RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 TWF2Q6IBS0 349 aaKnown RBP15.04■□□□□ -0
CIITA-210ENST00000575513 CABP7Q86V35 215 aa15.04■□□□□ -0
CIITA-210ENST00000575513 SYT2Q8N9I0 419 aaPredicted RBP15.04■□□□□ -0
CIITA-210ENST00000575513 FBXO22Q8NEZ5 403 aa15.04■□□□□ -0
CIITA-210ENST00000575513 PRIMPOLQ96LW4 560 aa15.04■□□□□ -0
CIITA-210ENST00000575513 ZNF396Q96N95 335 aaPredicted RBP15.04■□□□□ -0
CIITA-210ENST00000575513 PNMA5Q96PV4 448 aa15.04■□□□□ -0
CIITA-210ENST00000575513 C17orf80Q9BSJ5 609 aa15.04■□□□□ -0
CIITA-210ENST00000575513 CCSER1Q9C0I3 900 aa15.04■□□□□ -0
CIITA-210ENST00000575513 TMEM117Q9H0C3 514 aa15.04■□□□□ -0
CIITA-210ENST00000575513 C2orf40Q9H1Z8 148 aa15.04■□□□□ -0
CIITA-210ENST00000575513 C17orf75Q9HAS0 396 aa15.04■□□□□ -0
CIITA-210ENST00000575513 GPRC5CQ9NQ84 441 aa15.04■□□□□ -0
CIITA-210ENST00000575513 MYO9BQ13459 2157 aa15.04■□□□□ -0
CIITA-210ENST00000575513 INO80B-WBP1J3KQ70 363 aa15.03■□□□□ -0
CIITA-210ENST00000575513 IGFBP4P22692 258 aa15.03■□□□□ -0
CIITA-210ENST00000575513 GUCY2CP25092 1073 aa15.03■□□□□ -0
CIITA-210ENST00000575513 EFNA5P52803 228 aa15.03■□□□□ -0
CIITA-210ENST00000575513 RINT1Q6NUQ1 792 aa15.03■□□□□ -0
CIITA-210ENST00000575513 FAM173BQ6P4H8 233 aa15.03■□□□□ -0
CIITA-210ENST00000575513 NOTUMQ6P988 496 aa15.03■□□□□ -0
CIITA-210ENST00000575513 PPP4R3CPQ6ZMV5 832 aa15.03■□□□□ -0
CIITA-210ENST00000575513 C1orf186Q6ZWK4 172 aa15.03■□□□□ -0
CIITA-210ENST00000575513 MAEAQ7L5Y9 396 aa15.03■□□□□ -0
CIITA-210ENST00000575513 KCNK18Q7Z418 384 aa15.03■□□□□ -0
CIITA-210ENST00000575513 SPRED2Q7Z698 418 aa15.03■□□□□ -0
CIITA-210ENST00000575513 MRPL10Q7Z7H8 261 aaKnown RBP15.03■□□□□ -0
CIITA-210ENST00000575513 CNNM3Q8NE01 707 aa15.03■□□□□ -0
CIITA-210ENST00000575513 P2RX5Q93086 422 aa15.03■□□□□ -0
CIITA-210ENST00000575513 IFT74Q96LB3 600 aa15.03■□□□□ -0
CIITA-210ENST00000575513 USP28Q96RU2 1077 aa15.03■□□□□ -0
CIITA-210ENST00000575513 C11orf84Q9BUA3 381 aaPredicted RBP15.03■□□□□ -0
CIITA-210ENST00000575513 FZD8Q9H461 694 aa15.03■□□□□ -0
CIITA-210ENST00000575513 FAM105AQ9NUU6 356 aa15.03■□□□□ -0
CIITA-210ENST00000575513 FBXO2Q9UK22 296 aaPredicted RBP15.03■□□□□ -0
CIITA-210ENST00000575513 MTCH2Q9Y6C9 303 aa15.03■□□□□ -0
CIITA-210ENST00000575513 TRANK1O15050 2925 aa15.03■□□□□ -0
CIITA-210ENST00000575513 PHLPP2Q6ZVD8 1323 aa15.02■□□□□ -0
CIITA-210ENST00000575513 LRRIQ4A6NIV6 560 aa15.02■□□□□ -0
CIITA-210ENST00000575513 RFXAPO00287 272 aa15.02■□□□□ -0
CIITA-210ENST00000575513 TSPAN1O60635 241 aa15.02■□□□□ -0
CIITA-210ENST00000575513 ATF7P17544 494 aaPredicted RBP15.02■□□□□ -0
CIITA-210ENST00000575513 SLC12A3P55017 1021 aa15.02■□□□□ -0
CIITA-210ENST00000575513 ZRSR1Q15695 479 aaKnown RBP15.02■□□□□ -0
CIITA-210ENST00000575513 AMHR2Q16671 573 aa15.02■□□□□ -0
CIITA-210ENST00000575513 ZBTB8OSQ8IWT0 167 aa15.02■□□□□ -0
CIITA-210ENST00000575513 PGBD4Q96DM1 585 aa15.02■□□□□ -0
CIITA-210ENST00000575513 DRC1Q96MC2 740 aa15.02■□□□□ -0
CIITA-210ENST00000575513 CASD1Q96PB1 797 aa15.02■□□□□ -0
CIITA-210ENST00000575513 AAASQ9NRG9 546 aa15.02■□□□□ -0
CIITA-210ENST00000575513 RNF19AQ9NV58 838 aa15.02■□□□□ -0
CIITA-210ENST00000575513 PRMT7Q9NVM4 692 aaPredicted RBP15.02■□□□□ -0
CIITA-210ENST00000575513 MTUS1Q9ULD2 1270 aa15.02■□□□□ -0
CIITA-210ENST00000575513 PCDHB2Q9Y5E7 798 aa15.02■□□□□ -0
CIITA-210ENST00000575513 MRPL42Q9Y6G3 142 aaKnown RBP15.02■□□□□ -0
CIITA-210ENST00000575513 ARID2Q68CP9 1835 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 A0A1B0GUA9 196 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 CARNS1A5YM72 827 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 TBKBP1A7MCY6 615 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 PPP6R2O75170 966 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 F13A1P00488 732 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 PLA2G4BP0C869 781 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 FGFR1P11362 822 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 MARCKSP29966 332 aaPredicted RBP15.01□□□□□ -0.01
CIITA-210ENST00000575513 GRIN1Q05586 938 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 GPM6BQ13491 265 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 PTPROQ16827 1216 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 CSPP1Q1MSJ5 1256 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 ABI1Q8IZP0 508 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 KRI1Q8N9T8 703 aaKnown RBP15.01□□□□□ -0.01
CIITA-210ENST00000575513 SPRYD3Q8NCJ5 442 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 LINC00301Q8NCQ3 95 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 BSNDQ8WZ55 320 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 NTPCRQ9BSD7 190 aaKnown RBP15.01□□□□□ -0.01
CIITA-210ENST00000575513 RUSC1Q9BVN2 902 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 MRPL9Q9BYD2 267 aaKnown RBP15.01□□□□□ -0.01
CIITA-210ENST00000575513 LMAN2LQ9H0V9 348 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 CSRNP2Q9H175 543 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 UBN1Q9NPG3 1134 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 CCDC39Q9UFE4 941 aa15.01□□□□□ -0.01
CIITA-210ENST00000575513 RBM19Q9Y4C8 960 aaKnown RBP15.01□□□□□ -0.01
CIITA-210ENST00000575513 CNTNAP2Q9UHC6 1331 aa15□□□□□ -0.01
CIITA-210ENST00000575513 ACKR2O00590 384 aa15□□□□□ -0.01
CIITA-210ENST00000575513 YEATS4O95619 227 aa15□□□□□ -0.01
CIITA-210ENST00000575513 NCLP19338 710 aaKnown RBP15□□□□□ -0.01
CIITA-210ENST00000575513 CTNNB1P35222 781 aa15□□□□□ -0.01
CIITA-210ENST00000575513 DDIT3P35638 169 aa15□□□□□ -0.01
CIITA-210ENST00000575513 GATMP50440 423 aa15□□□□□ -0.01
CIITA-210ENST00000575513 CEBPZQ03701 1054 aaKnown RBP15□□□□□ -0.01
CIITA-210ENST00000575513 MAPK6Q16659 721 aa15□□□□□ -0.01
CIITA-210ENST00000575513 PAN2Q504Q3 1202 aaKnown RBP15□□□□□ -0.01
CIITA-210ENST00000575513 CLLU1OSQ5K130 101 aa15□□□□□ -0.01
CIITA-210ENST00000575513 UBXN11Q5T124 520 aa15□□□□□ -0.01
CIITA-210ENST00000575513 DAW1Q8N136 415 aa15□□□□□ -0.01
CIITA-210ENST00000575513 LRRC43Q8N309 656 aa15□□□□□ -0.01
CIITA-210ENST00000575513 DEPTORQ8TB45 409 aa15□□□□□ -0.01
CIITA-210ENST00000575513 MRPL38Q96DV4 380 aaKnown RBP15□□□□□ -0.01
CIITA-210ENST00000575513 CCDC113Q9H0I3 377 aa15□□□□□ -0.01
CIITA-210ENST00000575513 TYW1Q9NV66 732 aaKnown RBP15□□□□□ -0.01
CIITA-210ENST00000575513 PCDHB12Q9Y5F1 795 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms