RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 DMP1Q13316 513 aaPredicted RBP9.46□□□□□ -0.9
NUP88-211ENST00000575976 ODR4Q5SWX8 454 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 KANK3Q6NY19 840 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 CNNM4Q6P4Q7 775 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 SRGAP1Q7Z6B7 1085 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 DEFB128Q7Z7B8 93 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 FAM228AQ86W67 206 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 SFR1Q86XK3 245 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 IFNLR1Q8IU57 520 aaPredicted RBP9.46□□□□□ -0.9
NUP88-211ENST00000575976 CCDC65Q8IXS2 484 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 MYCT1Q8N699 235 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 DEPTORQ8TB45 409 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 GPT2Q8TD30 523 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 SPIRE2Q8WWL2 714 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 FIZ1Q96SL8 496 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 LBHD1Q9BQE6 289 aaPredicted RBP9.46□□□□□ -0.9
NUP88-211ENST00000575976 NTPCRQ9BSD7 190 aaKnown RBP9.46□□□□□ -0.9
NUP88-211ENST00000575976 MINDY3Q9H8M7 445 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 PARVGQ9HBI0 331 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 KMT5AQ9NQR1 393 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 LARSQ9P2J5 1176 aaKnown RBP9.46□□□□□ -0.9
NUP88-211ENST00000575976 SQORQ9Y6N5 450 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 ADGRA3Q8IWK6 1321 aa9.46□□□□□ -0.9
NUP88-211ENST00000575976 PVALEFA0A1B0GWK0 134 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 SLC16A4O15374 487 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 KLRC4O43908 158 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 RPS6KA5O75582 802 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 CXCL10P02778 98 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 GAP43P17677 238 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 RFC2P35250 354 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 MAGEA10P43363 369 aaPredicted RBP9.45□□□□□ -0.9
NUP88-211ENST00000575976 EPHB4P54760 987 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 NCKAP1LP55160 1127 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 FPGSQ05932 587 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 MBTD1Q05BQ5 628 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 DPYDQ12882 1025 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 NFX1Q12986 1120 aaKnown RBP9.45□□□□□ -0.9
NUP88-211ENST00000575976 COASYQ13057 564 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 PPIGQ13427 754 aaKnown RBP eCLIP9.45□□□□□ -0.9
NUP88-211ENST00000575976 PNOCQ13519 176 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 POSTNQ15063 836 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 TCTN1Q2MV58 587 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 PLEKHG4Q58EX7 1191 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 HERC4Q5GLZ8 1057 aaPredicted RBP9.45□□□□□ -0.9
NUP88-211ENST00000575976 CDCA2Q69YH5 1023 aaPredicted RBP9.45□□□□□ -0.9
NUP88-211ENST00000575976 TSHZ1Q6ZSZ6 1077 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 UNC13DQ70J99 1090 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 C16orf59Q7L2K0 433 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 ZBTB8OSQ8IWT0 167 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 RPUSD2Q8IZ73 545 aaKnown RBP9.45□□□□□ -0.9
NUP88-211ENST00000575976 TDHQ8IZJ6 230 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 USP38Q8NB14 1042 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 DBF4BQ8NFT6 615 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 ERCC4Q92889 916 aaPredicted RBP9.45□□□□□ -0.9
NUP88-211ENST00000575976 HPS3Q969F9 1004 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 CCDC34Q96HJ3 373 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 GDF15Q99988 308 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 NFKBIZQ9BYH8 718 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 INO80BQ9C086 356 aaPredicted RBP9.45□□□□□ -0.9
NUP88-211ENST00000575976 C2orf40Q9H1Z8 148 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 ERVK-5Q9HDB9 667 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 IL23AQ9NPF7 189 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 TBC1D7Q9P0N9 293 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 PADI3Q9ULW8 664 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 ST3GAL5Q9UNP4 418 aa9.45□□□□□ -0.9
NUP88-211ENST00000575976 SPTBN5Q9NRC6 3674 aaKnown RBP9.44□□□□□ -0.9
NUP88-211ENST00000575976 INO80B-WBP1J3KQ70 363 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 GPR182O15218 404 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 RPN1P04843 607 aaKnown RBP9.44□□□□□ -0.9
NUP88-211ENST00000575976 EDN1P05305 212 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 MYL1P05976 194 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 MAPTP10636 758 aaKnown RBP9.44□□□□□ -0.9
NUP88-211ENST00000575976 NMT1P30419 496 aaKnown RBP9.44□□□□□ -0.9
NUP88-211ENST00000575976 SMTNP53814 917 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 EHHADHQ08426 723 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 PAK2Q13177 524 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 CAMK4Q16566 473 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 AMHR2Q16671 573 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 KMT5BQ4FZB7 885 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 Q7L0L9 218 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 TAS1R3Q7RTX0 852 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 HAUS6Q7Z4H7 955 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 FAM178BQ8IXR5 827 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 ELOA2Q8IYF1 753 aaPredicted RBP9.44□□□□□ -0.9
NUP88-211ENST00000575976 TMEM161BQ8NDZ6 487 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 SEPT8Q92599 483 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 IFIH1Q9BYX4 1025 aaKnown RBP9.44□□□□□ -0.9
NUP88-211ENST00000575976 CCDC113Q9H0I3 377 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 TMX1Q9H3N1 280 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 FZD8Q9H461 694 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 TMEM134Q9H6X4 195 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 ARHGAP28Q9P2N2 729 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 SEL1LQ9UBV2 794 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 KCNG1Q9UIX4 513 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 USP20Q9Y2K6 914 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 DNAH12Q6ZR08 3092 aa9.44□□□□□ -0.9
NUP88-211ENST00000575976 SCN5AQ14524 2016 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 TANC1Q9C0D5 1861 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 SIP14410 1827 aa9.43□□□□□ -0.9
NUP88-211ENST00000575976 LTBP2Q14767 1821 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms