RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 CAND2O75155 1236 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 BBOX1O75936 387 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 ITPK1Q13572 414 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 TRADDQ15628 312 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 CYB5D1Q6P9G0 228 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 FAM213AQ9BRX8 229 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 SUFUQ9UMX1 484 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 SKAP2O75563 359 aaPredicted RBP19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 LUC7L3O95232 432 aaKnown RBP19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 SPARCL1Q14515 664 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 CDO1Q16878 200 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 NKX2-3Q8TAU0 364 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 MROH1Q8NDA8 1641 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 GPSM2P81274 684 aa19.14■□□□□ 0.66
ATPAF1-214ENST00000576409 KIF22Q14807 665 aa19.14■□□□□ 0.66
ATPAF1-214ENST00000576409 CENPPQ6IPU0 288 aa19.14■□□□□ 0.66
ATPAF1-214ENST00000576409 FBXL16Q8N461 479 aa19.14■□□□□ 0.66
ATPAF1-214ENST00000576409 DCLK2Q8N568 766 aa19.14■□□□□ 0.66
ATPAF1-214ENST00000576409 PPARGC1AQ9UBK2 798 aaKnown RBP19.14■□□□□ 0.66
ATPAF1-214ENST00000576409 PCSK1NQ9UHG2 260 aa19.14■□□□□ 0.66
ATPAF1-214ENST00000576409 ABCB11O95342 1321 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 GYG2O15488 501 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 TOM1L1O75674 476 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 IGBP1P78318 339 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 GSDMBQ8TAX9 411 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 HSD3B7Q9H2F3 369 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 PICK1Q9NRD5 415 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 SMYD2Q9NRG4 433 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 KDM6AO15550 1401 aaPredicted RBP19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 TMEM120BA0PK00 339 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 NTSR2O95665 410 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 FGFR2P21802 821 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 ALDH1B1P30837 517 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 GPS1Q13098 491 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 FRMD5Q7Z6J6 570 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 SPATA24Q86W54 205 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 ELMO3Q96BJ8 720 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 AGPAT1Q99943 283 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 PPLO60437 1756 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 A0A1W2PQJ5 194 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 COMTP21964 271 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 BPIFB4P59827 614 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 ZNF543Q08ER8 600 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 ANKMY2Q8IV38 441 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 ZBED8Q8IZ13 594 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 EPS8L3Q8TE67 593 aaKnown RBP19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 NUDCD1Q96RS6 583 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 TTC1Q99614 292 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 ERP44Q9BS26 406 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 OSBPL1AQ9BXW6 950 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 THAP2Q9H0W7 228 aa19.14■□□□□ 0.65
ATPAF1-214ENST00000576409 TAL1P17542 331 aaPredicted RBP19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 YARSP54577 528 aaKnown RBP19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 BARGINQ6ZT62 677 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 TRPM8Q7Z2W7 1104 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 SMC1BQ8NDV3 1235 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 CFAP36Q96G28 342 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 SGSM3Q96HU1 749 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 LXNQ9BS40 222 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 KCND1Q9NSA2 647 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 REXO2Q9Y3B8 237 aaKnown RBP19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 FLT1P17948 1338 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 OVOS2A0A0G2JMS6 1433 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 DKC1O60832 514 aaKnown RBP eCLIP19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 LONP2Q86WA8 852 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 GBP7Q8N8V2 638 aaPredicted RBP19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 RNF34Q969K3 372 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 NARFQ9UHQ1 456 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 SCAF8Q9UPN6 1271 aaKnown RBP19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 MYBL1P10243 752 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 FMO5P49326 533 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 ZNF571Q7Z3V5 609 aaPredicted RBP19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 ATP2A3Q93084 1043 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 C18orf8Q96DM3 657 aa19.13■□□□□ 0.65
ATPAF1-214ENST00000576409 CCT8L1PA6NM43 557 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 INO80B-WBP1J3KQ70 363 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 PDXKO00764 312 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 SBK1Q52WX2 424 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 SPATA21Q7Z572 469 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 TPCN2Q8NHX9 752 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 PAGR1Q9BTK6 254 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 INO80BQ9C086 356 aaPredicted RBP19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 JMJD4Q9H9V9 463 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 NDC80O14777 642 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 COG7P83436 770 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 RBBP5Q15291 538 aaKnown RBP19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 IZUMO3Q5VZ72 239 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 CAPRIN2Q6IMN6 1127 aaKnown RBP19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 PDIK1LQ8N165 341 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 MEGF6O75095 1541 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 LRRC10BA6NIK2 292 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 IPO5O00410 1097 aaKnown RBP19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 DARS2Q6PI48 645 aaKnown RBP19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 KDM7AQ6ZMT4 941 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 SH3RF1Q7Z6J0 888 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 FBXO33Q7Z6M2 555 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 CPA5Q8WXQ8 436 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 ATG4AQ8WYN0 398 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 DNAI2Q9GZS0 605 aa19.12■□□□□ 0.65
ATPAF1-214ENST00000576409 SMYD3Q9H7B4 428 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms