RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SLC18A3Q16572 532 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 DPY19L2P1Q6NXN4 242 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 XXYLT1Q8NBI6 393 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 IGSF9BQ9UPX0 1349 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 RFX1P22670 979 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 RTP1P59025 263 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 AMPD2Q01433 879 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 GFPT1Q06210 699 aaPredicted RBP24.69■■□□□ 1.54
CCDC47-204ENST00000582252 NOGQ13253 232 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 XKR3Q5GH77 459 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 TEX35Q5T0J7 233 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 WDR78Q5VTH9 848 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 PAPD7Q5XG87 772 aaKnown RBP24.69■■□□□ 1.54
CCDC47-204ENST00000582252 VPS36Q86VN1 386 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 RNF10Q8N5U6 811 aaKnown RBP24.69■■□□□ 1.54
CCDC47-204ENST00000582252 MMP19Q99542 508 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 PORCNQ9H237 461 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 IKZF4Q9H2S9 585 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 KMT5AQ9NQR1 393 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 SEPT9Q9UHD8 586 aaPredicted RBP24.69■■□□□ 1.54
CCDC47-204ENST00000582252 FHOD1Q9Y613 1164 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 SAR1BQ9Y6B6 198 aa24.69■■□□□ 1.54
CCDC47-204ENST00000582252 ADGRA2Q96PE1 1338 aa24.68■■□□□ 1.54
CCDC47-204ENST00000582252 MACROD2A1Z1Q3 448 aa24.68■■□□□ 1.54
CCDC47-204ENST00000582252 TMEM150BA6NC51 233 aa24.68■■□□□ 1.54
CCDC47-204ENST00000582252 CCDC169A6NNP5 214 aa24.68■■□□□ 1.54
CCDC47-204ENST00000582252 SLC16A4O15374 487 aa24.68■■□□□ 1.54
CCDC47-204ENST00000582252 PRKCIP41743 596 aa24.68■■□□□ 1.54
CCDC47-204ENST00000582252 TM4SF4P48230 202 aa24.68■■□□□ 1.54
CCDC47-204ENST00000582252 MYL7Q01449 175 aa24.68■■□□□ 1.54
CCDC47-204ENST00000582252 PRKCEQ02156 737 aa24.68■■□□□ 1.54
CCDC47-204ENST00000582252 CYP4F22Q6NT55 531 aa24.68■■□□□ 1.54
CCDC47-204ENST00000582252 TRAPPC11Q7Z392 1133 aa24.68■■□□□ 1.54
CCDC47-204ENST00000582252 ATP6V0A4Q9HBG4 840 aa24.68■■□□□ 1.54
CCDC47-204ENST00000582252 SIX2Q9NPC8 291 aa24.68■■□□□ 1.54
CCDC47-204ENST00000582252 GPRC5CQ9NQ84 441 aa24.68■■□□□ 1.54
CCDC47-204ENST00000582252 TFR2Q9UP52 801 aa24.68■■□□□ 1.54
CCDC47-204ENST00000582252 CTAGE15A4D2H0 777 aa24.67■■□□□ 1.54
CCDC47-204ENST00000582252 P4HA2O15460 535 aa24.67■■□□□ 1.54
CCDC47-204ENST00000582252 ZNF862O60290 1169 aa24.67■■□□□ 1.54
CCDC47-204ENST00000582252 CTAGE8P0CG41 777 aa24.67■■□□□ 1.54
CCDC47-204ENST00000582252 FERP16591 822 aa24.67■■□□□ 1.54
CCDC47-204ENST00000582252 APBA1Q02410 837 aa24.67■■□□□ 1.54
CCDC47-204ENST00000582252 CTAGE6Q86UF2 777 aa24.67■■□□□ 1.54
CCDC47-204ENST00000582252 CTAGE4Q8IX94 777 aa24.67■■□□□ 1.54
CCDC47-204ENST00000582252 VTI1AQ96AJ9 217 aa24.67■■□□□ 1.54
CCDC47-204ENST00000582252 SH2D3AQ9BRG2 576 aa24.67■■□□□ 1.54
CCDC47-204ENST00000582252 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.67■■□□□ 1.54
CCDC47-204ENST00000582252 EFCC1Q9HA90 598 aa24.67■■□□□ 1.54
CCDC47-204ENST00000582252 CCDC172P0C7W6 258 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 H2AFXP16104 143 aaPredicted RBP24.66■■□□□ 1.54
CCDC47-204ENST00000582252 SCP2P22307 547 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 STAT1P42224 750 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 JAM2P57087 298 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 CNTN2Q02246 1040 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 ARID5AQ03989 594 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 CKAP4Q07065 602 aaKnown RBP24.66■■□□□ 1.54
CCDC47-204ENST00000582252 GRM1Q13255 1194 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 DEFB115Q30KQ5 88 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 FBXO38Q6PIJ6 1188 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 TRMT1LQ7Z2T5 733 aaKnown RBP24.66■■□□□ 1.54
CCDC47-204ENST00000582252 MAP4K3Q8IVH8 894 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 CCDC60Q8IWA6 550 aaPredicted RBP24.66■■□□□ 1.54
CCDC47-204ENST00000582252 IFT74Q96LB3 600 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 NTPCRQ9BSD7 190 aaKnown RBP24.66■■□□□ 1.54
CCDC47-204ENST00000582252 CYP26B1Q9NR63 512 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 HSPBP1Q9NZL4 362 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 TBX20Q9UMR3 447 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 JRKLQ9Y4A0 524 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 MCM3APO60318 1980 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 ATP8B3O60423 1300 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 STBD1O95210 358 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 ATG7O95352 703 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 EDNRBP24530 442 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 NPTX2P47972 431 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 SP4Q02446 784 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 TMEM161BQ8NDZ6 487 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 CCDC94Q9BW85 323 aaPredicted RBP24.66■■□□□ 1.54
CCDC47-204ENST00000582252 R3HDMLQ9H3Y0 253 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 ZNF302Q9NR11 478 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 DOCK3Q8IZD9 2030 aa24.66■■□□□ 1.54
CCDC47-204ENST00000582252 VAMP7P51809 220 aa24.65■■□□□ 1.54
CCDC47-204ENST00000582252 NEDD9Q14511 834 aa24.65■■□□□ 1.54
CCDC47-204ENST00000582252 IRF2BP2Q7Z5L9 587 aa24.65■■□□□ 1.54
CCDC47-204ENST00000582252 REM2Q8IYK8 340 aaPredicted RBP24.65■■□□□ 1.54
CCDC47-204ENST00000582252 ABRAQ8N0Z2 381 aa24.65■■□□□ 1.54
CCDC47-204ENST00000582252 RPGRIP1Q96KN7 1286 aa24.65■■□□□ 1.54
CCDC47-204ENST00000582252 CAPNS2Q96L46 248 aa24.65■■□□□ 1.54
CCDC47-204ENST00000582252 NOX5Q96PH1 765 aa24.65■■□□□ 1.54
CCDC47-204ENST00000582252 ZFYVE28Q9HCC9 887 aa24.65■■□□□ 1.54
CCDC47-204ENST00000582252 PUF60Q9UHX1 559 aaKnown RBP24.65■■□□□ 1.54
CCDC47-204ENST00000582252 LRRC37A2A6NM11 1700 aa24.65■■□□□ 1.54
CCDC47-204ENST00000582252 DNAJC25-GNG10A0A024R161 153 aa24.64■■□□□ 1.54
CCDC47-204ENST00000582252 STRNO43815 780 aa24.64■■□□□ 1.54
CCDC47-204ENST00000582252 GFPT2O94808 682 aa24.64■■□□□ 1.54
CCDC47-204ENST00000582252 ATP1A1P05023 1023 aaKnown RBP24.64■■□□□ 1.54
CCDC47-204ENST00000582252 TGFB3P10600 412 aa24.64■■□□□ 1.54
CCDC47-204ENST00000582252 SEPT14Q6ZU15 432 aa24.64■■□□□ 1.54
CCDC47-204ENST00000582252 CYFIP1Q7L576 1253 aa24.64■■□□□ 1.54
CCDC47-204ENST00000582252 STK33Q9BYT3 514 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms