RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 CAMK4Q16566 473 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 NT5DC1Q5TFE4 455 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 ANKRD33Q7Z3H0 272 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 DAW1Q8N136 415 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 SPATA20Q8TB22 786 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 DIS3LQ8TF46 1054 aaKnown RBP12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 TOX2Q96NM4 488 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 BLZF1Q9H2G9 400 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 OLFML3Q9NRN5 406 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 PANK4Q9NVE7 773 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 SUCLA2Q9P2R7 463 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 AKT3Q9Y243 479 aa12.37□□□□□ -0.43
TRAPPC8-204ENST00000578252 NPHP3-ACAD11A0A0J9YXS1 232 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 DCDC2CA8MYV0 355 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 RHOBTB3O94955 611 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 MAPTP10636 758 aaKnown RBP12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 EN2P19622 333 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 SMTNP53814 917 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 ZNF200P98182 395 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 ALCAMQ13740 583 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 HIC1Q14526 733 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 HERC4Q5GLZ8 1057 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 ODR4Q5SWX8 454 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 RBM43Q6ZSC3 357 aaKnown RBP12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 NYAP1Q6ZVC0 841 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 STXBP4Q6ZWJ1 553 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 MAEAQ7L5Y9 396 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 UBE2Q1Q7Z7E8 422 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 ZNF410Q86VK4 478 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 FAM126BQ8IXS8 530 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 KIAA0319LQ8IZA0 1049 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 TNS4Q8IZW8 715 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 LRRC71Q8N4P6 559 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 MYCT1Q8N699 235 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 TRIML1Q8N9V2 468 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 SPIRE2Q8WWL2 714 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 PRPF31Q8WWY3 499 aaKnown RBP12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 TMEM143Q96AN5 459 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 ZHX3Q9H4I2 956 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 GPRC5CQ9NQ84 441 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 TMEM63CQ9P1W3 806 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 PCDHA5Q9Y5H7 936 aa12.36□□□□□ -0.43
TRAPPC8-204ENST00000578252 RSPH10B2B2RC85 870 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 M0QZ92 97 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 KLRC4O43908 158 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 B4GALT4O60513 344 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 CD4P01730 458 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 RSPH10BP0C881 870 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 GLRA2P23416 452 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 CASP1P29466 404 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 PHKA2P46019 1235 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 SARSP49591 514 aaKnown RBP12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 EHHADHQ08426 723 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 RBL2Q08999 1139 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 LAMTOR4Q0VGL1 99 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 COASYQ13057 564 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 FAM26FQ5R3K3 315 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 RUFY4Q6ZNE9 571 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 RHPN2Q8IUC4 686 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 FAM178BQ8IXR5 827 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 CAGE1Q8TC20 777 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 PPP1R13LQ8WUF5 828 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 NTPCRQ9BSD7 190 aaKnown RBP12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 NFKBIZQ9BYH8 718 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 FAM49AQ9H0Q0 323 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 C2orf40Q9H1Z8 148 aa12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 TRMT13Q9NUP7 481 aaKnown RBP12.35□□□□□ -0.43
TRAPPC8-204ENST00000578252 SIP14410 1827 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 PQBP1O60828 265 aaKnown RBP12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 KIF20AO95235 890 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 PPP1R2P41236 205 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 NPTX2P47972 431 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 GPC3P51654 580 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 EFNA5P52803 228 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 NCKAP1LP55160 1127 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 PEX3P56589 373 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 SOX10P56693 466 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 MRPS6P82932 125 aaKnown RBP12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 DRP2Q13474 957 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 BFSP2Q13515 415 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 CAPSQ13938 189 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 TRIM60Q495X7 471 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 KMT5BQ4FZB7 885 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 SFR1Q86XK3 245 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 ZBTB8OSQ8IWT0 167 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 DEPTORQ8TB45 409 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 ASAP3Q8TDY4 903 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 DNAJB3Q8WWF6 145 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 KCNN1Q92952 543 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 HVCN1Q96D96 273 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 ZBTB10Q96DT7 871 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 SCLT1Q96NL6 688 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 CTAGE1Q96RT6 745 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 INO80BQ9C086 356 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 TRPV6Q9H1D0 765 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 ST6GALNAC4Q9H4F1 302 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 MRPL44Q9H9J2 332 aaKnown RBP12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 KMT5AQ9NQR1 393 aa12.34□□□□□ -0.43
TRAPPC8-204ENST00000578252 UBE4BO95155 1302 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms