RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 SMIM35A0A1B0GVV1 85 aa23.3■■□□□ 1.32
CXCL16-203ENST00000574412 EIF3DO15371 548 aaKnown RBP eCLIP23.3■■□□□ 1.32
CXCL16-203ENST00000574412 PPP1R37O75864 691 aa23.3■■□□□ 1.32
CXCL16-203ENST00000574412 MAPTP10636 758 aaKnown RBP23.3■■□□□ 1.32
CXCL16-203ENST00000574412 ZNF18P17022 549 aa23.3■■□□□ 1.32
CXCL16-203ENST00000574412 PTGISQ16647 500 aa23.3■■□□□ 1.32
CXCL16-203ENST00000574412 SESTD1Q86VW0 696 aa23.3■■□□□ 1.32
CXCL16-203ENST00000574412 ZNF507Q8TCN5 953 aa23.3■■□□□ 1.32
CXCL16-203ENST00000574412 P2RX5Q93086 422 aa23.3■■□□□ 1.32
CXCL16-203ENST00000574412 WNT8BQ93098 351 aa23.3■■□□□ 1.32
CXCL16-203ENST00000574412 EEF2KMTQ96G04 330 aa23.3■■□□□ 1.32
CXCL16-203ENST00000574412 STRA6Q9BX79 667 aa23.3■■□□□ 1.32
CXCL16-203ENST00000574412 SAMSN1Q9NSI8 373 aaKnown RBP23.3■■□□□ 1.32
CXCL16-203ENST00000574412 ARHGAP28Q9P2N2 729 aa23.3■■□□□ 1.32
CXCL16-203ENST00000574412 USP20Q9Y2K6 914 aa23.3■■□□□ 1.32
CXCL16-203ENST00000574412 A0A087WZ62 844 aa23.29■■□□□ 1.32
CXCL16-203ENST00000574412 A0A0U1RQG5 324 aaPredicted RBP23.29■■□□□ 1.32
CXCL16-203ENST00000574412 NLRP11P59045 1033 aaKnown RBP23.29■■□□□ 1.32
CXCL16-203ENST00000574412 KIZQ2M2Z5 673 aa23.29■■□□□ 1.32
CXCL16-203ENST00000574412 ANKRD40Q6AI12 368 aa23.29■■□□□ 1.32
CXCL16-203ENST00000574412 STXBP4Q6ZWJ1 553 aa23.29■■□□□ 1.32
CXCL16-203ENST00000574412 DIS3LQ8TF46 1054 aaKnown RBP23.29■■□□□ 1.32
CXCL16-203ENST00000574412 NLRP7Q8WX94 980 aa23.29■■□□□ 1.32
CXCL16-203ENST00000574412 CTAGE1Q96RT6 745 aa23.29■■□□□ 1.32
CXCL16-203ENST00000574412 FDXACB1Q9BRP7 624 aaPredicted RBP23.29■■□□□ 1.32
CXCL16-203ENST00000574412 SENP6Q9GZR1 1112 aaPredicted RBP23.29■■□□□ 1.32
CXCL16-203ENST00000574412 ZMYM2Q9UBW7 1377 aa23.29■■□□□ 1.32
CXCL16-203ENST00000574412 CSDE1O75534 798 aaKnown RBP23.28■■□□□ 1.32
CXCL16-203ENST00000574412 CCNE1P24864 410 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 MNX1P50219 401 aaPredicted RBP23.28■■□□□ 1.32
CXCL16-203ENST00000574412 GTF2BQ00403 316 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 FANCCQ00597 558 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 TFDP1Q14186 410 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 KNOP1Q1ED39 458 aaKnown RBP23.28■■□□□ 1.32
CXCL16-203ENST00000574412 HSP90AA4PQ58FG1 418 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 TAS1R3Q7RTX0 852 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 TRPV6Q9H1D0 765 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 KCTD10Q9H3F6 313 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 TBX20Q9UMR3 447 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 NOD1Q9Y239 953 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 GJA8P48165 433 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 GPC3P51654 580 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 ATN1P54259 1190 aaPredicted RBP23.28■■□□□ 1.32
CXCL16-203ENST00000574412 BMT2Q1RMZ1 405 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 CENPPQ6IPU0 288 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 SYCP3Q8IZU3 236 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 ST6GALNAC4Q9H4F1 302 aa23.28■■□□□ 1.32
CXCL16-203ENST00000574412 TISP43B9A030 160 aa23.27■■□□□ 1.32
CXCL16-203ENST00000574412 ASAP2O43150 1006 aa23.27■■□□□ 1.32
CXCL16-203ENST00000574412 KIF20AO95235 890 aa23.27■■□□□ 1.32
CXCL16-203ENST00000574412 TPD52L1Q16890 204 aaPredicted RBP23.27■■□□□ 1.32
CXCL16-203ENST00000574412 SLC17A8Q8NDX2 589 aa23.27■■□□□ 1.32
CXCL16-203ENST00000574412 MRFAP1L1Q96HT8 127 aa23.27■■□□□ 1.32
CXCL16-203ENST00000574412 ACCSQ96QU6 501 aa23.27■■□□□ 1.32
CXCL16-203ENST00000574412 MINDY3Q9H8M7 445 aa23.27■■□□□ 1.32
CXCL16-203ENST00000574412 CDHR5Q9HBB8 845 aa23.27■■□□□ 1.32
CXCL16-203ENST00000574412 UBE4BO95155 1302 aa23.26■■□□□ 1.31
CXCL16-203ENST00000574412 K7ERI5 159 aa23.26■■□□□ 1.31
CXCL16-203ENST00000574412 ARVCFO00192 962 aa23.26■■□□□ 1.31
CXCL16-203ENST00000574412 ALCAMQ13740 583 aa23.26■■□□□ 1.31
CXCL16-203ENST00000574412 CDKAL1Q5VV42 579 aa23.26■■□□□ 1.31
CXCL16-203ENST00000574412 TTI2Q6NXR4 508 aa23.26■■□□□ 1.31
CXCL16-203ENST00000574412 SERINC5Q86VE9 423 aa23.26■■□□□ 1.31
CXCL16-203ENST00000574412 ZBTB8OSQ8IWT0 167 aa23.26■■□□□ 1.31
CXCL16-203ENST00000574412 TMEM106CQ9BVX2 250 aa23.26■■□□□ 1.31
CXCL16-203ENST00000574412 IFT122Q9HBG6 1241 aa23.26■■□□□ 1.31
CXCL16-203ENST00000574412 IFNKQ9P0W0 207 aa23.26■■□□□ 1.31
CXCL16-203ENST00000574412 INO80B-WBP1J3KQ70 363 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 B4GALT4O60513 344 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 EDN1P05305 212 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 CTSHP09668 335 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 CDC25BP30305 580 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 PHKA2P46019 1235 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 CDCA2Q69YH5 1023 aaPredicted RBP23.25■■□□□ 1.31
CXCL16-203ENST00000574412 TAF2Q6P1X5 1199 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.25■■□□□ 1.31
CXCL16-203ENST00000574412 SLC43A3Q8NBI5 491 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 OSMRQ99650 979 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 DUSP9Q99956 384 aaKnown RBP23.25■■□□□ 1.31
CXCL16-203ENST00000574412 INO80BQ9C086 356 aaPredicted RBP23.25■■□□□ 1.31
CXCL16-203ENST00000574412 KCNG1Q9UIX4 513 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 BICDL2A1A5D9 508 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 H0YCG3 227 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 CLIC2O15247 247 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 TGFB1I1O43294 461 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 GPR32O75388 356 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 CDK11BP21127 795 aaKnown RBP23.25■■□□□ 1.31
CXCL16-203ENST00000574412 PTENP60484 403 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 PTPN11Q06124 597 aaPredicted RBP23.25■■□□□ 1.31
CXCL16-203ENST00000574412 ZCWPW2Q504Y3 356 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 MAP4K3Q8IVH8 894 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 BICD1Q96G01 975 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 TSG101Q99816 390 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 XPO4Q9C0E2 1151 aaKnown RBP23.25■■□□□ 1.31
CXCL16-203ENST00000574412 ADAMTS10Q9H324 1103 aa23.25■■□□□ 1.31
CXCL16-203ENST00000574412 PHLPP2Q6ZVD8 1323 aa23.24■■□□□ 1.31
CXCL16-203ENST00000574412 TTLL13PA6NNM8 815 aa23.24■■□□□ 1.31
CXCL16-203ENST00000574412 SERPINC1P01008 464 aa23.24■■□□□ 1.31
CXCL16-203ENST00000574412 STRN3Q13033 797 aa23.24■■□□□ 1.31
CXCL16-203ENST00000574412 GBP3Q9H0R5 595 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms