RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 MTERF2Q49AM1 385 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 PSMB7Q99436 277 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 HINFPQ9BQA5 517 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 TBX20Q9UMR3 447 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 SNX12Q9UMY4 172 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 EXOC7Q9UPT5 735 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 PFASO15067 1338 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 PTPRFP10586 1907 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 NCK2O43639 380 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 SUPT20HL2P0C7V6 817 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 FERP16591 822 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 NF2P35240 595 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 GCLMP48507 274 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 ALDH5A1P51649 535 aaPredicted RBP11.38□□□□□ -0.59
USP43-205ENST00000574408 DRAP1Q14919 205 aaPredicted RBP11.38□□□□□ -0.59
USP43-205ENST00000574408 ERO1BQ86YB8 467 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 RNF10Q8N5U6 811 aaKnown RBP11.38□□□□□ -0.59
USP43-205ENST00000574408 ZNF526Q8TF50 670 aaPredicted RBP11.38□□□□□ -0.59
USP43-205ENST00000574408 CDCA5Q96FF9 252 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 PNKPQ96T60 521 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 RABEP2Q9H5N1 569 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 CYP26B1Q9NR63 512 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 A0A0G2JLL6 359 aaPredicted RBP11.38□□□□□ -0.59
USP43-205ENST00000574408 ANKRD63C9JTQ0 380 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 EVI5O60447 810 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 DGAT1O75907 488 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 TUBB4BP68371 445 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 PPATQ06203 517 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 PPP3CAQ08209 521 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 NAB2Q15742 525 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 ARHGAP44Q17R89 818 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 CC2D1AQ6P1N0 951 aaPredicted RBP11.38□□□□□ -0.59
USP43-205ENST00000574408 PRRT2Q7Z6L0 340 aaPredicted RBP11.38□□□□□ -0.59
USP43-205ENST00000574408 VPS36Q86VN1 386 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 DNAAF5Q86Y56 855 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 ANKRD13AQ8IZ07 590 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 MCPH1Q8NEM0 835 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 MAF1Q9H063 256 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 ASCC2Q9H1I8 757 aaPredicted RBP11.38□□□□□ -0.59
USP43-205ENST00000574408 XPNPEP1Q9NQW7 623 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 APEX2Q9UBZ4 518 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 F8VZ95 297 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 PDE2AO00408 941 aaPredicted RBP11.38□□□□□ -0.59
USP43-205ENST00000574408 SOX5P35711 763 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 LMAN1P49257 510 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 NFRKBQ6P4R8 1299 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 ALKBH5Q6P6C2 394 aaKnown RBP11.38□□□□□ -0.59
USP43-205ENST00000574408 MAP4K3Q8IVH8 894 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 PROCA1Q8NCQ7 364 aaPredicted RBP11.38□□□□□ -0.59
USP43-205ENST00000574408 MSANTD4Q8NCY6 345 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 SAAL1Q96ER3 474 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 STK33Q9BYT3 514 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 ATP6V0A4Q9HBG4 840 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 NAGPAQ9UK23 515 aa11.38□□□□□ -0.59
USP43-205ENST00000574408 ZRANB2O95218 330 aaKnown RBP eCLIP11.37□□□□□ -0.59
USP43-205ENST00000574408 ADRB2P07550 413 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 CETN1Q12798 172 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 BMS1Q14692 1282 aaKnown RBP11.37□□□□□ -0.59
USP43-205ENST00000574408 XKR3Q5GH77 459 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 EEPD1Q7L9B9 569 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 CBWD2Q8IUF1 395 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 PLEKHO2Q8TD55 490 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 COG1Q8WTW3 980 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 SPIRE2Q8WWL2 714 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 ARFGAP3Q9NP61 516 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 HYOU1Q9Y4L1 999 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 OTOFQ9HC10 1997 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 LCTP09848 1927 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 ADGRA3Q8IWK6 1321 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 PALMO75781 387 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 CNGA1P29973 690 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 ADSSP30520 456 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 CXCR5P32302 372 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 ICAM3P32942 547 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 DNA2P51530 1060 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 SNRPFP62306 86 aaKnown RBP11.37□□□□□ -0.59
USP43-205ENST00000574408 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 POLR3FQ9H1D9 316 aaPredicted RBP11.37□□□□□ -0.59
USP43-205ENST00000574408 R3HDMLQ9H3Y0 253 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 ZNF302Q9NR11 478 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 WDR81Q562E7 1941 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 IGSF9BQ9UPX0 1349 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 CCDC151A5D8V7 595 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 SOWAHBA6NEL2 793 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 SPDYE5A6NIY4 337 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 N4BP1O75113 896 aaKnown RBP11.37□□□□□ -0.59
USP43-205ENST00000574408 LRRN2O75325 713 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 UBA1P22314 1058 aaKnown RBP11.37□□□□□ -0.59
USP43-205ENST00000574408 PHLDB3Q6NSJ2 640 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 U2AF1L4Q8WU68 220 aaKnown RBP11.37□□□□□ -0.59
USP43-205ENST00000574408 CCDC127Q96BQ5 260 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 HVCN1Q96D96 273 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 IFT74Q96LB3 600 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 OSBPL9Q96SU4 736 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 C17orf75Q9HAS0 396 aa11.37□□□□□ -0.59
USP43-205ENST00000574408 MYH9P35579 1960 aaKnown RBP11.36□□□□□ -0.59
USP43-205ENST00000574408 CXCL11O14625 94 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 HNRNPDLO14979 420 aaKnown RBP11.36□□□□□ -0.59
USP43-205ENST00000574408 FTCDO95954 541 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 TCP1P17987 556 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms