RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 SFPQP23246 707 aaKnown RBP eCLIP11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 PSMC5P62195 406 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 PPP2R5CQ13362 524 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 NOMO2Q5JPE7 1267 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 CES5AQ6NT32 575 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 MRPL10Q7Z7H8 261 aaKnown RBP11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 RHPN2Q8IUC4 686 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 KSR1Q8IVT5 923 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 VPS52Q8N1B4 723 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 ZNF579Q8NAF0 562 aaKnown RBP11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 KREMEN2Q8NCW0 462 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 RIPOR3Q96MK2 946 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 AIFM3Q96NN9 605 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 VN1R3Q9BXE9 311 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 TM6SF1Q9BZW5 370 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 INO80BQ9C086 356 aaPredicted RBP11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 KCNMB3Q9NPA1 279 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 FAM105AQ9NUU6 356 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 TBC1D13Q9NVG8 400 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 DDX25Q9UHL0 483 aaKnown RBP11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 VAV3Q9UKW4 847 aa11.96□□□□□ -0.49
CSNK1D-210ENST00000579308 CARNS1A5YM72 827 aa11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 B4GALT3O60512 393 aa11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 LILRB3O75022 631 aa11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 PDGFBP01127 241 aaPredicted RBP11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 SP100P23497 879 aaPredicted RBP11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 HOXA11P31270 313 aaPredicted RBP11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 GIT2Q14161 759 aa11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 BMS1Q14692 1282 aaKnown RBP11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 LONRF3Q496Y0 759 aa11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 TWF2Q6IBS0 349 aaKnown RBP11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 KANK3Q6NY19 840 aa11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 GLB1LQ6UWU2 654 aa11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 ZNF280BQ86YH2 543 aa11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 UBALD2Q8IYN6 164 aa11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 C12orf76Q8N812 135 aaPredicted RBP11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 FEZF2Q8TBJ5 459 aa11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 AUTS2Q8WXX7 1259 aa11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 TMEM169Q96HH4 297 aa11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 LARP6Q9BRS8 491 aaKnown RBP11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 DHX33Q9H6R0 707 aaKnown RBP11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 CYP26B1Q9NR63 512 aa11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 WRAP73Q9P2S5 460 aaPredicted RBP11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 PIN4Q9Y237 131 aaKnown RBP11.95□□□□□ -0.5
CSNK1D-210ENST00000579308 ZFHX2Q9C0A1 2572 aaPredicted RBP11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 ZC3H11AO75152 810 aaKnown RBP eCLIP11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 BRD1O95696 1058 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 WEE2P0C1S8 567 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 EPCAMP16422 314 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 MTHFRP42898 656 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 QARSP47897 775 aaKnown RBP11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 SLC11A1P49279 550 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 RAB27AP51159 221 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 AFF1P51825 1210 aaKnown RBP11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 NUBP1P53384 320 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 NPEPPSP55786 919 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 NONOQ15233 471 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■■□□ 19
CSNK1D-210ENST00000579308 INF2Q27J81 1249 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 ATAT1Q5SQI0 421 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 UBXN11Q5T124 520 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 PLA2G4FQ68DD2 849 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 PPP4R3AQ6IN85 833 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 AGMOQ6ZNB7 445 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 CATSPER4Q7RTX7 472 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 ZDHHC14Q8IZN3 488 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 PRPF31Q8WWY3 499 aaKnown RBP11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 HAS1Q92839 578 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 FAM20AQ96MK3 541 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 NLRP4Q96MN2 994 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 JPH2Q9BR39 696 aaPredicted RBP11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 PHF20Q9BVI0 1012 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 MINDY3Q9H8M7 445 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 AGPAT5Q9NUQ2 364 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 DZANK1Q9NVP4 752 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 DNAJB4Q9UDY4 337 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 SORCS3Q9UPU3 1222 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 PPME1Q9Y570 386 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 PCDHB2Q9Y5E7 798 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 CYP46A1Q9Y6A2 500 aa11.94□□□□□ -0.5
CSNK1D-210ENST00000579308 CPLX1O14810 134 aa11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 DDHD2O94830 711 aa11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 P4HBP07237 508 aaKnown RBP11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 PTPN14Q15678 1187 aa11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 LETM2Q2VYF4 491 aa11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 RARS2Q5T160 578 aaKnown RBP11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 KIAA1841Q6NSI8 718 aa11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 KRT25Q7Z3Z0 450 aa11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 SRGAP1Q7Z6B7 1085 aa11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 TMEM143Q96AN5 459 aa11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 PGBD4Q96DM1 585 aa11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 SMOC2Q9H3U7 446 aa11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 KCNJ14Q9UNX9 436 aa11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 USTQ9Y2C2 406 aa11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 INPP5FQ9Y2H2 1132 aa11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 COL4A3BPQ9Y5P4 624 aa11.93□□□□□ -0.5
CSNK1D-210ENST00000579308 MYH9P35579 1960 aaKnown RBP11.92□□□□□ -0.5
CSNK1D-210ENST00000579308 CFAP54Q96N23 3096 aa11.92□□□□□ -0.5
CSNK1D-210ENST00000579308 TBX3O15119 743 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms