■□□□□ 0.31
SREBF1-222ENST00000583732 TM6SF1Q9BZW5 370 aa16.96■□□□□ 0.31
SREBF1-222ENST00000583732 WRAP73Q9P2S5 460 aaPredicted RBP16.96■□□□□ 0.31
SREBF1-222ENST00000583732 DNAJB4Q9UDY4 337 aa16.96■□□□□ 0.31
SREBF1-222ENST00000583732 COL4A3BPQ9Y5P4 624 aa16.96■□□□□ 0.31
SREBF1-222ENST00000583732 C2CD4DB7Z1M9 353 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 MARCH6O60337 910 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 CCNT1O60563 726 aaKnown RBP16.95■□□□□ 0.3
SREBF1-222ENST00000583732 SRGAP2CP0DJJ0 459 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 EPCAMP16422 314 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 SLC11A1P49279 550 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 PPP2R5CQ13362 524 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 PIK3AP1Q6ZUJ8 805 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 NEK8Q86SG6 692 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 OXER1Q8TDS5 423 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 SLC7A3Q8WY07 619 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 ASIC4Q96FT7 647 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 IGSF21Q96ID5 467 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 PHF20Q9BVI0 1012 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 KCNMB3Q9NPA1 279 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 AGPAT5Q9NUQ2 364 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 NR2E1Q9Y466 385 aa16.95■□□□□ 0.3
SREBF1-222ENST00000583732 B4GALT3O60512 393 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 OFD1O75665 1012 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 CDKL5O76039 1030 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 PDGFBP01127 241 aaPredicted RBP16.94■□□□□ 0.3
SREBF1-222ENST00000583732 SSBP05455 408 aaKnown RBP eCLIP16.94■□□□□ 0.3
SREBF1-222ENST00000583732 GALTP07902 379 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 RAB27AP51159 221 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 PTPN5P54829 565 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 KREMEN2Q8NCW0 462 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 URGCPQ8TCY9 931 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 PGBD4Q96DM1 585 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 LXNQ9BS40 222 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 TRAIPQ9BWF2 469 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 ADAM7Q9H2U9 754 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 MINDY3Q9H8M7 445 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 IFT122Q9HBG6 1241 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 PCDHB2Q9Y5E7 798 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 DENND4AQ7Z401 1863 aa16.94■□□□□ 0.3
SREBF1-222ENST00000583732 FAM205CA6NFA0 338 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 SPDYE4A6NLX3 237 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 EPB41L2O43491 1005 aaKnown RBP16.93■□□□□ 0.3
SREBF1-222ENST00000583732 DKC1O60832 514 aaKnown RBP eCLIP16.93■□□□□ 0.35e-7■■■■□ 19.3
SREBF1-222ENST00000583732 CTSAP10619 480 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 XBP1P17861 261 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 MTHFRP42898 656 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 CYP4A11Q02928 519 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 ITIH3Q06033 890 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 DDX53Q86TM3 631 aaKnown RBP16.93■□□□□ 0.3
SREBF1-222ENST00000583732 ZNF280BQ86YH2 543 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 FAM177A1Q8N128 213 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-222ENST00000583732 FEZF2Q8TBJ5 459 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 PRPF31Q8WWY3 499 aaKnown RBP16.93■□□□□ 0.3
SREBF1-222ENST00000583732 PSPC1Q8WXF1 523 aaKnown RBP16.93■□□□□ 0.3
SREBF1-222ENST00000583732 DYDC2Q96IM9 177 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 RIPOR3Q96MK2 946 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 FAM20AQ96MK3 541 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 NECTIN4Q96NY8 510 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 VN1R3Q9BXE9 311 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 SMOC2Q9H3U7 446 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 DZANK1Q9NVP4 752 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 RGL1Q9NZL6 768 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 STK36Q9NRP7 1315 aa16.93■□□□□ 0.3
SREBF1-222ENST00000583732 DDHD2O94830 711 aa16.92■□□□□ 0.3
SREBF1-222ENST00000583732 P4HBP07237 508 aaKnown RBP16.92■□□□□ 0.3
SREBF1-222ENST00000583732 GCFC2P16383 781 aaKnown RBP16.92■□□□□ 0.3
SREBF1-222ENST00000583732 YWHABP31946 246 aaKnown RBP16.92■□□□□ 0.3
SREBF1-222ENST00000583732 AFF1P51825 1210 aaKnown RBP16.92■□□□□ 0.3
SREBF1-222ENST00000583732 LAMTOR4Q0VGL1 99 aa16.92■□□□□ 0.3
SREBF1-222ENST00000583732 TCF15Q12870 199 aa16.92■□□□□ 0.3
SREBF1-222ENST00000583732 CTTNQ14247 550 aaKnown RBP16.92■□□□□ 0.3
SREBF1-222ENST00000583732 EMC2Q15006 297 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms