RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 MUC3AQ02505 3323 aa16.23■□□□□ 0.19
CCDC57-212ENST00000578910 ATG2AQ2TAZ0 1938 aa16.23■□□□□ 0.19
CCDC57-212ENST00000578910 NT5C1B-RDH14C9J2C7 533 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 PER2O15055 1255 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 MED24O75448 989 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 SKIP12755 728 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 RARRES1P49788 294 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 GNL2Q13823 731 aaKnown RBP16.22■□□□□ 0.19
CCDC57-212ENST00000578910 CLUL1Q15846 466 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 NOSTRINQ8IVI9 506 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 LRRC43Q8N309 656 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 C4orf32Q8N8J7 132 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 MRPS27Q92552 414 aaKnown RBP16.22■□□□□ 0.19
CCDC57-212ENST00000578910 KHSRPQ92945 711 aaKnown RBP eCLIP16.22■□□□□ 0.19
CCDC57-212ENST00000578910 PPP2R3CQ969Q6 453 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 ZNF558Q96NG5 402 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 EPHX3Q9H6B9 360 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 TLE6Q9H808 572 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 TLR9Q9NR96 1032 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 AGPAT5Q9NUQ2 364 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 SPG21Q9NZD8 308 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 PUF60Q9UHX1 559 aaKnown RBP16.22■□□□□ 0.19
CCDC57-212ENST00000578910 PLXNA4Q9HCM2 1894 aa16.22■□□□□ 0.19
CCDC57-212ENST00000578910 NCOR1O75376 2440 aa16.21■□□□□ 0.19
CCDC57-212ENST00000578910 OFD1O75665 1012 aa16.21■□□□□ 0.19
CCDC57-212ENST00000578910 DGAT1O75907 488 aa16.21■□□□□ 0.19
CCDC57-212ENST00000578910 U2AF2P26368 475 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCDC57-212ENST00000578910 ARL2P36404 184 aa16.21■□□□□ 0.19
CCDC57-212ENST00000578910 TOB1P50616 345 aaPredicted RBP16.21■□□□□ 0.19
CCDC57-212ENST00000578910 PTENP60484 403 aa16.21■□□□□ 0.19
CCDC57-212ENST00000578910 MXD4Q14582 209 aaPredicted RBP16.21■□□□□ 0.19
CCDC57-212ENST00000578910 NBR1Q14596 966 aa16.21■□□□□ 0.19
CCDC57-212ENST00000578910 TTC38Q5R3I4 469 aa16.21■□□□□ 0.19
CCDC57-212ENST00000578910 AGMOQ6ZNB7 445 aa16.21■□□□□ 0.19
CCDC57-212ENST00000578910 MRPL10Q7Z7H8 261 aaKnown RBP16.21■□□□□ 0.19
CCDC57-212ENST00000578910 EFHBQ8N7U6 833 aa16.21■□□□□ 0.19
CCDC57-212ENST00000578910 ASAP3Q8TDY4 903 aa16.21■□□□□ 0.19
CCDC57-212ENST00000578910 POLR3CQ9BUI4 534 aaPredicted RBP16.21■□□□□ 0.19
CCDC57-212ENST00000578910 TUFT1Q9NNX1 390 aa16.21■□□□□ 0.19
CCDC57-212ENST00000578910 CLEC1BQ9P126 229 aa16.21■□□□□ 0.19
CCDC57-212ENST00000578910 LZTS1Q9Y250 596 aa16.21■□□□□ 0.19
CCDC57-212ENST00000578910 PCDHB2Q9Y5E7 798 aa16.21■□□□□ 0.19
CCDC57-212ENST00000578910 FSCN2O14926 492 aa16.2■□□□□ 0.18
CCDC57-212ENST00000578910 MBTPS2O43462 519 aa16.2■□□□□ 0.18
CCDC57-212ENST00000578910 TBX10O75333 385 aa16.2■□□□□ 0.18
CCDC57-212ENST00000578910 OR52Z1P0C646 297 aa16.2■□□□□ 0.18
CCDC57-212ENST00000578910 ALDH7A1P49419 539 aaKnown RBP16.2■□□□□ 0.18
CCDC57-212ENST00000578910 RAB27AP51159 221 aa16.2■□□□□ 0.18
CCDC57-212ENST00000578910 BCAR1P56945 870 aa16.2■□□□□ 0.18
CCDC57-212ENST00000578910 RBM10P98175 930 aaKnown RBP16.2■□□□□ 0.18
CCDC57-212ENST00000578910 KRT17Q04695 432 aa16.2■□□□□ 0.18
CCDC57-212ENST00000578910 POU5F1BQ06416 359 aa16.2■□□□□ 0.18
CCDC57-212ENST00000578910 ORC2Q13416 577 aaPredicted RBP16.2■□□□□ 0.18
CCDC57-212ENST00000578910 UBXN11Q5T124 520 aa16.2■□□□□ 0.18
CCDC57-212ENST00000578910 PDE12Q6L8Q7 609 aaKnown RBP16.2■□□□□ 0.18
CCDC57-212ENST00000578910 MAEAQ7L5Y9 396 aa16.2■□□□□ 0.18
CCDC57-212ENST00000578910 GJD3Q8N144 294 aa16.2■□□□□ 0.18
CCDC57-212ENST00000578910 PGBD4Q96DM1 585 aa16.2■□□□□ 0.18
CCDC57-212ENST00000578910 MSLNLQ96KJ4 702 aa16.2■□□□□ 0.18
CCDC57-212ENST00000578910 NACC1Q96RE7 527 aa16.2■□□□□ 0.18
CCDC57-212ENST00000578910 ST18O60284 1047 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 CD2BP2O95400 341 aaKnown RBP16.19■□□□□ 0.18
CCDC57-212ENST00000578910 GLRA2P23416 452 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 RPA1P27694 616 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 TRAPPC10P48553 1259 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 NDUFV1P49821 464 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 CAPSQ13938 189 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 TFDP1Q14186 410 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 NOMO2Q5JPE7 1267 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 TMC7Q7Z402 723 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 IFNLR1Q8IU57 520 aaPredicted RBP16.19■□□□□ 0.18
CCDC57-212ENST00000578910 SLC39A11Q8N1S5 342 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 TMX3Q96JJ7 454 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 CCDC43Q96MW1 224 aaKnown RBP16.19■□□□□ 0.18
CCDC57-212ENST00000578910 MRPL9Q9BYD2 267 aaKnown RBP16.19■□□□□ 0.18
CCDC57-212ENST00000578910 NRDE2Q9H7Z3 1164 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 TBC1D13Q9NVG8 400 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 CD207Q9UJ71 328 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 NOL7Q9UMY1 257 aaKnown RBP16.19■□□□□ 0.18
CCDC57-212ENST00000578910 FAM50BQ9Y247 325 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 INPP5FQ9Y2H2 1132 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 PCDHB6Q9Y5E3 794 aa16.19■□□□□ 0.18
CCDC57-212ENST00000578910 BDP1A6H8Y1 2624 aa16.18■□□□□ 0.18
CCDC57-212ENST00000578910 HIDE1A8MVS5 230 aa16.18■□□□□ 0.18
CCDC57-212ENST00000578910 INO80B-WBP1J3KQ70 363 aa16.18■□□□□ 0.18
CCDC57-212ENST00000578910 USO1O60763 962 aaKnown RBP16.18■□□□□ 0.18
CCDC57-212ENST00000578910 GLP2RO95838 553 aa16.18■□□□□ 0.18
CCDC57-212ENST00000578910 PPM1AP35813 382 aa16.18■□□□□ 0.18
CCDC57-212ENST00000578910 AFF1P51825 1210 aaKnown RBP16.18■□□□□ 0.18
CCDC57-212ENST00000578910 PLPP4Q5VZY2 271 aa16.18■□□□□ 0.18
CCDC57-212ENST00000578910 GLB1LQ6UWU2 654 aa16.18■□□□□ 0.18
CCDC57-212ENST00000578910 ZNF280BQ86YH2 543 aa16.18■□□□□ 0.18
CCDC57-212ENST00000578910 SMG8Q8ND04 991 aaKnown RBP16.18■□□□□ 0.18
CCDC57-212ENST00000578910 CPB2Q96IY4 423 aa16.18■□□□□ 0.18
CCDC57-212ENST00000578910 TCF25Q9BQ70 676 aa16.18■□□□□ 0.18
CCDC57-212ENST00000578910 RNF39Q9H2S5 420 aa16.18■□□□□ 0.18
CCDC57-212ENST00000578910 NGRNQ9NPE2 291 aaKnown RBP16.18■□□□□ 0.18
CCDC57-212ENST00000578910 GPRC5CQ9NQ84 441 aa16.18■□□□□ 0.18
CCDC57-212ENST00000578910 DBR1Q9UK59 544 aaKnown RBP16.18■□□□□ 0.18
CCDC57-212ENST00000578910 TSPAN1O60635 241 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms