RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 PSPC1Q8WXF1 523 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 HAS1Q92839 578 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 GTF3C6Q969F1 213 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 RPGRIP1Q96KN7 1286 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 CCDC43Q96MW1 224 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 GBP3Q9H0R5 595 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 FAM105AQ9NUU6 356 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 LZTS1Q9Y250 596 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 USP15Q9Y4E8 981 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 BRWD1Q9NSI6 2320 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 JAK2O60674 1132 aa10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 SKIP12755 728 aa10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 FDPSP14324 419 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 SP100P23497 879 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 RFC5P40937 340 aa10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 BCAR1P56945 870 aa10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 SMC1AQ14683 1233 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 EMC2Q15006 297 aa10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 CALCRLQ16602 461 aa10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 GLB1LQ6UWU2 654 aa10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 C4orf19Q8IY42 314 aa10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 EXOC8Q8IYI6 725 aa10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 SLC39A11Q8N1S5 342 aa10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 NSUN7Q8NE18 718 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 PRPF31Q8WWY3 499 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 TMEM169Q96HH4 297 aa10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 MTRQ99707 1265 aa10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ZSWIM4Q9H7M6 989 aa10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 NGRNQ9NPE2 291 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 MEIS3P2A8K0S8 358 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 BTBD18B2RXH4 712 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ZBTB39O15060 712 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 NEMFO60524 1076 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ERLIN2O94905 339 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ATP2B1P20020 1258 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 TXKP42681 527 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 RAB27AP51159 221 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 GUCY1B3Q02153 619 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 LAMTOR4Q0VGL1 99 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 BMS1Q14692 1282 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 NOMO2Q5JPE7 1267 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ANKRD54Q6NXT1 300 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 DIS3L2Q8IYB7 885 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 RNF149Q8NC42 400 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 URGCPQ8TCY9 931 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 TCP11Q8WWU5 503 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 PGBD4Q96DM1 585 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 EIF2AK1Q9BQI3 630 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 DHX33Q9H6R0 707 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 IFT122Q9HBG6 1241 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 AGPAT5Q9NUQ2 364 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 TBC1D13Q9NVG8 400 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 PCDHA12Q9UN75 941 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 PPME1Q9Y570 386 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 WDR81Q562E7 1941 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 C5orf42Q9H799 3197 aa10.28□□□□□ -0.76
CDK5RAP3-211ENST00000578996 MYO7AQ13402 2215 aa10.27□□□□□ -0.76
CDK5RAP3-211ENST00000578996 GAS2O43903 313 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 EIF5BO60841 1220 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 CXCL14O95715 111 aa10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 SPIRE1Q08AE8 756 aa10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 SRGAP1Q7Z6B7 1085 aa10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 FERMT3Q86UX7 667 aa10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 TMEM173Q86WV6 379 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 VPS52Q8N1B4 723 aa10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 AUTS2Q8WXX7 1259 aa10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 CASP10Q92851 521 aa10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 TNFRSF25Q93038 417 aa10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 FAM193BQ96PV7 902 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 PHF7Q9BWX1 381 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 NRDE2Q9H7Z3 1164 aa10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 TTC12Q9H892 705 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 MINDY3Q9H8M7 445 aa10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 RSAD1Q9HA92 442 aa10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 TSHZ2Q9NRE2 1034 aa10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 DNAJB4Q9UDY4 337 aa10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 PCDHB2Q9Y5E7 798 aa10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 HCFC2Q9Y5Z7 792 aa10.27□□□□□ -0.77
CDK5RAP3-211ENST00000578996 C2orf71A6NGG8 1288 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 SPDYE4A6NLX3 237 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 INO80B-WBP1J3KQ70 363 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 WNT7AO00755 349 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ASAP2O43150 1006 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 OFD1O75665 1012 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 SLITRK3O94933 977 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 SEC24BO95487 1268 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 POMCP01189 267 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 SSBP05455 408 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 MCM7P33993 719 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 NCBP1Q09161 790 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 CBX2Q14781 532 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 SAFBQ15424 915 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 HERC4Q5GLZ8 1057 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ERICH6BQ5W0A0 696 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 HFE2Q6ZVN8 426 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 MAEAQ7L5Y9 396 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ZBTB33Q86T24 672 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 CCDC83Q8IWF9 413 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 MRPL43Q8N983 215 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms