RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 FOXD4L4Q8WXT5 416 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-212ENST00000582122 LARP4BQ92615 738 aaKnown RBP11.53□□□□□ -0.56
TOP3A-212ENST00000582122 RAD54LQ92698 747 aa11.53□□□□□ -0.56
TOP3A-212ENST00000582122 PNMA5Q96PV4 448 aa11.53□□□□□ -0.56
TOP3A-212ENST00000582122 PPP1R16BQ96T49 567 aa11.53□□□□□ -0.56
TOP3A-212ENST00000582122 TMEM161AQ9NX61 479 aa11.53□□□□□ -0.56
TOP3A-212ENST00000582122 LARSQ9P2J5 1176 aaKnown RBP11.53□□□□□ -0.56
TOP3A-212ENST00000582122 TTC3P53804 2025 aa11.53□□□□□ -0.56
TOP3A-212ENST00000582122 ARID2Q68CP9 1835 aa11.53□□□□□ -0.56
TOP3A-212ENST00000582122 A0A0U1RQF3 1178 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-212ENST00000582122 INO80B-WBP1J3KQ70 363 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 TNFRSF10AO00220 468 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 PLCG1P19174 1290 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 STAT6P42226 847 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 FAM189BP81408 668 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 DEFB103AP81534 67 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 HTRA4P83105 476 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-212ENST00000582122 AMPD3Q01432 767 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 PKP1Q13835 747 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 CAPSQ13938 189 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 DSC3Q14574 896 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 KARSQ15046 597 aaKnown RBP11.52□□□□□ -0.57
TOP3A-212ENST00000582122 MAPK6Q16659 721 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 FAM187BQ17R55 369 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 CSPP1Q1MSJ5 1256 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 CDCA2Q69YH5 1023 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-212ENST00000582122 TWF2Q6IBS0 349 aaKnown RBP11.52□□□□□ -0.57
TOP3A-212ENST00000582122 NOTUMQ6P988 496 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.52□□□□□ -0.57
TOP3A-212ENST00000582122 SV2BQ7L1I2 683 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 KSR1Q8IVT5 923 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 IQUBQ8NA54 791 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 PGBD4Q96DM1 585 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 EPSTI1Q96J88 318 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 SPATA32Q96LK8 384 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 NTPCRQ9BSD7 190 aaKnown RBP11.52□□□□□ -0.57
TOP3A-212ENST00000582122 TMX1Q9H3N1 280 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 MAGEF1Q9HAY2 307 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 AGPAT5Q9NUQ2 364 aa11.52□□□□□ -0.57
TOP3A-212ENST00000582122 PRMT7Q9NVM4 692 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-212ENST00000582122 PIN4Q9Y237 131 aaKnown RBP11.52□□□□□ -0.57
TOP3A-212ENST00000582122 A0A087WWV3 80 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 C9IYK1 514 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 ZNF623O75123 536 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 KRT18P05783 430 aaKnown RBP11.51□□□□□ -0.57
TOP3A-212ENST00000582122 NCLP19338 710 aaKnown RBP11.51□□□□□ -0.57
TOP3A-212ENST00000582122 GRIN1Q05586 938 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 PPP2R2DQ66LE6 453 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 MAEAQ7L5Y9 396 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 GPBP1Q86WP2 473 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 CMTR2Q8IYT2 770 aaKnown RBP11.51□□□□□ -0.57
TOP3A-212ENST00000582122 ABI1Q8IZP0 508 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 SP7Q8TDD2 431 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-212ENST00000582122 ASAP3Q8TDY4 903 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 SPIRE2Q8WWL2 714 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 KCNN1Q92952 543 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 CCDC34Q96HJ3 373 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 CLIC6Q96NY7 704 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 OSBPL7Q9BZF2 842 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 ZNF576Q9H609 170 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 TMEM134Q9H6X4 195 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 UBN1Q9NPG3 1134 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 USP25Q9UHP3 1055 aa11.51□□□□□ -0.57
TOP3A-212ENST00000582122 MYH15Q9Y2K3 1946 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 COL4A6Q14031 1691 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 MYO9BQ13459 2157 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 GRXCR1A8MXD5 290 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 K7ERI5 159 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 HIP1RO75146 1068 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 TBCAO75347 108 aaKnown RBP11.5□□□□□ -0.57
TOP3A-212ENST00000582122 DGKIO75912 1065 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 UPP2O95045 317 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 PLS3P13797 630 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 COL9A1P20849 921 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 MBTD1Q05BQ5 628 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 TCTN1Q2MV58 587 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 ADALQ6DHV7 355 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 KCNK18Q7Z418 384 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 RTN4RL1Q86UN2 441 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-212ENST00000582122 ECHDC2Q86YB7 292 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 LEO1Q8WVC0 666 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-212ENST00000582122 TGS1Q96RS0 853 aaKnown RBP11.5□□□□□ -0.57
TOP3A-212ENST00000582122 GAS2L1Q99501 681 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-212ENST00000582122 PLIN2Q99541 437 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 ADPGKQ9BRR6 497 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 RUSC1Q9BVN2 902 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 MRPL9Q9BYD2 267 aaKnown RBP11.5□□□□□ -0.57
TOP3A-212ENST00000582122 TNMDQ9H2S6 317 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 NKX2-4Q9H2Z4 354 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 FZD8Q9H461 694 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 PARVGQ9HBI0 331 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 GPRC5CQ9NQ84 441 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 KMT5AQ9NQR1 393 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 AAASQ9NRG9 546 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 BLOC1S4Q9NUP1 217 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 SEL1LQ9UBV2 794 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 PCDHA7Q9UN72 937 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 ZDHHC9Q9Y397 364 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms