RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 IL17AQ16552 155 aa16.9■□□□□ 0.3
SMG6-220ENST00000576218 ECM1Q16610 540 aa16.9■□□□□ 0.3
SMG6-220ENST00000576218 TIGD5Q53EQ6 642 aa16.9■□□□□ 0.3
SMG6-220ENST00000576218 NOTUMQ6P988 496 aa16.9■□□□□ 0.3
SMG6-220ENST00000576218 SPRYD3Q8NCJ5 442 aa16.9■□□□□ 0.3
SMG6-220ENST00000576218 HELQQ8TDG4 1101 aa16.9■□□□□ 0.3
SMG6-220ENST00000576218 CLP1Q92989 425 aaKnown RBP16.9■□□□□ 0.3
SMG6-220ENST00000576218 PGBD4Q96DM1 585 aa16.9■□□□□ 0.3
SMG6-220ENST00000576218 PLIN2Q99541 437 aa16.9■□□□□ 0.3
SMG6-220ENST00000576218 MRPL9Q9BYD2 267 aaKnown RBP16.9■□□□□ 0.3
SMG6-220ENST00000576218 C2orf40Q9H1Z8 148 aa16.9■□□□□ 0.3
SMG6-220ENST00000576218 MINDY3Q9H8M7 445 aa16.9■□□□□ 0.3
SMG6-220ENST00000576218 FAM105AQ9NUU6 356 aa16.9■□□□□ 0.3
SMG6-220ENST00000576218 THEGQ9P2T0 379 aa16.9■□□□□ 0.3
SMG6-220ENST00000576218 INPP5FQ9Y2H2 1132 aa16.9■□□□□ 0.3
SMG6-220ENST00000576218 COL6A3P12111 3177 aa16.9■□□□□ 0.3
SMG6-220ENST00000576218 NLRC5Q86WI3 1866 aa16.9■□□□□ 0.3
SMG6-220ENST00000576218 RALGAPA2Q2PPJ7 1873 aa16.89■□□□□ 0.29
SMG6-220ENST00000576218 E9PMD0 336 aa16.89■□□□□ 0.29
SMG6-220ENST00000576218 EYA4O95677 639 aa16.89■□□□□ 0.29
SMG6-220ENST00000576218 LAG3P18627 525 aa16.89■□□□□ 0.29
SMG6-220ENST00000576218 POU3F3P20264 500 aaPredicted RBP16.89■□□□□ 0.29
SMG6-220ENST00000576218 RESTQ13127 1097 aa16.89■□□□□ 0.29
SMG6-220ENST00000576218 GLB1LQ6UWU2 654 aa16.89■□□□□ 0.29
SMG6-220ENST00000576218 CABP7Q86V35 215 aa16.89■□□□□ 0.29
SMG6-220ENST00000576218 THNSL1Q8IYQ7 743 aa16.89■□□□□ 0.29
SMG6-220ENST00000576218 CRIPAKQ8N1N5 446 aa16.89■□□□□ 0.29
SMG6-220ENST00000576218 KIFAP3Q92845 792 aa16.89■□□□□ 0.29
SMG6-220ENST00000576218 MRPL38Q96DV4 380 aaKnown RBP16.89■□□□□ 0.29
SMG6-220ENST00000576218 AK8Q96MA6 479 aa16.89■□□□□ 0.29
SMG6-220ENST00000576218 ZSCAN16Q9H4T2 348 aaPredicted RBP16.89■□□□□ 0.29
SMG6-220ENST00000576218 TYW1Q9NV66 732 aaKnown RBP16.89■□□□□ 0.29
SMG6-220ENST00000576218 C5orf67F2Z3F1 127 aa16.88■□□□□ 0.29
SMG6-220ENST00000576218 AXLP30530 894 aa16.88■□□□□ 0.29
SMG6-220ENST00000576218 RNASELQ05823 741 aaKnown RBP16.88■□□□□ 0.29
SMG6-220ENST00000576218 MBTD1Q05BQ5 628 aa16.88■□□□□ 0.29
SMG6-220ENST00000576218 POU5F1BQ06416 359 aa16.88■□□□□ 0.29
SMG6-220ENST00000576218 CSPP1Q1MSJ5 1256 aa16.88■□□□□ 0.29
SMG6-220ENST00000576218 EP400NLQ6ZTU2 488 aa16.88■□□□□ 0.29
SMG6-220ENST00000576218 HACE1Q8IYU2 909 aa16.88■□□□□ 0.29
SMG6-220ENST00000576218 URGCPQ8TCY9 931 aa16.88■□□□□ 0.29
SMG6-220ENST00000576218 LPPQ93052 612 aa16.88■□□□□ 0.29
SMG6-220ENST00000576218 CPB2Q96IY4 423 aa16.88■□□□□ 0.29
SMG6-220ENST00000576218 MTMR6Q9Y217 621 aa16.88■□□□□ 0.29
SMG6-220ENST00000576218 PCDHB2Q9Y5E7 798 aa16.88■□□□□ 0.29
SMG6-220ENST00000576218 PRRC2BQ5JSZ5 2229 aaKnown RBP16.88■□□□□ 0.29
SMG6-220ENST00000576218 CCDC169A6NNP5 214 aa16.87■□□□□ 0.29
SMG6-220ENST00000576218 TSPAN1O60635 241 aa16.87■□□□□ 0.29
SMG6-220ENST00000576218 MARCKSP29966 332 aaPredicted RBP16.87■□□□□ 0.29
SMG6-220ENST00000576218 LONP1P36776 959 aaKnown RBP16.87■□□□□ 0.29
SMG6-220ENST00000576218 TXLNAP40222 546 aa16.87■□□□□ 0.29
SMG6-220ENST00000576218 NAMPTP43490 491 aa16.87■□□□□ 0.29
SMG6-220ENST00000576218 NAALADL2Q58DX5 795 aa16.87■□□□□ 0.29
SMG6-220ENST00000576218 FOXD4L5Q5VV16 416 aaPredicted RBP16.87■□□□□ 0.29
SMG6-220ENST00000576218 KLHL23Q8NBE8 558 aa16.87■□□□□ 0.29
SMG6-220ENST00000576218 FOXD4L4Q8WXT5 416 aaPredicted RBP16.87■□□□□ 0.29
SMG6-220ENST00000576218 P2RX5Q93086 422 aa16.87■□□□□ 0.29
SMG6-220ENST00000576218 PPP2R3CQ969Q6 453 aa16.87■□□□□ 0.29
SMG6-220ENST00000576218 CCDC51Q96ER9 411 aa16.87■□□□□ 0.29
SMG6-220ENST00000576218 DRC1Q96MC2 740 aa16.87■□□□□ 0.29
SMG6-220ENST00000576218 CASD1Q96PB1 797 aa16.87■□□□□ 0.29
SMG6-220ENST00000576218 NFKBIZQ9BYH8 718 aa16.87■□□□□ 0.29
SMG6-220ENST00000576218 LMAN2LQ9H0V9 348 aa16.87■□□□□ 0.29
SMG6-220ENST00000576218 ALG13Q9NP73 1137 aaKnown RBP16.87■□□□□ 0.29
SMG6-220ENST00000576218 PRDM6Q9NQX0 595 aa16.87■□□□□ 0.29
SMG6-220ENST00000576218 PRMT7Q9NVM4 692 aaPredicted RBP16.87■□□□□ 0.29
SMG6-220ENST00000576218 CLIC4Q9Y696 253 aa16.87■□□□□ 0.29
SMG6-220ENST00000576218 GRM6O15303 877 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 ITGA4P13612 1032 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 PDIA4P13667 645 aaKnown RBP16.86■□□□□ 0.29
SMG6-220ENST00000576218 DMP1Q13316 513 aaPredicted RBP16.86■□□□□ 0.29
SMG6-220ENST00000576218 MAPK6Q16659 721 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 CLLU1OSQ5K130 101 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 FAM173BQ6P4H8 233 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 IFNLR1Q8IU57 520 aaPredicted RBP16.86■□□□□ 0.29
SMG6-220ENST00000576218 KCTD17Q8N5Z5 321 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 COLGALT1Q8NBJ5 622 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 CNNM3Q8NE01 707 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 MICAL1Q8TDZ2 1067 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 RSPH1Q8WYR4 309 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 ZNF396Q96N95 335 aaPredicted RBP16.86■□□□□ 0.29
SMG6-220ENST00000576218 ZNF558Q96NG5 402 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 MMTAG2Q9BU76 263 aaKnown RBP16.86■□□□□ 0.29
SMG6-220ENST00000576218 TRAIPQ9BWF2 469 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 APOL6Q9BWW8 343 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 GBP3Q9H0R5 595 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 NSUN3Q9H649 340 aaKnown RBP16.86■□□□□ 0.29
SMG6-220ENST00000576218 RSAD1Q9HA92 442 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 POLD4Q9HCU8 107 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 PLAGL2Q9UPG8 496 aa16.86■□□□□ 0.29
SMG6-220ENST00000576218 SLC26A4O43511 780 aa16.85■□□□□ 0.29
SMG6-220ENST00000576218 HIP1RO75146 1068 aa16.85■□□□□ 0.29
SMG6-220ENST00000576218 ZC3H11AO75152 810 aaKnown RBP eCLIP16.85■□□□□ 0.29
SMG6-220ENST00000576218 ITGB1P05556 798 aa16.85■□□□□ 0.29
SMG6-220ENST00000576218 PRKCBP05771 671 aa16.85■□□□□ 0.29
SMG6-220ENST00000576218 KRT18P05783 430 aaKnown RBP16.85■□□□□ 0.29
SMG6-220ENST00000576218 ATF7P17544 494 aaPredicted RBP16.85■□□□□ 0.29
SMG6-220ENST00000576218 CA8P35219 290 aa16.85■□□□□ 0.29
SMG6-220ENST00000576218 PPM1AP35813 382 aa16.85■□□□□ 0.29
SMG6-220ENST00000576218 RAD51AP2Q09MP3 1159 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms