RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 LAMA3Q16787 3333 aa17.96■□□□□ 0.47
PFN1-203ENST00000574872 FAM237AA0A1B0GTK4 181 aa17.96■□□□□ 0.47
PFN1-203ENST00000574872 DENND3A2RUS2 1198 aa17.96■□□□□ 0.47
PFN1-203ENST00000574872 SLC16A4O15374 487 aa17.96■□□□□ 0.47
PFN1-203ENST00000574872 ACTN4O43707 911 aaKnown RBP17.96■□□□□ 0.47
PFN1-203ENST00000574872 PLS3P13797 630 aa17.96■□□□□ 0.47
PFN1-203ENST00000574872 AFMP43652 599 aa17.96■□□□□ 0.47
PFN1-203ENST00000574872 LONRF3Q496Y0 759 aa17.96■□□□□ 0.47
PFN1-203ENST00000574872 CDCA2Q69YH5 1023 aaPredicted RBP17.96■□□□□ 0.47
PFN1-203ENST00000574872 FAM109BQ6ICB4 259 aaPredicted RBP17.96■□□□□ 0.47
PFN1-203ENST00000574872 MYOCDQ8IZQ8 938 aa17.96■□□□□ 0.47
PFN1-203ENST00000574872 MYCT1Q8N699 235 aa17.96■□□□□ 0.47
PFN1-203ENST00000574872 ADAM2Q99965 735 aa17.96■□□□□ 0.47
PFN1-203ENST00000574872 PYM1Q9BRP8 204 aaKnown RBP17.96■□□□□ 0.47
PFN1-203ENST00000574872 FTHL17Q9BXU8 183 aa17.96■□□□□ 0.47
PFN1-203ENST00000574872 TNMDQ9H2S6 317 aa17.96■□□□□ 0.47
PFN1-203ENST00000574872 KMT5AQ9NQR1 393 aa17.96■□□□□ 0.47
PFN1-203ENST00000574872 KBTBD4Q9NVX7 518 aa17.96■□□□□ 0.47
PFN1-203ENST00000574872 PIN4Q9Y237 131 aaKnown RBP17.96■□□□□ 0.47
PFN1-203ENST00000574872 MICAL3Q7RTP6 2002 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.95■□□□□ 0.46
PFN1-203ENST00000574872 GRXCR1A8MXD5 290 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 ENPP3O14638 875 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 EFCAB14O75071 495 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 ERLIN2O94905 339 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 IDEP14735 1019 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 CASP1P29466 404 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 POU5F1BQ06416 359 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 FAM117BQ6P1L5 589 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 RTN4RL1Q86UN2 441 aaPredicted RBP17.95■□□□□ 0.46
PFN1-203ENST00000574872 IFNLR1Q8IU57 520 aaPredicted RBP17.95■□□□□ 0.46
PFN1-203ENST00000574872 TMEM87AQ8NBN3 555 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 DNAJC19Q96DA6 116 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 NFKBIZQ9BYH8 718 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 C2orf40Q9H1Z8 148 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 BLZF1Q9H2G9 400 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 MAGEF1Q9HAY2 307 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 PARVGQ9HBI0 331 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 USP20Q9Y2K6 914 aa17.95■□□□□ 0.46
PFN1-203ENST00000574872 B4GALT5O43286 388 aa17.94■□□□□ 0.46
PFN1-203ENST00000574872 TSPAN1O60635 241 aa17.94■□□□□ 0.46
PFN1-203ENST00000574872 AMHP03971 560 aa17.94■□□□□ 0.46
PFN1-203ENST00000574872 SLFN14P0C7P3 912 aa17.94■□□□□ 0.46
PFN1-203ENST00000574872 ATP2A2P16615 1042 aaKnown RBP17.94■□□□□ 0.46
PFN1-203ENST00000574872 ZSCAN20P17040 1043 aaPredicted RBP17.94■□□□□ 0.46
PFN1-203ENST00000574872 ZNF131P52739 623 aa17.94■□□□□ 0.46
PFN1-203ENST00000574872 ASIC1P78348 528 aa17.94■□□□□ 0.46
PFN1-203ENST00000574872 CPB2Q96IY4 423 aa17.94■□□□□ 0.46
PFN1-203ENST00000574872 TRIM9Q9C026 710 aa17.94■□□□□ 0.46
PFN1-203ENST00000574872 TSPYL2Q9H2G4 693 aaPredicted RBP17.94■□□□□ 0.46
PFN1-203ENST00000574872 C17orf75Q9HAS0 396 aa17.94■□□□□ 0.46
PFN1-203ENST00000574872 AGPAT5Q9NUQ2 364 aa17.94■□□□□ 0.46
PFN1-203ENST00000574872 LARSQ9P2J5 1176 aaKnown RBP17.94■□□□□ 0.46
PFN1-203ENST00000574872 LAMA2P24043 3122 aaKnown RBP17.94■□□□□ 0.46
PFN1-203ENST00000574872 MYH11P35749 1972 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 A0A1W2PPC1 479 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 PRPF40AO75400 957 aaKnown RBP17.93■□□□□ 0.46
PFN1-203ENST00000574872 UPP2O95045 317 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 ZNF202O95125 648 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 PRKCBP05771 671 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 SMTNP53814 917 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 AMPD3Q01432 767 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 DSC3Q14574 896 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 AMHR2Q16671 573 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 TWF2Q6IBS0 349 aaKnown RBP17.93■□□□□ 0.46
PFN1-203ENST00000574872 SFR1Q86XK3 245 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 CNNM3Q8NE01 707 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 SPIRE2Q8WWL2 714 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 PAGE5Q96GU1 130 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 SLC9A7Q96T83 725 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 LRRC27Q9C0I9 530 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 CCDC113Q9H0I3 377 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 TBC1D7Q9P0N9 293 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 ARHGAP28Q9P2N2 729 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 USP25Q9UHP3 1055 aa17.93■□□□□ 0.46
PFN1-203ENST00000574872 TTLL13PA6NNM8 815 aa17.92■□□□□ 0.46
PFN1-203ENST00000574872 K7ENM7 598 aa17.92■□□□□ 0.46
PFN1-203ENST00000574872 TRAK2O60296 914 aa17.92■□□□□ 0.46
PFN1-203ENST00000574872 EDN1P05305 212 aa17.92■□□□□ 0.46
PFN1-203ENST00000574872 HOXA11P31270 313 aaPredicted RBP17.92■□□□□ 0.46
PFN1-203ENST00000574872 EFNA5P52803 228 aa17.92■□□□□ 0.46
PFN1-203ENST00000574872 RABGGTBP53611 331 aa17.92■□□□□ 0.46
PFN1-203ENST00000574872 CUL4BQ13620 913 aa17.92■□□□□ 0.46
PFN1-203ENST00000574872 MAPK6Q16659 721 aa17.92■□□□□ 0.46
PFN1-203ENST00000574872 TMEM132AQ24JP5 1023 aa17.92■□□□□ 0.46
PFN1-203ENST00000574872 KRBA2Q6ZNG9 492 aa17.92■□□□□ 0.46
PFN1-203ENST00000574872 CDR2LQ86X02 465 aaPredicted RBP17.92■□□□□ 0.46
PFN1-203ENST00000574872 FAM178BQ8IXR5 827 aa17.92■□□□□ 0.46
PFN1-203ENST00000574872 FMR1NBQ8N0W7 255 aaPredicted RBP17.92■□□□□ 0.46
PFN1-203ENST00000574872 FZD8Q9H461 694 aa17.92■□□□□ 0.46
PFN1-203ENST00000574872 RGS18Q9NS28 235 aa17.92■□□□□ 0.46
PFN1-203ENST00000574872 PANK4Q9NVE7 773 aa17.92■□□□□ 0.46
PFN1-203ENST00000574872 PRMT7Q9NVM4 692 aaPredicted RBP17.92■□□□□ 0.46
PFN1-203ENST00000574872 PHLPP2Q6ZVD8 1323 aa17.92■□□□□ 0.46
PFN1-203ENST00000574872 K7ERI5 159 aa17.91■□□□□ 0.46
PFN1-203ENST00000574872 ARF4P18085 180 aaPredicted RBP17.91■□□□□ 0.46
PFN1-203ENST00000574872 NMT1P30419 496 aaKnown RBP17.91■□□□□ 0.46
PFN1-203ENST00000574872 NCKAP1LP55160 1127 aa17.91■□□□□ 0.46
PFN1-203ENST00000574872 FAM160A1Q05DH4 1040 aa17.91■□□□□ 0.46
PFN1-203ENST00000574872 NCBP1Q09161 790 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms