RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 NCOR1O75376 2440 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 DDX39AO00148 427 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 PRC1O43663 620 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 HBP1O60381 514 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 FGFR1P11362 822 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 LAG3P18627 525 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 RXRAP19793 462 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 KRT17Q04695 432 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 FAM160B1Q5W0V3 765 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 ANKRD54Q6NXT1 300 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 PLPPR4Q7Z2D5 763 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 TRMT1LQ7Z2T5 733 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 TMC7Q7Z402 723 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 RAB11FIP4Q86YS3 637 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 ABI1Q8IZP0 508 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 METTL13Q8N6R0 699 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 COLGALT1Q8NBJ5 622 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 KREMEN2Q8NCW0 462 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 VN1R2Q8NFZ6 395 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 ATP8B4Q8TF62 1192 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 SUSD6Q92537 303 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 ZNF837Q96EG3 531 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 ASIC4Q96FT7 647 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 RIPOR3Q96MK2 946 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 TCF25Q9BQ70 676 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 S1PR5Q9H228 398 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 LY9Q9HBG7 655 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 ERVK-5Q9HDB9 667 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 RGS18Q9NS28 235 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 KCNH7Q9NS40 1196 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 NR2E1Q9Y466 385 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 TAF6LQ9Y6J9 622 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 KIAA1217Q5T5P2 1943 aa7.81□□□□□ -1.16
SMARCE1-212ENST00000577721 MICAL3Q7RTP6 2002 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 CFAP99D6REC4 459 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 OIP5O43482 229 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 MGEA5O60502 916 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 PDGFBP01127 241 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 CALM1P0DP23 149 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 CALM2P0DP24 149 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 CALM3P0DP25 149 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 ARP10275 920 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 HOXB8P17481 243 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 CHMLP26374 656 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 SLC26A2P50443 739 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 ANTXR2P58335 489 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 SNRPNP63162 240 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 BMS1Q14692 1282 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 KIZQ2M2Z5 673 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 TPRNQ4KMQ1 711 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 CES5AQ6NT32 575 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 PDXDC2PQ6P474 469 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 SYNE3Q6ZMZ3 975 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 LYSMD3Q7Z3D4 306 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 TRIM22Q8IYM9 498 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 KIAA0319LQ8IZA0 1049 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 RNF169Q8NCN4 708 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 CYP2W1Q8TAV3 490 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 MRPS27Q92552 414 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 PGBD1Q96JS3 809 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 ZNF558Q96NG5 402 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 KRTAP9-9Q9BYP9 154 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 KRTAP9-4Q9BYQ2 154 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 MFSD1Q9H3U5 465 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 ZNF395Q9H8N7 513 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 AGO4Q9HCK5 861 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 NGRNQ9NPE2 291 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 SLC12A7Q9Y666 1083 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 MYH7BA7E2Y1 1941 aa7.8□□□□□ -1.16
SMARCE1-212ENST00000577721 NFASCO94856 1347 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 KDM3AQ9Y4C1 1321 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 MUC6Q6W4X9 2439 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 SCO2A0A1W2PP80 73 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 HIDE1A8MVS5 230 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 C9IYK1 514 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 FSCN2O14926 492 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 CXCL14O95715 111 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 ZSCAN20P17040 1043 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 MCM5P33992 734 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 CRYBB1P53674 252 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 NAPAP54920 295 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 PLCB3Q01970 1234 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 CEP55Q53EZ4 464 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 ZNF484Q5JVG2 852 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 TTC22Q5TAA0 569 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 SWSAP1Q6NVH7 229 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 MIS18BP1Q6P0N0 1132 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 SYCE2Q6PIF2 218 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 KCNT2Q6UVM3 1135 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 TMEM184AQ6ZMB5 413 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 FAM43BQ6ZT52 329 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 MB21D2Q8IYB1 491 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 UBALD2Q8IYN6 164 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 EXOC6Q8TAG9 804 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 CASP10Q92851 521 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 TMEM87BQ96K49 555 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 OSMRQ99650 979 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 TMEM117Q9H0C3 514 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 CWH43Q9H720 699 aa7.79□□□□□ -1.16
SMARCE1-212ENST00000577721 ZNF302Q9NR11 478 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms