RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 PLCB3Q01970 1234 aa18.36■□□□□ 0.53
TVP23B-206ENST00000574226 KRT17Q04695 432 aa18.36■□□□□ 0.53
TVP23B-206ENST00000574226 CAMK1Q14012 370 aa18.36■□□□□ 0.53
TVP23B-206ENST00000574226 CTC1Q2NKJ3 1217 aa18.36■□□□□ 0.53
TVP23B-206ENST00000574226 ATG2AQ2TAZ0 1938 aa18.36■□□□□ 0.53
TVP23B-206ENST00000574226 IFNLR1Q8IU57 520 aaPredicted RBP18.36■□□□□ 0.53
TVP23B-206ENST00000574226 RNF149Q8NC42 400 aa18.36■□□□□ 0.53
TVP23B-206ENST00000574226 CNNM3Q8NE01 707 aa18.36■□□□□ 0.53
TVP23B-206ENST00000574226 MCPH1Q8NEM0 835 aa18.36■□□□□ 0.53
TVP23B-206ENST00000574226 CCDC51Q96ER9 411 aa18.36■□□□□ 0.53
TVP23B-206ENST00000574226 ZNF558Q96NG5 402 aa18.36■□□□□ 0.53
TVP23B-206ENST00000574226 NFKBIZQ9BYH8 718 aa18.36■□□□□ 0.53
TVP23B-206ENST00000574226 TLR9Q9NR96 1032 aa18.36■□□□□ 0.53
TVP23B-206ENST00000574226 FAM105AQ9NUU6 356 aa18.36■□□□□ 0.53
TVP23B-206ENST00000574226 RNF19AQ9NV58 838 aa18.36■□□□□ 0.53
TVP23B-206ENST00000574226 CLDND1Q9NY35 253 aa18.36■□□□□ 0.53
TVP23B-206ENST00000574226 DBR1Q9UK59 544 aaKnown RBP18.36■□□□□ 0.53
TVP23B-206ENST00000574226 SPTBN5Q9NRC6 3674 aaKnown RBP18.36■□□□□ 0.53
TVP23B-206ENST00000574226 ZBTB39O15060 712 aa18.35■□□□□ 0.53
TVP23B-206ENST00000574226 ERLIN2O94905 339 aa18.35■□□□□ 0.53
TVP23B-206ENST00000574226 TECP42680 631 aa18.35■□□□□ 0.53
TVP23B-206ENST00000574226 FXR2P51116 673 aaKnown RBP eCLIP18.35■□□□□ 0.53
TVP23B-206ENST00000574226 HYAL1Q12794 435 aa18.35■□□□□ 0.53
TVP23B-206ENST00000574226 PDIA5Q14554 519 aa18.35■□□□□ 0.53
TVP23B-206ENST00000574226 ZNF174Q15697 407 aa18.35■□□□□ 0.53
TVP23B-206ENST00000574226 KCNT2Q6UVM3 1135 aa18.35■□□□□ 0.53
TVP23B-206ENST00000574226 GLB1LQ6UWU2 654 aa18.35■□□□□ 0.53
TVP23B-206ENST00000574226 TMX3Q96JJ7 454 aa18.35■□□□□ 0.53
TVP23B-206ENST00000574226 CDCA3Q99618 268 aaPredicted RBP18.35■□□□□ 0.53
TVP23B-206ENST00000574226 XPNPEP1Q9NQW7 623 aa18.35■□□□□ 0.53
TVP23B-206ENST00000574226 PLXNA4Q9HCM2 1894 aa18.35■□□□□ 0.53
TVP23B-206ENST00000574226 XIRP2A4UGR9 3374 aa18.34■□□□□ 0.53
TVP23B-206ENST00000574226 SPATA31C1P0DKV0 1188 aa18.34■□□□□ 0.53
TVP23B-206ENST00000574226 ATF7P17544 494 aaPredicted RBP18.34■□□□□ 0.53
TVP23B-206ENST00000574226 ALDH7A1P49419 539 aaKnown RBP18.34■□□□□ 0.53
TVP23B-206ENST00000574226 PTENP60484 403 aa18.34■□□□□ 0.53
TVP23B-206ENST00000574226 BMS1Q14692 1282 aaKnown RBP18.34■□□□□ 0.53
TVP23B-206ENST00000574226 CLLU1OSQ5K130 101 aa18.34■□□□□ 0.53
TVP23B-206ENST00000574226 PTCRAQ6ISU1 281 aaPredicted RBP18.34■□□□□ 0.53
TVP23B-206ENST00000574226 EP400NLQ6ZTU2 488 aa18.34■□□□□ 0.53
TVP23B-206ENST00000574226 CATSPER3Q86XQ3 398 aa18.34■□□□□ 0.53
TVP23B-206ENST00000574226 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.34■□□□□ 0.53
TVP23B-206ENST00000574226 HELQQ8TDG4 1101 aa18.34■□□□□ 0.53
TVP23B-206ENST00000574226 MICAL1Q8TDZ2 1067 aa18.34■□□□□ 0.53
TVP23B-206ENST00000574226 MRPS27Q92552 414 aaKnown RBP18.34■□□□□ 0.53
TVP23B-206ENST00000574226 TBC1D32Q96NH3 1257 aa18.34■□□□□ 0.53
TVP23B-206ENST00000574226 NGRNQ9NPE2 291 aaKnown RBP18.34■□□□□ 0.53
TVP23B-206ENST00000574226 UBN1Q9NPG3 1134 aa18.34■□□□□ 0.53
TVP23B-206ENST00000574226 SPG21Q9NZD8 308 aa18.34■□□□□ 0.53
TVP23B-206ENST00000574226 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.34■□□□□ 0.53
TVP23B-206ENST00000574226 CNTNAP2Q9UHC6 1331 aa18.33■□□□□ 0.53
TVP23B-206ENST00000574226 GRXCR2A6NFK2 248 aa18.33■□□□□ 0.52
TVP23B-206ENST00000574226 DNAJB1P25685 340 aa18.33■□□□□ 0.52
TVP23B-206ENST00000574226 ARL2P36404 184 aa18.33■□□□□ 0.52
TVP23B-206ENST00000574226 ADAM15Q13444 863 aa18.33■□□□□ 0.52
TVP23B-206ENST00000574226 RILPL1Q5EBL4 403 aa18.33■□□□□ 0.52
TVP23B-206ENST00000574226 NOTUMQ6P988 496 aa18.33■□□□□ 0.52
TVP23B-206ENST00000574226 LRRC55Q6ZSA7 311 aa18.33■□□□□ 0.52
TVP23B-206ENST00000574226 MRPL10Q7Z7H8 261 aaKnown RBP18.33■□□□□ 0.52
TVP23B-206ENST00000574226 EFHBQ8N7U6 833 aa18.33■□□□□ 0.52
TVP23B-206ENST00000574226 PIGOQ8TEQ8 1089 aa18.33■□□□□ 0.52
TVP23B-206ENST00000574226 BMP2KQ9NSY1 1161 aaPredicted RBP18.33■□□□□ 0.52
TVP23B-206ENST00000574226 KANSL3Q9P2N6 904 aa18.33■□□□□ 0.52
TVP23B-206ENST00000574226 STK39Q9UEW8 545 aa18.33■□□□□ 0.52
TVP23B-206ENST00000574226 PRKAG3Q9UGI9 489 aa18.33■□□□□ 0.52
TVP23B-206ENST00000574226 PCDHB2Q9Y5E7 798 aa18.33■□□□□ 0.52
TVP23B-206ENST00000574226 PRPHP41219 470 aa18.32■□□□□ 0.52
TVP23B-206ENST00000574226 NOMO2Q5JPE7 1267 aa18.32■□□□□ 0.52
TVP23B-206ENST00000574226 HACE1Q8IYU2 909 aa18.32■□□□□ 0.52
TVP23B-206ENST00000574226 URGCPQ8TCY9 931 aa18.32■□□□□ 0.52
TVP23B-206ENST00000574226 TLE6Q9H808 572 aa18.32■□□□□ 0.52
TVP23B-206ENST00000574226 MINDY3Q9H8M7 445 aa18.32■□□□□ 0.52
TVP23B-206ENST00000574226 LRWD1Q9UFC0 647 aa18.32■□□□□ 0.52
TVP23B-206ENST00000574226 H3BQ06 376 aaPredicted RBP18.31■□□□□ 0.52
TVP23B-206ENST00000574226 H3BQV1 296 aa18.31■□□□□ 0.52
TVP23B-206ENST00000574226 INO80B-WBP1J3KQ70 363 aa18.31■□□□□ 0.52
TVP23B-206ENST00000574226 MED24O75448 989 aa18.31■□□□□ 0.52
TVP23B-206ENST00000574226 SRGAP2BP0DMP2 458 aa18.31■□□□□ 0.52
TVP23B-206ENST00000574226 HOXA11P31270 313 aaPredicted RBP18.31■□□□□ 0.52
TVP23B-206ENST00000574226 LTBRP36941 435 aa18.31■□□□□ 0.52
TVP23B-206ENST00000574226 PTGDRQ13258 359 aa18.31■□□□□ 0.52
TVP23B-206ENST00000574226 C4orf32Q8N8J7 132 aa18.31■□□□□ 0.52
TVP23B-206ENST00000574226 IGFLR1Q9H665 355 aa18.31■□□□□ 0.52
TVP23B-206ENST00000574226 ARHGEF35A5YM69 484 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 FSCN2O14926 492 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 USO1O60763 962 aaKnown RBP18.3■□□□□ 0.52
TVP23B-206ENST00000574226 NCLP19338 710 aaKnown RBP18.3■□□□□ 0.52
TVP23B-206ENST00000574226 IRS1P35568 1242 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 NRIP1P48552 1158 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 NDUFV1P49821 464 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 RNASELQ05823 741 aaKnown RBP18.3■□□□□ 0.52
TVP23B-206ENST00000574226 CAPSQ13938 189 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 MCTP1Q6DN14 999 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 FAM178BQ8IXR5 827 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 SLC39A11Q8N1S5 342 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 KCTD17Q8N5Z5 321 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 IGSF22Q8N9C0 903 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 TMEM169Q96HH4 297 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 PRIMPOLQ96LW4 560 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 POLR3FQ9H1D9 316 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms