RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 KIAA1841Q6NSI8 718 aa6.03□□□□□ -1.44
SMCHD1-208ENST00000583344 TIGD7Q6NT04 549 aaPredicted RBP6.03□□□□□ -1.44
SMCHD1-208ENST00000583344 RPUSD2Q8IZ73 545 aaKnown RBP6.03□□□□□ -1.44
SMCHD1-208ENST00000583344 CMTM4Q8IZR5 234 aa6.03□□□□□ -1.44
SMCHD1-208ENST00000583344 MDGA1Q8NFP4 955 aa6.03□□□□□ -1.44
SMCHD1-208ENST00000583344 NOL10Q9BSC4 688 aaKnown RBP6.03□□□□□ -1.44
SMCHD1-208ENST00000583344 ZSWIM4Q9H7M6 989 aa6.03□□□□□ -1.44
SMCHD1-208ENST00000583344 SYNPO2Q9UMS6 1093 aa6.03□□□□□ -1.44
SMCHD1-208ENST00000583344 ZNF891A8MT65 544 aaPredicted RBP6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 KPNA6O60684 536 aa6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 RAMP2O60895 175 aa6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 CFBP00751 764 aa6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 NPEPPSP55786 919 aa6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 NANOS3P60323 173 aaKnown RBP6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 FSTL1Q12841 308 aa6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 C21orf62-AS1Q17RA5 79 aa6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 RABL3Q5HYI8 236 aa6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 HTR3DQ70Z44 454 aa6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 ULK2Q8IYT8 1036 aa6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 NXPE1Q8N323 547 aa6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 SLC25A43Q8WUT9 341 aaPredicted RBP6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 SREK1Q8WXA9 508 aaKnown RBP6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 UIMC1Q96RL1 719 aa6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 PRRX2Q99811 253 aa6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 TMEM260Q9NX78 707 aa6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 ING3Q9NXR8 418 aa6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 TRPS1Q9UHF7 1281 aa6.02□□□□□ -1.45
SMCHD1-208ENST00000583344 GOLGA6L6A8MZA4 724 aa6.01□□□□□ -1.45
SMCHD1-208ENST00000583344 ELL2O00472 640 aaPredicted RBP6.01□□□□□ -1.45
SMCHD1-208ENST00000583344 MTSS1O43312 755 aa6.01□□□□□ -1.45
SMCHD1-208ENST00000583344 MFAP3LO75121 409 aa6.01□□□□□ -1.45
SMCHD1-208ENST00000583344 IPO13O94829 963 aaKnown RBP6.01□□□□□ -1.45
SMCHD1-208ENST00000583344 PCDH8O95206 1070 aa6.01□□□□□ -1.45
SMCHD1-208ENST00000583344 GAAP10253 952 aa6.01□□□□□ -1.45
SMCHD1-208ENST00000583344 HK1P19367 917 aa6.01□□□□□ -1.45
SMCHD1-208ENST00000583344 MRGPREQ86SM8 312 aa6.01□□□□□ -1.45
SMCHD1-208ENST00000583344 ZNF276Q8N554 614 aa6.01□□□□□ -1.45
SMCHD1-208ENST00000583344 PIK3C3Q8NEB9 887 aa6.01□□□□□ -1.45
SMCHD1-208ENST00000583344 ST8SIA2Q92186 375 aa6.01□□□□□ -1.45
SMCHD1-208ENST00000583344 MAGEC2Q9UBF1 373 aaPredicted RBP6.01□□□□□ -1.45
SMCHD1-208ENST00000583344 ZKSCAN5Q9Y2L8 839 aa6.01□□□□□ -1.45
SMCHD1-208ENST00000583344 GRXCR1A8MXD5 290 aa6□□□□□ -1.45
SMCHD1-208ENST00000583344 FOXN1O15353 648 aa6□□□□□ -1.45
SMCHD1-208ENST00000583344 RFPL3O75679 317 aa6□□□□□ -1.45
SMCHD1-208ENST00000583344 GNAT2P19087 354 aa6□□□□□ -1.45
SMCHD1-208ENST00000583344 TGM1P22735 817 aa6□□□□□ -1.45
SMCHD1-208ENST00000583344 NR4A1P22736 598 aa6□□□□□ -1.45
SMCHD1-208ENST00000583344 PTGS2P35354 604 aa6□□□□□ -1.45
SMCHD1-208ENST00000583344 ZBTB41Q5SVQ8 909 aa6□□□□□ -1.45
SMCHD1-208ENST00000583344 CHTF18Q8WVB6 975 aa6□□□□□ -1.45
SMCHD1-208ENST00000583344 HIST1H2AHQ96KK5 128 aa6□□□□□ -1.45
SMCHD1-208ENST00000583344 HIST1H2AJQ99878 128 aa6□□□□□ -1.45
SMCHD1-208ENST00000583344 MLST8Q9BVC4 326 aa6□□□□□ -1.45
SMCHD1-208ENST00000583344 OSBPL6Q9BZF3 934 aa6□□□□□ -1.45
SMCHD1-208ENST00000583344 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6□□□□□ -1.45
SMCHD1-208ENST00000583344 THG1LQ9NWX6 298 aaKnown RBP6□□□□□ -1.45
SMCHD1-208ENST00000583344 CD2APQ9Y5K6 639 aa6□□□□□ -1.45
SMCHD1-208ENST00000583344 FAM83GA6ND36 823 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 GAS7O60861 476 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 ALDH1A2O94788 518 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 FSBPO95073 299 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 PTTG1IPP53801 180 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 DSG1Q02413 1049 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 COL10A1Q03692 680 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 MAN2A1Q16706 1144 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 LAIR1Q6GTX8 287 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 DNAJC10Q8IXB1 793 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 ZZZ3Q8IYH5 903 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 HAS1Q92839 578 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 ZG16BQ96DA0 208 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 ORAI3Q9BRQ5 295 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 SORCS3Q9UPU3 1222 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 ABCC9O60706 1549 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 MYPNQ86TC9 1320 aa5.99□□□□□ -1.45
SMCHD1-208ENST00000583344 LCHNA4D1U4 455 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 MAFGO15525 162 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 F2P00734 622 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 CD40P25942 277 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 NEK4P51957 841 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 CD69Q07108 199 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 CCDC144BQ3MJ40 725 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 RHOUQ7L0Q8 258 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 CXorf67Q86X51 503 aaPredicted RBP5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 ZNF575Q86XF7 245 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 VRK3Q8IV63 474 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 UNC5BQ8IZJ1 945 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 EFHBQ8N7U6 833 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 CPT1CQ8TCG5 803 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 MTFR1LQ9H019 292 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 MS4A5Q9H3V2 200 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 INTS7Q9NVH2 962 aaKnown RBP5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 IFT57Q9NWB7 429 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 PCDHB6Q9Y5E3 794 aa5.98□□□□□ -1.45
SMCHD1-208ENST00000583344 TMEM191CA6NGB0 347 aa5.97□□□□□ -1.45
SMCHD1-208ENST00000583344 TGM5O43548 720 aa5.97□□□□□ -1.45
SMCHD1-208ENST00000583344 CASRP41180 1078 aa5.97□□□□□ -1.45
SMCHD1-208ENST00000583344 DCAF17Q5H9S7 520 aaPredicted RBP5.97□□□□□ -1.45
SMCHD1-208ENST00000583344 NAIF1Q69YI7 327 aaPredicted RBP5.97□□□□□ -1.45
SMCHD1-208ENST00000583344 APBB1IPQ7Z5R6 666 aaPredicted RBP5.97□□□□□ -1.45
SMCHD1-208ENST00000583344 PPP1R14CQ8TAE6 165 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms