RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 CCDC43Q96MW1 224 aaKnown RBP25.56■■□□□ 1.68
VAPA-205ENST00000578314 FAM105AQ9NUU6 356 aa25.56■■□□□ 1.68
VAPA-205ENST00000578314 MUTP22033 750 aa25.55■■□□□ 1.68
VAPA-205ENST00000578314 KCNA5P22460 613 aa25.55■■□□□ 1.68
VAPA-205ENST00000578314 GJB2P29033 226 aa25.55■■□□□ 1.68
VAPA-205ENST00000578314 HOXA11P31270 313 aaPredicted RBP25.55■■□□□ 1.68
VAPA-205ENST00000578314 RAB27AP51159 221 aa25.55■■□□□ 1.68
VAPA-205ENST00000578314 HYAL1Q12794 435 aa25.55■■□□□ 1.68
VAPA-205ENST00000578314 PDIA5Q14554 519 aa25.55■■□□□ 1.68
VAPA-205ENST00000578314 CTC1Q2NKJ3 1217 aa25.55■■□□□ 1.68
VAPA-205ENST00000578314 ASAP3Q8TDY4 903 aa25.55■■□□□ 1.68
VAPA-205ENST00000578314 PCDHB6Q9Y5E3 794 aa25.55■■□□□ 1.68
VAPA-205ENST00000578314 FGF18O76093 207 aa25.54■■□□□ 1.68
VAPA-205ENST00000578314 PTGDRQ13258 359 aa25.54■■□□□ 1.68
VAPA-205ENST00000578314 TFDP1Q14186 410 aa25.54■■□□□ 1.68
VAPA-205ENST00000578314 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.54■■□□□ 1.68
VAPA-205ENST00000578314 HELQQ8TDG4 1101 aa25.54■■□□□ 1.68
VAPA-205ENST00000578314 MYO7AQ13402 2215 aa25.53■■□□□ 1.68
VAPA-205ENST00000578314 IRS1P35568 1242 aa25.53■■□□□ 1.68
VAPA-205ENST00000578314 PLCB3Q01970 1234 aa25.53■■□□□ 1.68
VAPA-205ENST00000578314 HAUS3Q68CZ6 603 aa25.53■■□□□ 1.68
VAPA-205ENST00000578314 KCNT2Q6UVM3 1135 aa25.53■■□□□ 1.68
VAPA-205ENST00000578314 THNSL1Q8IYQ7 743 aa25.53■■□□□ 1.68
VAPA-205ENST00000578314 MRPL9Q9BYD2 267 aaKnown RBP25.53■■□□□ 1.68
VAPA-205ENST00000578314 NFKBIZQ9BYH8 718 aa25.53■■□□□ 1.68
VAPA-205ENST00000578314 LRWD1Q9UFC0 647 aa25.53■■□□□ 1.68
VAPA-205ENST00000578314 LZTS1Q9Y250 596 aa25.53■■□□□ 1.68
VAPA-205ENST00000578314 FNDC1Q4ZHG4 1894 aaPredicted RBP25.53■■□□□ 1.68
VAPA-205ENST00000578314 LAD1O00515 517 aa25.52■■□□□ 1.68
VAPA-205ENST00000578314 GLRA2P23416 452 aa25.52■■□□□ 1.68
VAPA-205ENST00000578314 CAPSQ13938 189 aa25.52■■□□□ 1.68
VAPA-205ENST00000578314 MCTP1Q6DN14 999 aa25.52■■□□□ 1.68
VAPA-205ENST00000578314 POTEGQ6S5H5 508 aa25.52■■□□□ 1.68
VAPA-205ENST00000578314 MRPL10Q7Z7H8 261 aaKnown RBP25.52■■□□□ 1.68
VAPA-205ENST00000578314 IGSF22Q8N9C0 903 aa25.52■■□□□ 1.68
VAPA-205ENST00000578314 MCPH1Q8NEM0 835 aa25.52■■□□□ 1.68
VAPA-205ENST00000578314 PPP2R3CQ969Q6 453 aa25.52■■□□□ 1.68
VAPA-205ENST00000578314 ZNF558Q96NG5 402 aa25.52■■□□□ 1.68
VAPA-205ENST00000578314 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.52■■□□□ 1.68
VAPA-205ENST00000578314 SMC3Q9UQE7 1217 aa25.52■■□□□ 1.68
VAPA-205ENST00000578314 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.52■■□□□ 1.68
VAPA-205ENST00000578314 PCDHB2Q9Y5E7 798 aa25.52■■□□□ 1.68
VAPA-205ENST00000578314 USO1O60763 962 aaKnown RBP25.51■■□□□ 1.67
VAPA-205ENST00000578314 AXLP30530 894 aa25.51■■□□□ 1.67
VAPA-205ENST00000578314 LTBRP36941 435 aa25.51■■□□□ 1.67
VAPA-205ENST00000578314 PUS10Q3MIT2 529 aaKnown RBP25.51■■□□□ 1.67
VAPA-205ENST00000578314 RILPL1Q5EBL4 403 aa25.51■■□□□ 1.67
VAPA-205ENST00000578314 UBXN11Q5T124 520 aa25.51■■□□□ 1.67
VAPA-205ENST00000578314 LPPQ93052 612 aa25.51■■□□□ 1.67
VAPA-205ENST00000578314 PGBD4Q96DM1 585 aa25.51■■□□□ 1.67
VAPA-205ENST00000578314 BACH2Q9BYV9 841 aa25.51■■□□□ 1.67
VAPA-205ENST00000578314 POLR3FQ9H1D9 316 aaPredicted RBP25.51■■□□□ 1.67
VAPA-205ENST00000578314 CLDND1Q9NY35 253 aa25.51■■□□□ 1.67
VAPA-205ENST00000578314 STK24Q9Y6E0 443 aa25.51■■□□□ 1.67
VAPA-205ENST00000578314 ATG2AQ2TAZ0 1938 aa25.51■■□□□ 1.67
VAPA-205ENST00000578314 H3BQV1 296 aa25.5■■□□□ 1.67
VAPA-205ENST00000578314 OFD1O75665 1012 aa25.5■■□□□ 1.67
VAPA-205ENST00000578314 CSPG5O95196 566 aa25.5■■□□□ 1.67
VAPA-205ENST00000578314 PPM1AP35813 382 aa25.5■■□□□ 1.67
VAPA-205ENST00000578314 PRPHP41219 470 aa25.5■■□□□ 1.67
VAPA-205ENST00000578314 MBTD1Q05BQ5 628 aa25.5■■□□□ 1.67
VAPA-205ENST00000578314 PDE12Q6L8Q7 609 aaKnown RBP25.5■■□□□ 1.67
VAPA-205ENST00000578314 GLB1LQ6UWU2 654 aa25.5■■□□□ 1.67
VAPA-205ENST00000578314 MRPS27Q92552 414 aaKnown RBP25.5■■□□□ 1.67
VAPA-205ENST00000578314 RAB34Q9BZG1 259 aa25.5■■□□□ 1.67
VAPA-205ENST00000578314 TLR9Q9NR96 1032 aa25.5■■□□□ 1.67
VAPA-205ENST00000578314 MEIS3P2A8K0S8 358 aa25.49■■□□□ 1.67
VAPA-205ENST00000578314 H3BQ06 376 aaPredicted RBP25.49■■□□□ 1.67
VAPA-205ENST00000578314 INO80B-WBP1J3KQ70 363 aa25.49■■□□□ 1.67
VAPA-205ENST00000578314 FSCN2O14926 492 aa25.49■■□□□ 1.67
VAPA-205ENST00000578314 TSPAN1O60635 241 aa25.49■■□□□ 1.67
VAPA-205ENST00000578314 ERLIN2O94905 339 aa25.49■■□□□ 1.67
VAPA-205ENST00000578314 CYP11B2P19099 503 aa25.49■■□□□ 1.67
VAPA-205ENST00000578314 GTF2F1P35269 517 aaKnown RBP eCLIP25.49■■□□□ 1.67
VAPA-205ENST00000578314 CCT6AP40227 531 aaKnown RBP25.49■■□□□ 1.67
VAPA-205ENST00000578314 ERVFC1P60507 584 aa25.49■■□□□ 1.67
VAPA-205ENST00000578314 ADAM15Q13444 863 aa25.49■■□□□ 1.67
VAPA-205ENST00000578314 ECM1Q16610 540 aa25.49■■□□□ 1.67
VAPA-205ENST00000578314 AMHR2Q16671 573 aa25.49■■□□□ 1.67
VAPA-205ENST00000578314 CCDC51Q96ER9 411 aa25.49■■□□□ 1.67
VAPA-205ENST00000578314 IGFLR1Q9H665 355 aa25.49■■□□□ 1.67
VAPA-205ENST00000578314 GPRC5CQ9NQ84 441 aa25.49■■□□□ 1.67
VAPA-205ENST00000578314 SPG21Q9NZD8 308 aa25.49■■□□□ 1.67
VAPA-205ENST00000578314 PUF60Q9UHX1 559 aaKnown RBP25.49■■□□□ 1.67
VAPA-205ENST00000578314 KIAA1671Q9BY89 1806 aa25.49■■□□□ 1.67
VAPA-205ENST00000578314 GRXCR2A6NFK2 248 aa25.48■■□□□ 1.67
VAPA-205ENST00000578314 NCBP1Q09161 790 aaKnown RBP25.48■■□□□ 1.67
VAPA-205ENST00000578314 IL17AQ16552 155 aa25.48■■□□□ 1.67
VAPA-205ENST00000578314 LONRF3Q496Y0 759 aa25.48■■□□□ 1.67
VAPA-205ENST00000578314 NOMO2Q5JPE7 1267 aa25.48■■□□□ 1.67
VAPA-205ENST00000578314 PTCRAQ6ISU1 281 aaPredicted RBP25.48■■□□□ 1.67
VAPA-205ENST00000578314 PADI6Q6TGC4 694 aa25.48■■□□□ 1.67
VAPA-205ENST00000578314 AGMOQ6ZNB7 445 aa25.48■■□□□ 1.67
VAPA-205ENST00000578314 EP400NLQ6ZTU2 488 aa25.48■■□□□ 1.67
VAPA-205ENST00000578314 ADGRD2Q7Z7M1 963 aa25.48■■□□□ 1.67
VAPA-205ENST00000578314 SLC39A11Q8N1S5 342 aa25.48■■□□□ 1.67
VAPA-205ENST00000578314 CNNM3Q8NE01 707 aa25.48■■□□□ 1.67
VAPA-205ENST00000578314 MICAL1Q8TDZ2 1067 aa25.48■■□□□ 1.67
VAPA-205ENST00000578314 ARHGEF35A5YM69 484 aa25.47■■□□□ 1.67
VAPA-205ENST00000578314 NCLP19338 710 aaKnown RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms