RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 SLC26A6Q9BXS9 759 aa11.65□□□□□ -0.54
SS18-221ENST00000582448 WNT8AQ9H1J5 351 aa11.65□□□□□ -0.54
SS18-221ENST00000582448 RASSF4Q9H2L5 321 aa11.65□□□□□ -0.54
SS18-221ENST00000582448 A1CFQ9NQ94 594 aaKnown RBP11.65□□□□□ -0.54
SS18-221ENST00000582448 TCP11L1Q9NUJ3 509 aa11.65□□□□□ -0.54
SS18-221ENST00000582448 MTMR4Q9NYA4 1195 aa11.65□□□□□ -0.54
SS18-221ENST00000582448 GNEQ9Y223 722 aaKnown RBP11.65□□□□□ -0.54
SS18-221ENST00000582448 TTC28Q96AY4 2481 aa11.65□□□□□ -0.54
SS18-221ENST00000582448 PARP14Q460N5 1801 aa11.65□□□□□ -0.55
SS18-221ENST00000582448 TCF20Q9UGU0 1960 aaKnown RBP11.65□□□□□ -0.55
SS18-221ENST00000582448 IGKV6D-41A0A0C4DH26 115 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 DEXIO95424 95 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 TTLL1O95922 423 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 PCSK2P16519 638 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 GNAQP50148 359 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 STAT2P52630 851 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 OAZ1P54368 228 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 TTLL4Q14679 1199 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 AAK1Q2M2I8 961 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 KRT40Q6A162 431 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 IQSEC1Q6DN90 963 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 BRAPQ7Z569 592 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 CEP120Q8N960 986 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 FAM133AQ8N9E0 248 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 PPP1R13LQ8WUF5 828 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 CHURC1Q8WUH1 139 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 MKL1Q969V6 931 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 C1QTNF1Q9BXJ1 281 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 CHRDQ9H2X0 955 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 LMBRD1Q9NUN5 540 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 STX8Q9UNK0 236 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 PCDHA11Q9Y5I1 949 aa11.64□□□□□ -0.55
SS18-221ENST00000582448 MUC3AQ02505 3323 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 FIBPO43427 364 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 CA3P07451 260 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 MYL3P08590 195 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 ACPPP15309 386 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 CDC27P30260 824 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 SLC1A4P43007 532 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 CHMP4BP1P59074 171 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 ECM1Q16610 540 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 MUM1L1Q5H9M0 696 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 FAM47CQ5HY64 1035 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 CEP135Q66GS9 1140 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 NSMFQ6X4W1 530 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 KCTD1Q719H9 257 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 FAM160B2Q86V87 743 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 TMEM87AQ8NBN3 555 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 FBXO18Q8NFZ0 1043 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 ARNTL2Q8WYA1 636 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 ANKS1AQ92625 1134 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 SPACA7Q96KW9 195 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 MAP3K14Q99558 947 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 LZTS2Q9BRK4 669 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 RNF26Q9BY78 433 aaPredicted RBP11.63□□□□□ -0.55
SS18-221ENST00000582448 FTOQ9C0B1 505 aaKnown RBP eCLIP11.63□□□□□ -0.55
SS18-221ENST00000582448 EPHX3Q9H6B9 360 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 TPSG1Q9NRR2 321 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 TRMT13Q9NUP7 481 aaKnown RBP11.63□□□□□ -0.55
SS18-221ENST00000582448 SALL4Q9UJQ4 1053 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 MTCH2Q9Y6C9 303 aa11.63□□□□□ -0.55
SS18-221ENST00000582448 ICMTO60725 284 aa11.62□□□□□ -0.55
SS18-221ENST00000582448 DTNBO60941 627 aa11.62□□□□□ -0.55
SS18-221ENST00000582448 FDPSP14324 419 aaKnown RBP11.62□□□□□ -0.55
SS18-221ENST00000582448 NKX3-2P78367 333 aa11.62□□□□□ -0.55
SS18-221ENST00000582448 RESTQ13127 1097 aa11.62□□□□□ -0.55
SS18-221ENST00000582448 TAPT1Q6NXT6 567 aa11.62□□□□□ -0.55
SS18-221ENST00000582448 GMCL1P1Q8NEA9 526 aa11.62□□□□□ -0.55
SS18-221ENST00000582448 PHKBQ93100 1093 aa11.62□□□□□ -0.55
SS18-221ENST00000582448 SPATA32Q96LK8 384 aa11.62□□□□□ -0.55
SS18-221ENST00000582448 LACRTQ9GZZ8 138 aa11.62□□□□□ -0.55
SS18-221ENST00000582448 GZF1Q9H116 711 aaPredicted RBP11.62□□□□□ -0.55
SS18-221ENST00000582448 BRMS1Q9HCU9 246 aa11.62□□□□□ -0.55
SS18-221ENST00000582448 MCM3APO60318 1980 aa11.61□□□□□ -0.55
SS18-221ENST00000582448 EPOPA6NHQ4 379 aa11.61□□□□□ -0.55
SS18-221ENST00000582448 SUPT20HL2P0C7V6 817 aa11.61□□□□□ -0.55
SS18-221ENST00000582448 TOP1P11387 765 aaKnown RBP11.61□□□□□ -0.55
SS18-221ENST00000582448 ACTN1P12814 892 aa11.61□□□□□ -0.55
SS18-221ENST00000582448 UBE2HP62256 183 aa11.61□□□□□ -0.55
SS18-221ENST00000582448 GUCY1B3Q02153 619 aa11.61□□□□□ -0.55
SS18-221ENST00000582448 TROAPQ12815 778 aa11.61□□□□□ -0.55
SS18-221ENST00000582448 NTRK3Q16288 839 aa11.61□□□□□ -0.55
SS18-221ENST00000582448 TKFCQ3LXA3 575 aa11.61□□□□□ -0.55
SS18-221ENST00000582448 LRFN3Q9BTN0 628 aa11.61□□□□□ -0.55
SS18-221ENST00000582448 SEZ6LQ9BYH1 1024 aa11.61□□□□□ -0.55
SS18-221ENST00000582448 WDR11Q9BZH6 1224 aa11.61□□□□□ -0.55
SS18-221ENST00000582448 EGFL7Q9UHF1 273 aa11.61□□□□□ -0.55
SS18-221ENST00000582448 CCPG1Q9ULG6 757 aa11.61□□□□□ -0.55
SS18-221ENST00000582448 ZNF536O15090 1300 aa11.6□□□□□ -0.55
SS18-221ENST00000582448 KIF28PB7ZC32 967 aa11.6□□□□□ -0.55
SS18-221ENST00000582448 PRPF3O43395 683 aaKnown RBP11.6□□□□□ -0.55
SS18-221ENST00000582448 NMT2O60551 498 aa11.6□□□□□ -0.55
SS18-221ENST00000582448 SETDB1Q15047 1291 aa11.6□□□□□ -0.55
SS18-221ENST00000582448 TMTC3Q6ZXV5 915 aa11.6□□□□□ -0.55
SS18-221ENST00000582448 OR6J1Q8NGC5 347 aa11.6□□□□□ -0.55
SS18-221ENST00000582448 VWCEQ96DN2 955 aa11.6□□□□□ -0.55
SS18-221ENST00000582448 CYP39A1Q9NYL5 469 aa11.6□□□□□ -0.55
SS18-221ENST00000582448 Q9Y3F1 56 aa11.6□□□□□ -0.55
SS18-221ENST00000582448 FAM86C2PA6NEL3 165 aa11.59□□□□□ -0.55
SS18-221ENST00000582448 PFKMP08237 780 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms