RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 KANK3Q6NY19 840 aa13.77□□□□□ -0.21
CDK5RAP3-216ENST00000579853 TMEM173Q86WV6 379 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-216ENST00000579853 SPDYE1Q8NFV5 336 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-216ENST00000579853 CMASQ8NFW8 434 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-216ENST00000579853 CCDC12Q8WUD4 166 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-216ENST00000579853 TBC1D13Q9NVG8 400 aa13.77□□□□□ -0.21
CDK5RAP3-216ENST00000579853 SSX2IPQ9Y2D8 614 aa13.77□□□□□ -0.21
CDK5RAP3-216ENST00000579853 CEP295Q9C0D2 2601 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 ESYT2A0FGR8 921 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 SLC27A2O14975 620 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 ZBTB43O43298 467 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 SFNP31947 248 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 PRKCEQ02156 737 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 FUT2Q10981 343 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 ZNF410Q86VK4 478 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 REXO1Q8N1G1 1221 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 RMDN1Q96DB5 314 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 PGBD4Q96DM1 585 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 BORCS6Q96GS4 357 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 LRRC2Q9BYS8 371 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 NRDE2Q9H7Z3 1164 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 C6orf50Q9HD87 102 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 DISC1Q9NRI5 854 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 MRPL17Q9NRX2 175 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 KANSL3Q9P2N6 904 aa13.76□□□□□ -0.21
CDK5RAP3-216ENST00000579853 C2orf16Q68DN1 1984 aa13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 CNPP09543 421 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 FGFR4P22455 802 aa13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 GNA11P29992 359 aa13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 CIITAP33076 1130 aa13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 JAK3P52333 1124 aa13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 RCAN1P53805 252 aa13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 PRR16Q569H4 304 aa13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 RNF20Q5VTR2 975 aa13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 PHLDB3Q6NSJ2 640 aa13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 URGCPQ8TCY9 931 aa13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 RUBCNQ92622 972 aa13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 ZNF668Q96K58 619 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 KLHL5Q96PQ7 755 aa13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 HINFPQ9BQA5 517 aa13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 WDR6Q9NNW5 1121 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 FAM105AQ9NUU6 356 aa13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 PIN4Q9Y237 131 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 INPP5FQ9Y2H2 1132 aa13.75□□□□□ -0.21
CDK5RAP3-216ENST00000579853 CCDC196A0A1B0GTZ2 297 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 ZNF862O60290 1169 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 C1RP00736 705 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 ALDH2P05091 517 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 ADH1AP07327 375 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 CFHP08603 1231 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 SRFP11831 508 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 GBP2P32456 591 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 SLC11A1P49279 550 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 PFKFB3Q16875 520 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 CREB3L3Q68CJ9 461 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 KIAA2013Q8IYS2 634 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 RDM1Q8NG50 284 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 EXOC6Q8TAG9 804 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 BICD2Q8TD16 824 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 FAM193BQ96PV7 902 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 RIT2Q99578 217 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 JPH2Q9BR39 696 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 TMEM175Q9BSA9 504 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 LSG1Q9H089 658 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 ZMYND12Q9H0C1 365 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 GBP3Q9H0R5 595 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 EPS15L1Q9UBC2 864 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 FANCMQ8IYD8 2048 aa13.74□□□□□ -0.21
CDK5RAP3-216ENST00000579853 MAP1BP46821 2468 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 DOCK8Q8NF50 2099 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 CLUHO75153 1309 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 CNTNAP2Q9UHC6 1331 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 MED19A0JLT2 244 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 KRBA1A5PL33 1030 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 GOLGA8AA7E2F4 631 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 GOLGA8BA8MQT2 603 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 GAS7O60861 476 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 LILRB3O75022 631 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 OFD1O75665 1012 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 SOD2P04179 222 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 URODP06132 367 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 SDHBP21912 280 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 NECTIN1Q15223 517 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 TARBP2Q15633 366 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 XKR3Q5GH77 459 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 CATSPER4Q7RTX7 472 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 SLC44A3Q8N4M1 653 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 HDAC7Q8WUI4 952 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 BCL7CQ8WUZ0 217 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 LPPQ93052 612 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 NIFKQ9BYG3 293 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 TBC1D17Q9HA65 648 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 DNAJB4Q9UDY4 337 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 FAN1Q9Y2M0 1017 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 SIT1Q9Y3P8 196 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 R4GN57 208 aa13.73□□□□□ -0.21
CDK5RAP3-216ENST00000579853 CFAP47Q6ZTR5 3102 aa13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 A0A087WZ62 844 aa13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 IGKV6-21A0A0C4DH24 114 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms