RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 AGPAT5Q9NUQ2 364 aa29.02■■■□□ 2.24
NPLOC4-215ENST00000574095 GRXCR2A6NFK2 248 aa29.01■■■□□ 2.23
NPLOC4-215ENST00000574095 MED24O75448 989 aa29.01■■■□□ 2.23
NPLOC4-215ENST00000574095 ORC2Q13416 577 aaPredicted RBP29.01■■■□□ 2.23
NPLOC4-215ENST00000574095 NBR1Q14596 966 aa29.01■■■□□ 2.23
NPLOC4-215ENST00000574095 RBM23Q86U06 439 aaKnown RBP29.01■■■□□ 2.23
NPLOC4-215ENST00000574095 CATSPER3Q86XQ3 398 aa29.01■■■□□ 2.23
NPLOC4-215ENST00000574095 PPP2R3CQ969Q6 453 aa29.01■■■□□ 2.23
NPLOC4-215ENST00000574095 DGAT1O75907 488 aa29■■■□□ 2.23
NPLOC4-215ENST00000574095 CD2BP2O95400 341 aaKnown RBP29■■■□□ 2.23
NPLOC4-215ENST00000574095 SKIP12755 728 aa29■■■□□ 2.23
NPLOC4-215ENST00000574095 ERVFC1P60507 584 aa29■■■□□ 2.23
NPLOC4-215ENST00000574095 ADAM15Q13444 863 aa29■■■□□ 2.23
NPLOC4-215ENST00000574095 ZNF558Q96NG5 402 aa29■■■□□ 2.23
NPLOC4-215ENST00000574095 TLR9Q9NR96 1032 aa29■■■□□ 2.23
NPLOC4-215ENST00000574095 NOL7Q9UMY1 257 aaKnown RBP29■■■□□ 2.23
NPLOC4-215ENST00000574095 MEIS3P2A8K0S8 358 aa28.99■■■□□ 2.23
NPLOC4-215ENST00000574095 XRCC6P12956 609 aaKnown RBP eCLIP28.99■■■□□ 2.232e-8■□□□□ 10.2
NPLOC4-215ENST00000574095 NRIP1P48552 1158 aa28.99■■■□□ 2.23
NPLOC4-215ENST00000574095 MXD4Q14582 209 aaPredicted RBP28.99■■■□□ 2.23
NPLOC4-215ENST00000574095 CLUL1Q15846 466 aa28.99■■■□□ 2.23
NPLOC4-215ENST00000574095 PUS10Q3MIT2 529 aaKnown RBP28.99■■■□□ 2.23
NPLOC4-215ENST00000574095 ASAP3Q8TDY4 903 aa28.99■■■□□ 2.23
NPLOC4-215ENST00000574095 TMX3Q96JJ7 454 aa28.99■■■□□ 2.23
NPLOC4-215ENST00000574095 TUFT1Q9NNX1 390 aa28.99■■■□□ 2.23
NPLOC4-215ENST00000574095 BDP1A6H8Y1 2624 aa28.99■■■□□ 2.23
NPLOC4-215ENST00000574095 ZNF623O75123 536 aa28.98■■■□□ 2.23
NPLOC4-215ENST00000574095 U2AF2P26368 475 aaKnown RBP eCLIP28.98■■■□□ 2.23
NPLOC4-215ENST00000574095 HOXA11P31270 313 aaPredicted RBP28.98■■■□□ 2.23
NPLOC4-215ENST00000574095 ARL2P36404 184 aa28.98■■■□□ 2.23
NPLOC4-215ENST00000574095 TRAPPC10P48553 1259 aa28.98■■■□□ 2.23
NPLOC4-215ENST00000574095 RAB27AP51159 221 aa28.98■■■□□ 2.23
NPLOC4-215ENST00000574095 PLCB3Q01970 1234 aa28.98■■■□□ 2.23
NPLOC4-215ENST00000574095 C4orf32Q8N8J7 132 aa28.98■■■□□ 2.23
NPLOC4-215ENST00000574095 MRPS27Q92552 414 aaKnown RBP28.98■■■□□ 2.23
NPLOC4-215ENST00000574095 POLR3CQ9BUI4 534 aaPredicted RBP28.98■■■□□ 2.23
NPLOC4-215ENST00000574095 MRPL9Q9BYD2 267 aaKnown RBP28.98■■■□□ 2.23
NPLOC4-215ENST00000574095 PCDHB2Q9Y5E7 798 aa28.98■■■□□ 2.23
NPLOC4-215ENST00000574095 USO1O60763 962 aaKnown RBP28.97■■■□□ 2.23
NPLOC4-215ENST00000574095 TBX10O75333 385 aa28.97■■■□□ 2.23
NPLOC4-215ENST00000574095 TOB1P50616 345 aaPredicted RBP28.97■■■□□ 2.23
NPLOC4-215ENST00000574095 PTENP60484 403 aa28.97■■■□□ 2.23
NPLOC4-215ENST00000574095 MAEAQ7L5Y9 396 aa28.97■■■□□ 2.23
NPLOC4-215ENST00000574095 FAM178BQ8IXR5 827 aa28.97■■■□□ 2.23
NPLOC4-215ENST00000574095 TLE6Q9H808 572 aa28.97■■■□□ 2.23
NPLOC4-215ENST00000574095 CD320Q9NPF0 282 aa28.97■■■□□ 2.23
NPLOC4-215ENST00000574095 SPG21Q9NZD8 308 aa28.97■■■□□ 2.23
NPLOC4-215ENST00000574095 PUF60Q9UHX1 559 aaKnown RBP28.97■■■□□ 2.23
NPLOC4-215ENST00000574095 PER2O15055 1255 aa28.96■■■□□ 2.23
NPLOC4-215ENST00000574095 CAPSQ13938 189 aa28.96■■■□□ 2.23
NPLOC4-215ENST00000574095 TFDP1Q14186 410 aa28.96■■■□□ 2.23
NPLOC4-215ENST00000574095 UBXN11Q5T124 520 aa28.96■■■□□ 2.23
NPLOC4-215ENST00000574095 EFHBQ8N7U6 833 aa28.96■■■□□ 2.23
NPLOC4-215ENST00000574095 ERMNQ8TAM6 284 aa28.96■■■□□ 2.23
NPLOC4-215ENST00000574095 NACC1Q96RE7 527 aa28.96■■■□□ 2.23
NPLOC4-215ENST00000574095 LZTS1Q9Y250 596 aa28.96■■■□□ 2.23
NPLOC4-215ENST00000574095 INPP5FQ9Y2H2 1132 aa28.96■■■□□ 2.23
NPLOC4-215ENST00000574095 NT5C1B-RDH14C9J2C7 533 aa28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 FSCN2O14926 492 aa28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 OFD1O75665 1012 aa28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 ERLIN2O94905 339 aa28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 GLRA2P23416 452 aa28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 RPA1P27694 616 aa28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 PPM1AP35813 382 aa28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 NDUFV1P49821 464 aa28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 BCAR1P56945 870 aa28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 KRT17Q04695 432 aa28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 POTEGQ6S5H5 508 aa28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 GLB1LQ6UWU2 654 aa28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 SLC39A11Q8N1S5 342 aa28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 PGBD4Q96DM1 585 aa28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 POLR3FQ9H1D9 316 aaPredicted RBP28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 PCDHB6Q9Y5E3 794 aa28.95■■■□□ 2.22
NPLOC4-215ENST00000574095 INO80B-WBP1J3KQ70 363 aa28.94■■■□□ 2.22
NPLOC4-215ENST00000574095 NOMO2Q5JPE7 1267 aa28.94■■■□□ 2.22
NPLOC4-215ENST00000574095 PLPP4Q5VZY2 271 aa28.94■■■□□ 2.22
NPLOC4-215ENST00000574095 AGMOQ6ZNB7 445 aa28.94■■■□□ 2.22
NPLOC4-215ENST00000574095 MRPL10Q7Z7H8 261 aaKnown RBP28.94■■■□□ 2.22
NPLOC4-215ENST00000574095 TBC1D32Q96NH3 1257 aa28.94■■■□□ 2.22
NPLOC4-215ENST00000574095 GPRC5CQ9NQ84 441 aa28.94■■■□□ 2.22
NPLOC4-215ENST00000574095 TBC1D13Q9NVG8 400 aa28.94■■■□□ 2.22
NPLOC4-215ENST00000574095 DBR1Q9UK59 544 aaKnown RBP28.94■■■□□ 2.22
NPLOC4-215ENST00000574095 KIF3AQ9Y496 699 aa28.94■■■□□ 2.22
NPLOC4-215ENST00000574095 TSPAN1O60635 241 aa28.93■■■□□ 2.22
NPLOC4-215ENST00000574095 ALDH7A1P49419 539 aaKnown RBP28.93■■■□□ 2.22
NPLOC4-215ENST00000574095 POU5F1BQ06416 359 aa28.93■■■□□ 2.22
NPLOC4-215ENST00000574095 PTGDRQ13258 359 aa28.93■■■□□ 2.22
NPLOC4-215ENST00000574095 MCTP1Q6DN14 999 aa28.93■■■□□ 2.22
NPLOC4-215ENST00000574095 PDE12Q6L8Q7 609 aaKnown RBP28.93■■■□□ 2.22
NPLOC4-215ENST00000574095 IFNLR1Q8IU57 520 aaPredicted RBP28.93■■■□□ 2.22
NPLOC4-215ENST00000574095 CPB2Q96IY4 423 aa28.93■■■□□ 2.22
NPLOC4-215ENST00000574095 TCF25Q9BQ70 676 aa28.93■■■□□ 2.22
NPLOC4-215ENST00000574095 ENTPD7Q9NQZ7 604 aa28.93■■■□□ 2.22
NPLOC4-215ENST00000574095 CLEC1BQ9P126 229 aa28.93■■■□□ 2.22
NPLOC4-215ENST00000574095 FAM50BQ9Y247 325 aa28.93■■■□□ 2.22
NPLOC4-215ENST00000574095 MBTPS2O43462 519 aa28.92■■■□□ 2.22
NPLOC4-215ENST00000574095 ZC3H11AO75152 810 aaKnown RBP eCLIP28.92■■■□□ 2.22
NPLOC4-215ENST00000574095 GLP2RO95838 553 aa28.92■■■□□ 2.22
NPLOC4-215ENST00000574095 GJB2P29033 226 aa28.92■■■□□ 2.22
NPLOC4-215ENST00000574095 FXR2P51116 673 aaKnown RBP eCLIP28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms