RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 KCNA1Q09470 495 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 IKQ13123 557 aaPredicted RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 MEX3CQ5U5Q3 659 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 METTL21CQ5VZV1 264 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 SNRNP48Q6IEG0 339 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 THSD4Q6ZMP0 1018 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 ACAD11Q709F0 780 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 LRRC34Q8IZ02 419 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 KIF2BQ8N4N8 673 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 FAM13CQ8NE31 585 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 TBC1D16Q8TBP0 767 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 MAGOHBQ96A72 148 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 C8orf48Q96LL4 319 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 PCMTD1Q96MG8 357 aaPredicted RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 CENPOQ9BU64 300 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 ISCUQ9H1K1 167 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 ETNK1Q9HBU6 452 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 VTA1Q9NP79 307 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 STK39Q9UEW8 545 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 CNOT8Q9UFF9 292 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 TSR3Q9UJK0 312 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 ANGPTL2Q9UKU9 493 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 FAF1Q9UNN5 650 aaPredicted RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 NOVA2Q9UNW9 492 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 NOX1Q9Y5S8 564 aa8.54□□□□□ -1.04
TOM1L1-220ENST00000575333 LTBP4Q8N2S1 1624 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 PTPRUQ92729 1446 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 PABPN1LA6NDY0 278 aaKnown RBP8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 HOXA2O43364 376 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 PPP6R2O75170 966 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 BAIAP3O94812 1187 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 FARP2O94887 1054 aaPredicted RBP8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 RXRAP19793 462 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 RASA1P20936 1047 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 PPARGP37231 505 aaPredicted RBP8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 CARSP49589 748 aaKnown RBP8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 APLP1P51693 650 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 KIF11P52732 1056 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 TNNC1P63316 161 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 MAP3K10Q02779 954 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 GRM2Q14416 872 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 LPIN1Q14693 890 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 SPATA1Q5VX52 437 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 RESP18Q5W5W9 173 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 SIGIRRQ6IA17 410 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 TUBA3EQ6PEY2 450 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 BORAQ6PGQ7 559 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 DHRS4L2Q6PKH6 230 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 LVRNQ6Q4G3 990 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 DTHD1Q6ZMT9 781 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 HS2ST1Q7LGA3 356 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 RIC3Q7Z5B4 369 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 FAM20CQ8IXL6 584 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 CYP4X1Q8N118 509 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 DCLK2Q8N568 766 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 ENAHQ8N8S7 591 aaPredicted RBP8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 TOR1AIP2Q8NFQ8 470 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 OR7G1Q8NGA0 311 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 PI4K2BQ8TCG2 481 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 MAP4K1Q92918 833 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 SDCCAG3Q96C92 435 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 SGF29Q96ES7 293 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 PGM2Q96G03 612 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 MEIS3Q99687 375 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 ANKRD2Q9GZV1 360 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 C12orf10Q9HB07 376 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 EPB41L5Q9HCM4 733 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 TYW1Q9NV66 732 aaKnown RBP8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 GIN1Q9NXP7 522 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 PLK2Q9NYY3 685 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 UVRAGQ9P2Y5 699 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 DNAJB4Q9UDY4 337 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 DMTF1Q9Y222 760 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 STXBP5LQ9Y2K9 1186 aa8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 NOSIPQ9Y314 301 aaKnown RBP8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 RBM8AQ9Y5S9 174 aaKnown RBP8.53□□□□□ -1.04
TOM1L1-220ENST00000575333 LOC105371267A0A1B0GV96 52 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 NOTOA8MTQ0 251 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 ERVV-2B6SEH9 535 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 JAK2O60674 1132 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 AFPP02771 609 aaKnown RBP8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 SLC16A2P36021 539 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 KRT6CP48668 564 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 PCYT1AP49585 367 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 THOP1P52888 689 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 PFKPQ01813 784 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 HLTFQ14527 1009 aaKnown RBP eCLIP8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 EZH2Q15910 746 aaKnown RBP8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 CTC1Q2NKJ3 1217 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 MYLK3Q32MK0 819 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 BEND3Q5T5X7 828 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 CDKAL1Q5VV42 579 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 PPP2R2DQ66LE6 453 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 RSBN1LQ6PCB5 846 aaPredicted RBP8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 C1orf228Q6PIY5 440 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 APTXQ7Z2E3 356 aaKnown RBP8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 PROSER2Q86WR7 435 aaPredicted RBP8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 PALB2Q86YC2 1186 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 ARHGAP24Q8N264 748 aa8.52□□□□□ -1.04
TOM1L1-220ENST00000575333 TSPYL6Q8N831 410 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms