RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 KIAA1841Q6NSI8 718 aa13.26□□□□□ -0.29
CDH8-202ENST00000577228 B3GNT9Q6UX72 402 aa13.26□□□□□ -0.29
CDH8-202ENST00000577228 CATSPER4Q7RTX7 472 aa13.26□□□□□ -0.29
CDH8-202ENST00000577228 DDX53Q86TM3 631 aaKnown RBP13.26□□□□□ -0.29
CDH8-202ENST00000577228 ATOH1Q92858 354 aaPredicted RBP13.26□□□□□ -0.29
CDH8-202ENST00000577228 IGSF21Q96ID5 467 aa13.26□□□□□ -0.29
CDH8-202ENST00000577228 NLRP4Q96MN2 994 aa13.26□□□□□ -0.29
CDH8-202ENST00000577228 FAM105AQ9NUU6 356 aa13.26□□□□□ -0.29
CDH8-202ENST00000577228 TBC1D13Q9NVG8 400 aa13.26□□□□□ -0.29
CDH8-202ENST00000577228 IRAK3Q9Y616 596 aa13.26□□□□□ -0.29
CDH8-202ENST00000577228 GFRA3O60609 400 aa13.25□□□□□ -0.29
CDH8-202ENST00000577228 MAFO75444 373 aaPredicted RBP13.25□□□□□ -0.29
CDH8-202ENST00000577228 GALTP07902 379 aa13.25□□□□□ -0.29
CDH8-202ENST00000577228 EPCAMP16422 314 aa13.25□□□□□ -0.29
CDH8-202ENST00000577228 PSMC5P62195 406 aa13.25□□□□□ -0.29
CDH8-202ENST00000577228 ATAT1Q5SQI0 421 aa13.25□□□□□ -0.29
CDH8-202ENST00000577228 BLIDQ8IZY5 108 aa13.25□□□□□ -0.29
CDH8-202ENST00000577228 ETNPPLQ8TBG4 499 aa13.25□□□□□ -0.29
CDH8-202ENST00000577228 SLC22A17Q8WUG5 538 aa13.25□□□□□ -0.29
CDH8-202ENST00000577228 BCL7CQ8WUZ0 217 aaPredicted RBP13.25□□□□□ -0.29
CDH8-202ENST00000577228 JPH2Q9BR39 696 aaPredicted RBP13.25□□□□□ -0.29
CDH8-202ENST00000577228 GBP3Q9H0R5 595 aa13.25□□□□□ -0.29
CDH8-202ENST00000577228 NRDE2Q9H7Z3 1164 aa13.25□□□□□ -0.29
CDH8-202ENST00000577228 DBR1Q9UK59 544 aaKnown RBP13.25□□□□□ -0.29
CDH8-202ENST00000577228 MEIS3P2A8K0S8 358 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 H0Y858 1186 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 CPLX1O14810 134 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 GALR2O43603 387 aaPredicted RBP13.24□□□□□ -0.29
CDH8-202ENST00000577228 ZNF623O75123 536 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 OFD1O75665 1012 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 REC8O95072 547 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 DEXIO95424 95 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 ASGR2P07307 311 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 SLC11A1P49279 550 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 NONOQ15233 471 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDH8-202ENST00000577228 PLA2G4FQ68DD2 849 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 KANK3Q6NY19 840 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 MOXD1Q6UVY6 613 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 ANO5Q75V66 913 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 CABP7Q86V35 215 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 PPFIBP1Q86W92 1011 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 KSR1Q8IVT5 923 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 ZDHHC14Q8IZN3 488 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 DAGLBQ8NCG7 672 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 URGCPQ8TCY9 931 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 PGBD4Q96DM1 585 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 MBOAT7Q96N66 472 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 SMOC2Q9H3U7 446 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 DNAJB4Q9UDY4 337 aa13.24□□□□□ -0.29
CDH8-202ENST00000577228 DDX25Q9UHL0 483 aaKnown RBP13.24□□□□□ -0.29
CDH8-202ENST00000577228 SPDYE4A6NLX3 237 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 M0R2N6 131 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 TOB2Q14106 344 aaPredicted RBP13.23□□□□□ -0.29
CDH8-202ENST00000577228 PTPN14Q15678 1187 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 GALNT17Q6IS24 598 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 TMC5Q6UXY8 1006 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 RUFY3Q7L099 469 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 KRT25Q7Z3Z0 450 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 FAM177A1Q8N128 213 aaPredicted RBP13.23□□□□□ -0.29
CDH8-202ENST00000577228 PLCD3Q8N3E9 789 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 SLC7A3Q8WY07 619 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 VN1R3Q9BXE9 311 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 EMILIN2Q9BXX0 1053 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 SFXN1Q9H9B4 322 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 CYP26B1Q9NR63 512 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 AGPAT5Q9NUQ2 364 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 STK39Q9UEW8 545 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 LIMD1Q9UGP4 676 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 USTQ9Y2C2 406 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 PCDHB2Q9Y5E7 798 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 COL4A3BPQ9Y5P4 624 aa13.23□□□□□ -0.29
CDH8-202ENST00000577228 EML1O00423 815 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 SLC37A4O43826 429 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 B4GALT3O60512 393 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 DKC1O60832 514 aaKnown RBP eCLIP13.22□□□□□ -0.29
CDH8-202ENST00000577228 SSBP05455 408 aaKnown RBP eCLIP13.22□□□□□ -0.29
CDH8-202ENST00000577228 QARSP47897 775 aaKnown RBP13.22□□□□□ -0.29
CDH8-202ENST00000577228 NPEPPSP55786 919 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 NPY5RQ15761 445 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 INF2Q27J81 1249 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 LETM2Q2VYF4 491 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 CPLX2Q6PUV4 134 aaKnown RBP13.22□□□□□ -0.29
CDH8-202ENST00000577228 AGMOQ6ZNB7 445 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 ZNF280BQ86YH2 543 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 TMEM105Q8N8V8 129 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 PSPC1Q8WXF1 523 aaKnown RBP13.22□□□□□ -0.29
CDH8-202ENST00000577228 CEP170P1Q96L14 293 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 AIFM3Q96NN9 605 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 FAM193BQ96PV7 902 aaPredicted RBP13.22□□□□□ -0.29
CDH8-202ENST00000577228 MFSD1Q9H3U5 465 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 RSAD1Q9HA92 442 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 IFT122Q9HBG6 1241 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 MYO10Q9HD67 2058 aa13.22□□□□□ -0.29
CDH8-202ENST00000577228 CNTNAP2Q9UHC6 1331 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 KLRC2P26717 231 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 RFC5P40937 340 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 PPP2R5CQ13362 524 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 ASTLQ6HA08 431 aaPredicted RBP13.21□□□□□ -0.29
CDH8-202ENST00000577228 CCDC149Q6ZUS6 474 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 OTOP3Q7RTS5 596 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms