RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 FZD8Q9H461 694 aa23.93■■□□□ 1.42
TSEN54-208ENST00000583173 ODF2LQ9ULJ1 636 aa23.93■■□□□ 1.42
TSEN54-208ENST00000583173 ZBBXA8MT70 800 aa23.92■■□□□ 1.42
TSEN54-208ENST00000583173 GRXCR1A8MXD5 290 aa23.92■■□□□ 1.42
TSEN54-208ENST00000583173 PLS3P13797 630 aa23.92■■□□□ 1.42
TSEN54-208ENST00000583173 FAM187BQ17R55 369 aa23.92■■□□□ 1.42
TSEN54-208ENST00000583173 CNNM4Q6P4Q7 775 aa23.92■■□□□ 1.42
TSEN54-208ENST00000583173 DDX12PQ92771 950 aa23.92■■□□□ 1.42
TSEN54-208ENST00000583173 IFT74Q96LB3 600 aa23.92■■□□□ 1.42
TSEN54-208ENST00000583173 ADAM2Q99965 735 aa23.92■■□□□ 1.42
TSEN54-208ENST00000583173 CCDC113Q9H0I3 377 aa23.92■■□□□ 1.42
TSEN54-208ENST00000583173 GOLPH3LQ9H4A5 285 aa23.92■■□□□ 1.42
TSEN54-208ENST00000583173 LRRIQ4A6NIV6 560 aa23.91■■□□□ 1.42
TSEN54-208ENST00000583173 C9IYK1 514 aa23.91■■□□□ 1.42
TSEN54-208ENST00000583173 ATP2A2P16615 1042 aaKnown RBP23.91■■□□□ 1.42
TSEN54-208ENST00000583173 SFPQP23246 707 aaKnown RBP eCLIP23.91■■□□□ 1.42
TSEN54-208ENST00000583173 NDUFA8P51970 172 aa23.91■■□□□ 1.42
TSEN54-208ENST00000583173 PEX3P56589 373 aa23.91■■□□□ 1.42
TSEN54-208ENST00000583173 CACNB1Q02641 598 aaPredicted RBP23.91■■□□□ 1.42
TSEN54-208ENST00000583173 PPP4R3CPQ6ZMV5 832 aa23.91■■□□□ 1.42
TSEN54-208ENST00000583173 TMEM87AQ8NBN3 555 aa23.91■■□□□ 1.42
TSEN54-208ENST00000583173 FIZ1Q96SL8 496 aa23.91■■□□□ 1.42
TSEN54-208ENST00000583173 SLC9A7Q96T83 725 aa23.91■■□□□ 1.42
TSEN54-208ENST00000583173 TRAIPQ9BWF2 469 aa23.91■■□□□ 1.42
TSEN54-208ENST00000583173 TNMDQ9H2S6 317 aa23.91■■□□□ 1.42
TSEN54-208ENST00000583173 ARHGAP28Q9P2N2 729 aa23.91■■□□□ 1.42
TSEN54-208ENST00000583173 SOX1O00570 391 aaPredicted RBP23.9■■□□□ 1.42
TSEN54-208ENST00000583173 ACTN4O43707 911 aaKnown RBP23.9■■□□□ 1.42
TSEN54-208ENST00000583173 SLFN14P0C7P3 912 aa23.9■■□□□ 1.42
TSEN54-208ENST00000583173 SMAD3P84022 425 aaKnown RBP23.9■■□□□ 1.42
TSEN54-208ENST00000583173 LONRF3Q496Y0 759 aa23.9■■□□□ 1.42
TSEN54-208ENST00000583173 TAS1R3Q7RTX0 852 aa23.9■■□□□ 1.42
TSEN54-208ENST00000583173 CATSPER4Q7RTX7 472 aa23.9■■□□□ 1.42
TSEN54-208ENST00000583173 HERC6Q8IVU3 1022 aa23.9■■□□□ 1.42
TSEN54-208ENST00000583173 PYM1Q9BRP8 204 aaKnown RBP23.9■■□□□ 1.42
TSEN54-208ENST00000583173 C2orf40Q9H1Z8 148 aa23.9■■□□□ 1.42
TSEN54-208ENST00000583173 TMEM134Q9H6X4 195 aa23.9■■□□□ 1.42
TSEN54-208ENST00000583173 AGPAT5Q9NUQ2 364 aa23.9■■□□□ 1.42
TSEN54-208ENST00000583173 KCNG1Q9UIX4 513 aa23.9■■□□□ 1.42
TSEN54-208ENST00000583173 FRMD3A2A2Y4 597 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 INO80B-WBP1J3KQ70 363 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 TSPAN1O60635 241 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 AMHP03971 560 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 KCNJ6P48051 423 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 SLC24A5Q71RS6 500 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 TMCO2Q7Z6W1 182 aaPredicted RBP23.89■■□□□ 1.41
TSEN54-208ENST00000583173 FSIP1Q8NA03 581 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 TMEM161BQ8NDZ6 487 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 ENGASEQ8NFI3 743 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 DEPTORQ8TB45 409 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 MRPS27Q92552 414 aaKnown RBP23.89■■□□□ 1.41
TSEN54-208ENST00000583173 STAMQ92783 540 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 C7orf25Q9BPX7 421 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 KIFC3Q9BVG8 833 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 MAGEF1Q9HAY2 307 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 C1orf112Q9NSG2 853 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 USP25Q9UHP3 1055 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 SERTAD1Q9UHV2 236 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 TTC3P53804 2025 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 MICAL3Q7RTP6 2002 aa23.89■■□□□ 1.41
TSEN54-208ENST00000583173 TTLL13PA6NNM8 815 aa23.88■■□□□ 1.41
TSEN54-208ENST00000583173 GJB5O95377 273 aa23.88■■□□□ 1.41
TSEN54-208ENST00000583173 EDN1P05305 212 aa23.88■■□□□ 1.41
TSEN54-208ENST00000583173 AXLP30530 894 aa23.88■■□□□ 1.41
TSEN54-208ENST00000583173 EFNA5P52803 228 aa23.88■■□□□ 1.41
TSEN54-208ENST00000583173 DMP1Q13316 513 aaPredicted RBP23.88■■□□□ 1.41
TSEN54-208ENST00000583173 DYMQ7RTS9 669 aa23.88■■□□□ 1.41
TSEN54-208ENST00000583173 PARVGQ9HBI0 331 aa23.88■■□□□ 1.41
TSEN54-208ENST00000583173 A0A0U1RQF3 1178 aa23.87■■□□□ 1.41
TSEN54-208ENST00000583173 CCDC169A6NNP5 214 aa23.87■■□□□ 1.41
TSEN54-208ENST00000583173 ACKR2O00590 384 aa23.87■■□□□ 1.41
TSEN54-208ENST00000583173 B4GALT5O43286 388 aa23.87■■□□□ 1.41
TSEN54-208ENST00000583173 ZSCAN20P17040 1043 aaPredicted RBP23.87■■□□□ 1.41
TSEN54-208ENST00000583173 ARF4P18085 180 aaPredicted RBP23.87■■□□□ 1.41
TSEN54-208ENST00000583173 SYKP43405 635 aa23.87■■□□□ 1.41
TSEN54-208ENST00000583173 SARSP49591 514 aaKnown RBP23.87■■□□□ 1.41
TSEN54-208ENST00000583173 NCKAP1LP55160 1127 aa23.87■■□□□ 1.41
TSEN54-208ENST00000583173 HTRA4P83105 476 aaPredicted RBP23.87■■□□□ 1.41
TSEN54-208ENST00000583173 UBXN11Q5T124 520 aa23.87■■□□□ 1.41
TSEN54-208ENST00000583173 ZNF598Q86UK7 904 aaKnown RBP23.87■■□□□ 1.41
TSEN54-208ENST00000583173 ZBTB8OSQ8IWT0 167 aa23.87■■□□□ 1.41
TSEN54-208ENST00000583173 PRIMPOLQ96LW4 560 aa23.87■■□□□ 1.41
TSEN54-208ENST00000583173 TRIM9Q9C026 710 aa23.87■■□□□ 1.41
TSEN54-208ENST00000583173 LRRC27Q9C0I9 530 aa23.87■■□□□ 1.41
TSEN54-208ENST00000583173 KMT5AQ9NQR1 393 aa23.87■■□□□ 1.41
TSEN54-208ENST00000583173 PRMT7Q9NVM4 692 aaPredicted RBP23.87■■□□□ 1.41
TSEN54-208ENST00000583173 LARSQ9P2J5 1176 aaKnown RBP23.87■■□□□ 1.41
TSEN54-208ENST00000583173 A0A1B0GUA9 196 aa23.86■■□□□ 1.41
TSEN54-208ENST00000583173 DENND3A2RUS2 1198 aa23.86■■□□□ 1.41
TSEN54-208ENST00000583173 SLC16A4O15374 487 aa23.86■■□□□ 1.41
TSEN54-208ENST00000583173 ZNF623O75123 536 aa23.86■■□□□ 1.41
TSEN54-208ENST00000583173 RABGGTBP53611 331 aa23.86■■□□□ 1.41
TSEN54-208ENST00000583173 SNW1Q13573 536 aaKnown RBP23.86■■□□□ 1.41
TSEN54-208ENST00000583173 NT5DC1Q5TFE4 455 aa23.86■■□□□ 1.41
TSEN54-208ENST00000583173 MYOCDQ8IZQ8 938 aa23.86■■□□□ 1.41
TSEN54-208ENST00000583173 MYCT1Q8N699 235 aa23.86■■□□□ 1.41
TSEN54-208ENST00000583173 PAGE5Q96GU1 130 aa23.86■■□□□ 1.41
TSEN54-208ENST00000583173 STRA6Q9BX79 667 aa23.86■■□□□ 1.41
TSEN54-208ENST00000583173 PBX4Q9BYU1 374 aa23.86■■□□□ 1.41
TSEN54-208ENST00000583173 ELAC1Q9H777 363 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms