RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 ZNF713Q8N859 430 aaPredicted RBP5.87□□□□□ -1.47
CDH8-206ENST00000580044 MIGA1Q8NAN2 632 aa5.87□□□□□ -1.47
CDH8-206ENST00000580044 FAM76AQ8TAV0 307 aa5.87□□□□□ -1.47
CDH8-206ENST00000580044 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.87□□□□□ -1.47
CDH8-206ENST00000580044 ANKS1AQ92625 1134 aa5.87□□□□□ -1.47
CDH8-206ENST00000580044 SECISBP2LQ93073 1101 aaKnown RBP5.87□□□□□ -1.47
CDH8-206ENST00000580044 RUFY1Q96T51 708 aa5.87□□□□□ -1.47
CDH8-206ENST00000580044 RIOK1Q9BRS2 568 aaKnown RBP5.87□□□□□ -1.47
CDH8-206ENST00000580044 EHD4Q9H223 541 aa5.87□□□□□ -1.47
CDH8-206ENST00000580044 KAT14Q9H8E8 782 aa5.87□□□□□ -1.47
CDH8-206ENST00000580044 ZNF287Q9HBT7 754 aa5.87□□□□□ -1.47
CDH8-206ENST00000580044 INCENPQ9NQS7 918 aa5.87□□□□□ -1.47
CDH8-206ENST00000580044 TCP11L1Q9NUJ3 509 aa5.87□□□□□ -1.47
CDH8-206ENST00000580044 PCDHA4Q9UN74 947 aa5.87□□□□□ -1.47
CDH8-206ENST00000580044 ZBTB1Q9Y2K1 713 aa5.87□□□□□ -1.47
CDH8-206ENST00000580044 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.87□□□□□ -1.47
CDH8-206ENST00000580044 TACC3Q9Y6A5 838 aa5.87□□□□□ -1.47
CDH8-206ENST00000580044 ROBO3Q96MS0 1386 aa5.87□□□□□ -1.47
CDH8-206ENST00000580044 COL1A1P02452 1464 aaPredicted RBP5.87□□□□□ -1.47
CDH8-206ENST00000580044 FOCADQ5VW36 1801 aa5.87□□□□□ -1.47
CDH8-206ENST00000580044 CDK5RAP2Q96SN8 1893 aa5.87□□□□□ -1.47
CDH8-206ENST00000580044 SBF2Q86WG5 1849 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 DDX60LQ5H9U9 1706 aaKnown RBP5.86□□□□□ -1.47
CDH8-206ENST00000580044 NHSQ6T4R5 1651 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 SHTN1A0MZ66 631 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 GOLGA6BA6NDN3 693 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 LRRIQ3A6PVS8 624 aaPredicted RBP5.86□□□□□ -1.47
CDH8-206ENST00000580044 PES1O00541 588 aaKnown RBP5.86□□□□□ -1.47
CDH8-206ENST00000580044 NDUFB5O43674 189 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 PRPF6O94906 941 aaKnown RBP5.86□□□□□ -1.47
CDH8-206ENST00000580044 LCA5LO95447 670 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 DLGAP3O95886 979 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 CPP00450 1065 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 EPB41P11171 864 aaKnown RBP5.86□□□□□ -1.47
CDH8-206ENST00000580044 ADMP35318 185 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 HERVK_113P62684 666 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 CHRNDQ07001 517 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 EARS2Q5JPH6 523 aaKnown RBP5.86□□□□□ -1.47
CDH8-206ENST00000580044 PEAR1Q5VY43 1037 aaPredicted RBP5.86□□□□□ -1.47
CDH8-206ENST00000580044 SPTY2D1Q68D10 685 aaPredicted RBP5.86□□□□□ -1.47
CDH8-206ENST00000580044 NCAPH2Q6IBW4 605 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 TTI2Q6NXR4 508 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 OGFOD3Q6PK18 319 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 CCNI2Q6ZMN8 369 aaPredicted RBP5.86□□□□□ -1.47
CDH8-206ENST00000580044 ZNF765Q7L2R6 523 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 ANKRD18AQ8IVF6 992 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 GALNT12Q8IXK2 581 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 C10orf67Q8IYJ2 551 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 RNF10Q8N5U6 811 aaKnown RBP5.86□□□□□ -1.47
CDH8-206ENST00000580044 POU5F2Q8N7G0 328 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 NOA1Q8NC60 698 aaKnown RBP5.86□□□□□ -1.47
CDH8-206ENST00000580044 DDX17Q92841 729 aaKnown RBP5.86□□□□□ -1.47
CDH8-206ENST00000580044 P2RX5Q93086 422 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 CCDC42Q96M95 316 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 C7orf25Q9BPX7 421 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 TUBGCP2Q9BSJ2 902 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 SELENOOQ9BVL4 669 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 TTYH3Q9C0H2 523 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 BLZF1Q9H2G9 400 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 NHEJ1Q9H9Q4 299 aaPredicted RBP5.86□□□□□ -1.47
CDH8-206ENST00000580044 JADE2Q9NQC1 790 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 LATS2Q9NRM7 1088 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 CCDC87Q9NVE4 849 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 KBTBD4Q9NVX7 518 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 SLAIN2Q9P270 581 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 RSPH14Q9UHP6 348 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 SNX12Q9UMY4 172 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 REXO2Q9Y3B8 237 aaKnown RBP5.86□□□□□ -1.47
CDH8-206ENST00000580044 HYOU1Q9Y4L1 999 aa5.86□□□□□ -1.47
CDH8-206ENST00000580044 NRAPQ86VF7 1730 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 ATP8B3O60423 1300 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 A0A087WUV0 522 aaPredicted RBP5.85□□□□□ -1.47
CDH8-206ENST00000580044 PVALEFA0A1B0GWK0 134 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 GRID2IPA4D2P6 1211 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 GOLGA6CA6NDK9 693 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 TSPY2A6NKD2 308 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 SRRM3A6NNA2 597 aaPredicted RBP5.85□□□□□ -1.47
CDH8-206ENST00000580044 METTL12A8MUP2 240 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 B4DLN1 442 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 EBAG9O00559 213 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 SLC26A4O43511 780 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 KLRC4O43908 158 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 HSF2BPO75031 334 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 PRDM1O75626 825 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 NTSR2O95665 410 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 SYF2O95926 243 aaKnown RBP5.85□□□□□ -1.47
CDH8-206ENST00000580044 ATP1A1P05023 1023 aaKnown RBP5.85□□□□□ -1.47
CDH8-206ENST00000580044 OR52Z1P0C646 297 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 GOLGA6DP0CG33 693 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 SMARCA1P28370 1054 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 CASP1P29466 404 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 GNA11P29992 359 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 MTIF2P46199 727 aaKnown RBP5.85□□□□□ -1.47
CDH8-206ENST00000580044 LRRC63Q05C16 580 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 PSMD2Q13200 908 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 GRM4Q14833 912 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 SEPT2Q15019 361 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 CCDC96Q2M329 555 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 CCDC181Q5TID7 509 aa5.85□□□□□ -1.47
CDH8-206ENST00000580044 SUSD4Q5VX71 490 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms