RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 C22orf23Q9BZE7 217 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 MFSD1Q9H3U5 465 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 SFXN1Q9H9B4 322 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 CYP26B1Q9NR63 512 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 TBC1D13Q9NVG8 400 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 VPS54Q9P1Q0 977 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 SUCLA2Q9P2R7 463 aaPredicted RBP9.62□□□□□ -0.87
CASC3-206ENST00000579238 STK39Q9UEW8 545 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 PIN4Q9Y237 131 aaKnown RBP9.62□□□□□ -0.87
CASC3-206ENST00000579238 WDR81Q562E7 1941 aa9.62□□□□□ -0.87
CASC3-206ENST00000579238 CYP3A7-CYP3A51PA0A087WV96 503 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 CPA1P15085 419 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 IFNAR1P17181 557 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 CYP3A7P24462 503 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 SLC11A1P49279 550 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 NLRP5P59047 1200 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 FOXK2Q01167 660 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 RNASELQ05823 741 aaKnown RBP9.61□□□□□ -0.87
CASC3-206ENST00000579238 PTPN14Q15678 1187 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 LONRF3Q496Y0 759 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 Q4G0T1 1027 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 BLOC1S2Q6QNY1 142 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 B3GNT9Q6UX72 402 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 TMC5Q6UXY8 1006 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 CCDC149Q6ZUS6 474 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 OTOP3Q7RTS5 596 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 CATSPER4Q7RTX7 472 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 GPR149Q86SP6 731 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 RHPN2Q8IUC4 686 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 URGCPQ8TCY9 931 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 TBCKQ8TEA7 893 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 BCL7CQ8WUZ0 217 aaPredicted RBP9.61□□□□□ -0.87
CASC3-206ENST00000579238 GJA10Q969M2 543 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 PGBD4Q96DM1 585 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 JAKMIP1Q96N16 626 aaKnown RBP9.61□□□□□ -0.87
CASC3-206ENST00000579238 JPH2Q9BR39 696 aaPredicted RBP9.61□□□□□ -0.87
CASC3-206ENST00000579238 SLC26A6Q9BXS9 759 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 EMILIN2Q9BXX0 1053 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 AGXT2Q9BYV1 514 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 SH3GLB2Q9NR46 395 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 INPP5FQ9Y2H2 1132 aa9.61□□□□□ -0.87
CASC3-206ENST00000579238 ZFHX2Q9C0A1 2572 aaPredicted RBP9.6□□□□□ -0.87
CASC3-206ENST00000579238 TMEM150BA6NC51 233 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 SPDYE4A6NLX3 237 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 MEIS3P2A8K0S8 358 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 DDX11L8A8MPP1 907 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 CDC45O75419 566 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 MAFO75444 373 aaPredicted RBP9.6□□□□□ -0.87
CASC3-206ENST00000579238 KLRC2P26717 231 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 CLCN4P51793 760 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 TDGQ13569 410 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 CWF19L1Q69YN2 538 aaKnown RBP9.6□□□□□ -0.87
CASC3-206ENST00000579238 AGMOQ6ZNB7 445 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 FLCNQ8NFG4 579 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 NKD2Q969F2 451 aaPredicted RBP9.6□□□□□ -0.87
CASC3-206ENST00000579238 NLRP4Q96MN2 994 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 KLHL5Q96PQ7 755 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 SH2D3AQ9BRG2 576 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 TMEM175Q9BSA9 504 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 VN1R3Q9BXE9 311 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 GBP3Q9H0R5 595 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 AGPAT5Q9NUQ2 364 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 KANSL3Q9P2N6 904 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 DNAJB4Q9UDY4 337 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 DUSP12Q9UNI6 340 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 PCDHB2Q9Y5E7 798 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 MYO15AQ9UKN7 3530 aa9.6□□□□□ -0.87
CASC3-206ENST00000579238 B4GALT3O60512 393 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 LILRB3O75022 631 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 TDP2O95551 362 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 ALDH2P05091 517 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 CNPP09543 421 aaKnown RBP9.59□□□□□ -0.87
CASC3-206ENST00000579238 AOC1P19801 751 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 RPS6KB1P23443 525 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 EVCP57679 992 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 PSMC5P62195 406 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 LETM2Q2VYF4 491 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 MOXD1Q6UVY6 613 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 C15orf39Q6ZRI6 1047 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 ANO5Q75V66 913 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 FRMD5Q7Z6J6 570 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 MRPL10Q7Z7H8 261 aaKnown RBP9.59□□□□□ -0.87
CASC3-206ENST00000579238 ZNF280BQ86YH2 543 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 KSR1Q8IVT5 923 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 TRIM22Q8IYM9 498 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 CMASQ8NFW8 434 aaPredicted RBP9.59□□□□□ -0.87
CASC3-206ENST00000579238 ETNPPLQ8TBG4 499 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 FEZF2Q8TBJ5 459 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 MBOAT7Q96N66 472 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 FAM193BQ96PV7 902 aaPredicted RBP9.59□□□□□ -0.87
CASC3-206ENST00000579238 RTP3Q9BQQ7 232 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 RSAD1Q9HA92 442 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 IFT122Q9HBG6 1241 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 MRPL17Q9NRX2 175 aaKnown RBP9.59□□□□□ -0.87
CASC3-206ENST00000579238 IGSF9Q9P2J2 1179 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 PCDHA4Q9UN74 947 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 FAN1Q9Y2M0 1017 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 SNX14Q9Y5W7 946 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 FAM186AA6NE01 2351 aa9.59□□□□□ -0.87
CASC3-206ENST00000579238 CNTNAP2Q9UHC6 1331 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms