RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 NLRC5Q86WI3 1866 aa24.58■■□□□ 1.53
SMARCD2-206ENST00000577990 ERVK-21P61565 698 aa24.58■■□□□ 1.53
SMARCD2-206ENST00000577990 CSRNP2Q9H175 543 aa24.58■■□□□ 1.53
SMARCD2-206ENST00000577990 AGPAT5Q9NUQ2 364 aa24.58■■□□□ 1.53
SMARCD2-206ENST00000577990 THEGQ9P2T0 379 aa24.58■■□□□ 1.53
SMARCD2-206ENST00000577990 MTCH2Q9Y6C9 303 aa24.58■■□□□ 1.53
SMARCD2-206ENST00000577990 NCOR1O75376 2440 aa24.58■■□□□ 1.53
SMARCD2-206ENST00000577990 BRWD1Q9NSI6 2320 aa24.58■■□□□ 1.53
SMARCD2-206ENST00000577990 MUC3AQ02505 3323 aa24.57■■□□□ 1.52
SMARCD2-206ENST00000577990 LRRIQ4A6NIV6 560 aa24.57■■□□□ 1.52
SMARCD2-206ENST00000577990 BTG3Q14201 252 aaPredicted RBP24.57■■□□□ 1.52
SMARCD2-206ENST00000577990 STK38Q15208 465 aa24.57■■□□□ 1.52
SMARCD2-206ENST00000577990 PCBP1Q15365 356 aaKnown RBP eCLIP24.57■■□□□ 1.522e-6■■■■□ 20
SMARCD2-206ENST00000577990 TWF2Q6IBS0 349 aaKnown RBP24.57■■□□□ 1.52
SMARCD2-206ENST00000577990 FIBCD1Q8N539 461 aa24.57■■□□□ 1.52
SMARCD2-206ENST00000577990 RASSF8Q8NHQ8 419 aa24.57■■□□□ 1.52
SMARCD2-206ENST00000577990 GDPD5Q8WTR4 605 aa24.57■■□□□ 1.52
SMARCD2-206ENST00000577990 KIFAP3Q92845 792 aa24.57■■□□□ 1.52
SMARCD2-206ENST00000577990 RUSC1Q9BVN2 902 aa24.57■■□□□ 1.52
SMARCD2-206ENST00000577990 TCF20Q9UGU0 1960 aaKnown RBP24.56■■□□□ 1.52
SMARCD2-206ENST00000577990 A0A0U1RQF3 1178 aa24.56■■□□□ 1.52
SMARCD2-206ENST00000577990 INO80B-WBP1J3KQ70 363 aa24.56■■□□□ 1.52
SMARCD2-206ENST00000577990 GTPBP6O43824 516 aaPredicted RBP24.56■■□□□ 1.52
SMARCD2-206ENST00000577990 ERLIN2O94905 339 aa24.56■■□□□ 1.52
SMARCD2-206ENST00000577990 MBTD1Q05BQ5 628 aa24.56■■□□□ 1.52
SMARCD2-206ENST00000577990 KARSQ15046 597 aaKnown RBP24.56■■□□□ 1.52
SMARCD2-206ENST00000577990 RINT1Q6NUQ1 792 aa24.56■■□□□ 1.52
SMARCD2-206ENST00000577990 ECHDC2Q86YB7 292 aa24.56■■□□□ 1.52
SMARCD2-206ENST00000577990 CMTR2Q8IYT2 770 aaKnown RBP24.56■■□□□ 1.52
SMARCD2-206ENST00000577990 KRI1Q8N9T8 703 aaKnown RBP24.56■■□□□ 1.52
SMARCD2-206ENST00000577990 LINC00301Q8NCQ3 95 aa24.56■■□□□ 1.52
SMARCD2-206ENST00000577990 BSNDQ8WZ55 320 aa24.56■■□□□ 1.52
SMARCD2-206ENST00000577990 CLIC6Q96NY7 704 aa24.56■■□□□ 1.52
SMARCD2-206ENST00000577990 CCSER1Q9C0I3 900 aa24.56■■□□□ 1.52
SMARCD2-206ENST00000577990 SSBP05455 408 aaKnown RBP eCLIP24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 PLA2G4BP0C869 781 aa24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 GATMP50440 423 aa24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 PPP2R5AQ15172 486 aa24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 TJAP1Q5JTD0 557 aa24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 SPECC1Q5M775 1068 aa24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 CDCA2Q69YH5 1023 aaPredicted RBP24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 C1orf186Q6ZWK4 172 aa24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 ZBTB8OSQ8IWT0 167 aa24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 SYT2Q8N9I0 419 aaPredicted RBP24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 EPSTI1Q96J88 318 aa24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 IFT74Q96LB3 600 aa24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 SAMD11Q96NU1 681 aa24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 C17orf80Q9BSJ5 609 aa24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 TRAIPQ9BWF2 469 aa24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 TFIP11Q9UBB9 837 aaKnown RBP24.55■■□□□ 1.52
SMARCD2-206ENST00000577990 TSPAN1O60635 241 aa24.54■■□□□ 1.52
SMARCD2-206ENST00000577990 LPXNO60711 386 aa24.54■■□□□ 1.52
SMARCD2-206ENST00000577990 YEATS4O95619 227 aa24.54■■□□□ 1.52
SMARCD2-206ENST00000577990 PLCG1P19174 1290 aa24.54■■□□□ 1.52
SMARCD2-206ENST00000577990 HOXA11P31270 313 aaPredicted RBP24.54■■□□□ 1.52
SMARCD2-206ENST00000577990 NAMPTP43490 491 aa24.54■■□□□ 1.52
SMARCD2-206ENST00000577990 SLC12A3P55017 1021 aa24.54■■□□□ 1.52
SMARCD2-206ENST00000577990 SKIV2LQ15477 1246 aaKnown RBP24.54■■□□□ 1.52
SMARCD2-206ENST00000577990 FOXD4L6Q3SYB3 417 aaPredicted RBP24.54■■□□□ 1.52
SMARCD2-206ENST00000577990 PAN2Q504Q3 1202 aaKnown RBP24.54■■□□□ 1.52
SMARCD2-206ENST00000577990 FOXD4L3Q6VB84 417 aaPredicted RBP24.54■■□□□ 1.52
SMARCD2-206ENST00000577990 SYMPKQ92797 1274 aaKnown RBP24.54■■□□□ 1.52
SMARCD2-206ENST00000577990 TIPINQ9BVW5 301 aa24.54■■□□□ 1.52
SMARCD2-206ENST00000577990 C2orf40Q9H1Z8 148 aa24.54■■□□□ 1.52
SMARCD2-206ENST00000577990 POLD4Q9HCU8 107 aa24.54■■□□□ 1.52
SMARCD2-206ENST00000577990 RALGAPA2Q2PPJ7 1873 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 FNDC1Q4ZHG4 1894 aaPredicted RBP24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 SPTLC2O15270 562 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 HOXA2O43364 376 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 HIP1RO75146 1068 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 BRD1O95696 1058 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 EOMESO95936 686 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 SKIP12755 728 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 GUCY2CP25092 1073 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 AXLP30530 894 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 RAB27AP51159 221 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 USP49Q70CQ1 688 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 ZNF598Q86UK7 904 aaKnown RBP24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 RNF169Q8NCN4 708 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 DEPTORQ8TB45 409 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 LRRC15Q8TF66 581 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 DRC1Q96MC2 740 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 FAM105AQ9NUU6 356 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 KCND2Q9NZV8 630 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 BDP1A6H8Y1 2624 aa24.53■■□□□ 1.52
SMARCD2-206ENST00000577990 TBKBP1A7MCY6 615 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 PPP6R2O75170 966 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 FGFR1P11362 822 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 ATF7P17544 494 aaPredicted RBP24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 POU3F3P20264 500 aaPredicted RBP24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 TXLNAP40222 546 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 NCBP1Q09161 790 aaKnown RBP24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 AMHR2Q16671 573 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 EPC2Q52LR7 807 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 ATL3Q6DD88 541 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 TMEM192Q8IY95 271 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 DAW1Q8N136 415 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 FBXO22Q8NEZ5 403 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 RAD54LQ92698 747 aa24.52■■□□□ 1.52
SMARCD2-206ENST00000577990 CLP1Q92989 425 aaKnown RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms