RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 FAM47CQ5HY64 1035 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 SPATA1Q5VX52 437 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 KLHL10Q6JEL2 608 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 TTI2Q6NXR4 508 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 RHPN2Q8IUC4 686 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 ZBTB8OSQ8IWT0 167 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 DHX40Q8IX18 779 aaKnown RBP13.21□□□□□ -0.29
CCDC57-216ENST00000582885 GOLGA5Q8TBA6 731 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 TMEM174Q8WUU8 243 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 ZBTB10Q96DT7 871 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 ACCSQ96QU6 501 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 MED15Q96RN5 788 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 RBSNQ9H1K0 784 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 SEMA6BQ9H3T3 888 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 TYW1Q9NV66 732 aaKnown RBP13.21□□□□□ -0.29
CCDC57-216ENST00000582885 TBX20Q9UMR3 447 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 EXOC7Q9UPT5 735 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 CTNND2Q9UQB3 1225 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 TRAF3IP3Q9Y228 551 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 AKT3Q9Y243 479 aa13.21□□□□□ -0.29
CCDC57-216ENST00000582885 K7ERI5 159 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 ARVCFO00192 962 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 MYCP01106 439 aaPredicted RBP13.2□□□□□ -0.3
CCDC57-216ENST00000582885 SRGAP2CP0DJJ0 459 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 PHKA2P46019 1235 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
CCDC57-216ENST00000582885 GPC3P51654 580 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 ZNF200P98182 395 aaPredicted RBP13.2□□□□□ -0.3
CCDC57-216ENST00000582885 PTK7Q13308 1070 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 NCAPHQ15003 741 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 PCBP1Q15365 356 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC57-216ENST00000582885 UVSSAQ2YD98 709 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 RUFY4Q6ZNE9 571 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 RSPH3Q86UC2 560 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 MAP4K3Q8IVH8 894 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 KSR1Q8IVT5 923 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 AOPEPQ8N6M6 819 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 RNF149Q8NC42 400 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 TSG101Q99816 390 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 MCOLN1Q9GZU1 580 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 CCDC113Q9H0I3 377 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 IFT122Q9HBG6 1241 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 TANC1Q9C0D5 1861 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 CITO14578 2027 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 ZMYM2Q9UBW7 1377 aa13.2□□□□□ -0.3
CCDC57-216ENST00000582885 DNAH12Q6ZR08 3092 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 ANK1P16157 1881 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 BECN2A8MW95 431 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 TGFB1I1O43294 461 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 CALUO43852 315 aaPredicted RBP13.19□□□□□ -0.3
CCDC57-216ENST00000582885 CAND2O75155 1236 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 PIGRP01833 764 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 VTNP04004 478 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 COL6A1P12109 1028 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 NLRP11P59045 1033 aaKnown RBP13.19□□□□□ -0.3
CCDC57-216ENST00000582885 KCNA1Q09470 495 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 STRN3Q13033 797 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 MYBPC2Q14324 1141 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 PTGISQ16647 500 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 FAM187BQ17R55 369 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 C1orf53Q5VUE5 145 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 ANKRD40Q6AI12 368 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 TAS1R3Q7RTX0 852 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 SRGAP1Q7Z6B7 1085 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 LUZP1Q86V48 1076 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 C12orf56Q8IXR9 622 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 ZC3H3Q8IXZ2 948 aaKnown RBP13.19□□□□□ -0.3
CCDC57-216ENST00000582885 NOC3LQ8WTT2 800 aaKnown RBP13.19□□□□□ -0.3
CCDC57-216ENST00000582885 PPP1R13LQ8WUF5 828 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 DNAJB3Q8WWF6 145 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 CTAGE1Q96RT6 745 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 DUSP9Q99956 384 aaKnown RBP13.19□□□□□ -0.3
CCDC57-216ENST00000582885 KIFC3Q9BVG8 833 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 TMEM106CQ9BVX2 250 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 FAM49AQ9H0Q0 323 aaPredicted RBP13.19□□□□□ -0.3
CCDC57-216ENST00000582885 GBP3Q9H0R5 595 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 ADAMTS10Q9H324 1103 aa13.19□□□□□ -0.3
CCDC57-216ENST00000582885 MROH7Q68CQ1 1323 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 TRIP11Q15643 1979 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 A0A087WZ62 844 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 GOLGA6L3A6NEY3 463 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 GOLGA6L19H0YKK7 550 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 GPR32O75388 356 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 FGFR1OPO95684 399 aaKnown RBP13.18□□□□□ -0.3
CCDC57-216ENST00000582885 RPL13P26373 211 aaKnown RBP13.18□□□□□ -0.3
CCDC57-216ENST00000582885 PMS1P54277 932 aaKnown RBP13.18□□□□□ -0.3
CCDC57-216ENST00000582885 TPM4P67936 248 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 FKBP3Q00688 224 aaKnown RBP13.18□□□□□ -0.3
CCDC57-216ENST00000582885 SNX17Q15036 470 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 MAPK6Q16659 721 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 ZPBP2Q6X784 338 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 HS2ST1Q7LGA3 356 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 SLC9A9Q8IVB4 645 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 NELFCDQ8IXH7 590 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 SYCP3Q8IZU3 236 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 PRIMPOLQ96LW4 560 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 NLRP4Q96MN2 994 aa13.18□□□□□ -0.3
CCDC57-216ENST00000582885 FDXACB1Q9BRP7 624 aaPredicted RBP13.18□□□□□ -0.3
CCDC57-216ENST00000582885 GCOM2Q9BZD3 368 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms