RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 FOSBP53539 338 aa13.51□□□□□ -0.25
PRPF8-215ENST00000576958 SIGLEC14Q08ET2 396 aa13.51□□□□□ -0.25
PRPF8-215ENST00000576958 SMC1AQ14683 1233 aaKnown RBP13.51□□□□□ -0.25
PRPF8-215ENST00000576958 AGMOQ6ZNB7 445 aa13.51□□□□□ -0.25
PRPF8-215ENST00000576958 TAS1R1Q7RTX1 841 aa13.51□□□□□ -0.25
PRPF8-215ENST00000576958 BMP8AQ7Z5Y6 402 aa13.51□□□□□ -0.25
PRPF8-215ENST00000576958 FBXL6Q8N531 539 aa13.51□□□□□ -0.25
PRPF8-215ENST00000576958 KREMEN2Q8NCW0 462 aa13.51□□□□□ -0.25
PRPF8-215ENST00000576958 GCOM2Q9BZD3 368 aaPredicted RBP13.51□□□□□ -0.25
PRPF8-215ENST00000576958 RNF39Q9H2S5 420 aa13.51□□□□□ -0.25
PRPF8-215ENST00000576958 NGRNQ9NPE2 291 aaKnown RBP13.51□□□□□ -0.25
PRPF8-215ENST00000576958 FAM105AQ9NUU6 356 aa13.51□□□□□ -0.25
PRPF8-215ENST00000576958 RGL1Q9NZL6 768 aa13.51□□□□□ -0.25
PRPF8-215ENST00000576958 PUF60Q9UHX1 559 aaKnown RBP13.51□□□□□ -0.25
PRPF8-215ENST00000576958 C2orf16Q68DN1 1984 aa13.51□□□□□ -0.25
PRPF8-215ENST00000576958 ZFHX2Q9C0A1 2572 aaPredicted RBP13.5□□□□□ -0.25
PRPF8-215ENST00000576958 HOXA2O43364 376 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 LARGE1O95461 756 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 GALTP07902 379 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 SRGAP2CP0DJJ0 459 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 PSMA5P28066 241 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 PPM1AP35813 382 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 KRT17Q04695 432 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 CTTNQ14247 550 aaKnown RBP13.5□□□□□ -0.25
PRPF8-215ENST00000576958 NONOQ15233 471 aaKnown RBP eCLIP13.5□□□□□ -0.25
PRPF8-215ENST00000576958 MCTP2Q6DN12 878 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 TMC5Q6UXY8 1006 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 CATSPER4Q7RTX7 472 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 POTEDQ86YR6 584 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 DAGLBQ8NCG7 672 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 ST13P5Q8NFI4 369 aaPredicted RBP13.5□□□□□ -0.25
PRPF8-215ENST00000576958 SLC22A17Q8WUG5 538 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 PRPF31Q8WWY3 499 aaKnown RBP13.5□□□□□ -0.25
PRPF8-215ENST00000576958 IGSF21Q96ID5 467 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 PHF20Q9BVI0 1012 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 KCNMB3Q9NPA1 279 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 CYP26B1Q9NR63 512 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 CACNG4Q9UBN1 327 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 TPCN1Q9ULQ1 816 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 PLXNA3P51805 1871 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 DENND4AQ7Z401 1863 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 CACNA1HO95180 2353 aa13.5□□□□□ -0.25
PRPF8-215ENST00000576958 H0Y858 1186 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 DEXIO95424 95 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 EOMESO95936 686 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 POMCP01189 267 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 AVPR2P30518 371 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 HOXA11P31270 313 aaPredicted RBP13.49□□□□□ -0.25
PRPF8-215ENST00000576958 PSMC5P62195 406 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 CYP4A11Q02928 519 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 NR5A1Q13285 461 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 NOMO2Q5JPE7 1267 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 PDE12Q6L8Q7 609 aaKnown RBP13.49□□□□□ -0.25
PRPF8-215ENST00000576958 PIK3AP1Q6ZUJ8 805 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 ZBTB33Q86T24 672 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 TMEM105Q8N8V8 129 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 RABGGTAQ92696 567 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 CASP10Q92851 521 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 TMEM169Q96HH4 297 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 DYDC2Q96IM9 177 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 B3GALT6Q96L58 329 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 EIF2AQ9BY44 585 aaKnown RBP13.49□□□□□ -0.25
PRPF8-215ENST00000576958 ADAM7Q9H2U9 754 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 XPNPEP1Q9NQW7 623 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 LIMD1Q9UGP4 676 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 HES2Q9Y543 173 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 PCDHB2Q9Y5E7 798 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 CYP46A1Q9Y6A2 500 aa13.49□□□□□ -0.25
PRPF8-215ENST00000576958 C2CD2LO14523 706 aa13.48□□□□□ -0.25
PRPF8-215ENST00000576958 SFPQP23246 707 aaKnown RBP eCLIP13.48□□□□□ -0.25
PRPF8-215ENST00000576958 ALDH7A1P49419 539 aaKnown RBP13.48□□□□□ -0.25
PRPF8-215ENST00000576958 SPIRE1Q08AE8 756 aa13.48□□□□□ -0.25
PRPF8-215ENST00000576958 PPP2R5CQ13362 524 aa13.48□□□□□ -0.25
PRPF8-215ENST00000576958 PTPN14Q15678 1187 aa13.48□□□□□ -0.25
PRPF8-215ENST00000576958 NCAPH2Q6IBW4 605 aa13.48□□□□□ -0.25
PRPF8-215ENST00000576958 CDR2LQ86X02 465 aaPredicted RBP13.48□□□□□ -0.25
PRPF8-215ENST00000576958 SUGP1Q8IWZ8 645 aaKnown RBP13.48□□□□□ -0.25
PRPF8-215ENST00000576958 TRIM22Q8IYM9 498 aa13.48□□□□□ -0.25
PRPF8-215ENST00000576958 NECAB1Q8N987 351 aa13.48□□□□□ -0.25
PRPF8-215ENST00000576958 SMG8Q8ND04 991 aaKnown RBP13.48□□□□□ -0.25
PRPF8-215ENST00000576958 ZNF274Q96GC6 653 aaPredicted RBP13.48□□□□□ -0.25
PRPF8-215ENST00000576958 CPB2Q96IY4 423 aa13.48□□□□□ -0.25
PRPF8-215ENST00000576958 CEP170P1Q96L14 293 aa13.48□□□□□ -0.25
PRPF8-215ENST00000576958 LXNQ9BS40 222 aa13.48□□□□□ -0.25
PRPF8-215ENST00000576958 SLKQ9H2G2 1235 aaPredicted RBP13.48□□□□□ -0.25
PRPF8-215ENST00000576958 PDRG1Q9NUG6 133 aa13.48□□□□□ -0.25
PRPF8-215ENST00000576958 AGPAT5Q9NUQ2 364 aa13.48□□□□□ -0.25
PRPF8-215ENST00000576958 MARCH5Q9NX47 278 aa13.48□□□□□ -0.25
PRPF8-215ENST00000576958 MIOSQ9NXC5 875 aa13.48□□□□□ -0.25
PRPF8-215ENST00000576958 COL4A3BPQ9Y5P4 624 aa13.48□□□□□ -0.25
PRPF8-215ENST00000576958 CPLX1O14810 134 aa13.47□□□□□ -0.25
PRPF8-215ENST00000576958 CCNT1O60563 726 aaKnown RBP13.47□□□□□ -0.25
PRPF8-215ENST00000576958 N4BP1O75113 896 aaKnown RBP13.47□□□□□ -0.25
PRPF8-215ENST00000576958 REC8O95072 547 aa13.47□□□□□ -0.25
PRPF8-215ENST00000576958 CTSAP10619 480 aa13.47□□□□□ -0.25
PRPF8-215ENST00000576958 FDPSP14324 419 aaKnown RBP13.47□□□□□ -0.25
PRPF8-215ENST00000576958 LAMTOR4Q0VGL1 99 aa13.47□□□□□ -0.25
PRPF8-215ENST00000576958 POTEGQ6S5H5 508 aa13.47□□□□□ -0.25
PRPF8-215ENST00000576958 KRT25Q7Z3Z0 450 aa13.47□□□□□ -0.25
PRPF8-215ENST00000576958 DDX53Q86TM3 631 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms