RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 CATSPER4Q7RTX7 472 aa13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 MRPL10Q7Z7H8 261 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 KLHL23Q8NBE8 558 aa13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 SNX21Q969T3 373 aa13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 C11orf84Q9BUA3 381 aaPredicted RBP13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 COL25A1Q9BXS0 654 aaPredicted RBP13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 ALG13Q9NP73 1137 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 FAM105AQ9NUU6 356 aa13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 THEGQ9P2T0 379 aa13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 KIAA1024Q9UPX6 916 aa13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 PIN4Q9Y237 131 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-209ENST00000581832 K7ELQ4 463 aaPredicted RBP13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 SYT1P21579 422 aa13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 TFF2Q03403 129 aa13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 PCBP1Q15365 356 aaKnown RBP eCLIP13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 PTPROQ16827 1216 aa13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 HYIQ5T013 277 aa13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 ARL6IP4Q66PJ3 421 aaKnown RBP13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 PADI6Q6TGC4 694 aa13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 DTHD1Q6ZMT9 781 aa13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 KCNK18Q7Z418 384 aa13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 BSNDQ8WZ55 320 aa13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 ASB2Q96Q27 587 aa13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 LMAN2LQ9H0V9 348 aa13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 POLR3FQ9H1D9 316 aaPredicted RBP13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 DDX19AQ9NUU7 478 aaKnown RBP13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 STK24Q9Y6E0 443 aa13.76□□□□□ -0.21
SMARCD2-209ENST00000581832 HOXA2O43364 376 aa13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 TSPAN1O60635 241 aa13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 MRPS5P82675 430 aaKnown RBP13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 TCEAL5Q5H9L2 206 aa13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 CDCA2Q69YH5 1023 aaPredicted RBP13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 TWF2Q6IBS0 349 aaKnown RBP13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 MAEAQ7L5Y9 396 aa13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 BRAPQ7Z569 592 aa13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 COLGALT1Q8NBJ5 622 aa13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 SMG8Q8ND04 991 aaKnown RBP13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 MCPH1Q8NEM0 835 aa13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 HELQQ8TDG4 1101 aa13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 SNX29Q8TEQ0 813 aa13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 LPPQ93052 612 aa13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 PNMA5Q96PV4 448 aa13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 RAB34Q9BZG1 259 aa13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 BHMT2Q9H2M3 363 aa13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 COG5Q9UP83 839 aa13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 PCDHB2Q9Y5E7 798 aa13.75□□□□□ -0.21
SMARCD2-209ENST00000581832 MYH11P35749 1972 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 E9PMD0 336 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 OFD1O75665 1012 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 EYA4O95677 639 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 SKIP12755 728 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 BMP1P13497 986 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 ARF4P18085 180 aaPredicted RBP13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 PDCP20941 246 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 AXLP30530 894 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 IRS1P35568 1242 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 RAB27AP51159 221 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 GRIN1Q05586 938 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 RESTQ13127 1097 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 TFDP1Q14186 410 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 TJAP1Q5JTD0 557 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 AGMOQ6ZNB7 445 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 DAW1Q8N136 415 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 POF1BQ8WVV4 589 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 HLA-CQ95604 372 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 FZD8Q9H461 694 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 POLD4Q9HCU8 107 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 MTMR6Q9Y217 621 aa13.74□□□□□ -0.21
SMARCD2-209ENST00000581832 TRIP11Q15643 1979 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 A0A1B0GUA9 196 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 ARHGEF35A5YM69 484 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 VWA3AA6NCI4 1184 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 TTLL13PA6NNM8 815 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 INO80B-WBP1J3KQ70 363 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 DLL1O00548 723 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 B4GALT5O43286 388 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 EDN1P05305 212 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 NCLP19338 710 aaKnown RBP13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 AFF1P51825 1210 aaKnown RBP13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 PLCB3Q01970 1234 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 PTPAQ15257 358 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 SF3A1Q15459 793 aaKnown RBP13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 SKIV2LQ15477 1246 aaKnown RBP13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 FAM187BQ17R55 369 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 LONRF3Q496Y0 759 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 TIGD5Q53EQ6 642 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 KRT79Q5XKE5 535 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 PPP4R3CPQ6ZMV5 832 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 C1orf186Q6ZWK4 172 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 LRRC43Q8N309 656 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 RNF169Q8NCN4 708 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 LRRC15Q8TF66 581 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 CPB2Q96IY4 423 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 CCDC43Q96MW1 224 aaKnown RBP13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 EIF2AQ9BY44 585 aaKnown RBP13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 CCDC113Q9H0I3 377 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 NSUN3Q9H649 340 aaKnown RBP13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 PCDHB12Q9Y5F1 795 aa13.73□□□□□ -0.21
SMARCD2-209ENST00000581832 VPS37CA5D8V6 355 aaPredicted RBP13.72□□□□□ -0.21
SMARCD2-209ENST00000581832 FSCN2O14926 492 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms