RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 C5orf42Q9H799 3197 aa12.63□□□□□ -0.39
RPAIN-214ENST00000574003 USO1O60763 962 aaKnown RBP12.62□□□□□ -0.39
RPAIN-214ENST00000574003 GLP2RO95838 553 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 GLRA2P23416 452 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 RARRES1P49788 294 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 TOB1P50616 345 aaPredicted RBP12.62□□□□□ -0.39
RPAIN-214ENST00000574003 CDC42EP1Q00587 391 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 ADAM15Q13444 863 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 TTC38Q5R3I4 469 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 UBXN11Q5T124 520 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 POTEGQ6S5H5 508 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 TMEM173Q86WV6 379 aaPredicted RBP12.62□□□□□ -0.39
RPAIN-214ENST00000574003 CDR2LQ86X02 465 aaPredicted RBP12.62□□□□□ -0.39
RPAIN-214ENST00000574003 CATSPER3Q86XQ3 398 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 CPB2Q96IY4 423 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 ZNF558Q96NG5 402 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 INO80BQ9C086 356 aaPredicted RBP12.62□□□□□ -0.39
RPAIN-214ENST00000574003 POLR3FQ9H1D9 316 aaPredicted RBP12.62□□□□□ -0.39
RPAIN-214ENST00000574003 TLE6Q9H808 572 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 TLR9Q9NR96 1032 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 CHST12Q9NRB3 414 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 AGPAT5Q9NUQ2 364 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 CLEC1BQ9P126 229 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 PCDHB2Q9Y5E7 798 aa12.62□□□□□ -0.39
RPAIN-214ENST00000574003 FAM86C2PA6NEL3 165 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 HIDE1A8MVS5 230 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 FSCN2O14926 492 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 HOXA2O43364 376 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 MBTPS2O43462 519 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 OFD1O75665 1012 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 LYPLA2O95372 231 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 EOMESO95936 686 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 OR52Z1P0C646 297 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 SSTR3P32745 418 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-214ENST00000574003 NDUFV1P49821 464 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 HMGN5P82970 282 aaKnown RBP12.61□□□□□ -0.39
RPAIN-214ENST00000574003 GNL2Q13823 731 aaKnown RBP12.61□□□□□ -0.39
RPAIN-214ENST00000574003 CAPSQ13938 189 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 RABEP1Q15276 862 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 ECM1Q16610 540 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 AGMOQ6ZNB7 445 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 SRGAP1Q7Z6B7 1085 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 NOSTRINQ8IVI9 506 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 GJD3Q8N144 294 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 SLC39A11Q8N1S5 342 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 C4orf32Q8N8J7 132 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 BCL7CQ8WUZ0 217 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-214ENST00000574003 TCP11Q8WWU5 503 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 AUTS2Q8WXX7 1259 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 MRPS27Q92552 414 aaKnown RBP12.61□□□□□ -0.39
RPAIN-214ENST00000574003 TCF25Q9BQ70 676 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 EIF2AQ9BY44 585 aaKnown RBP12.61□□□□□ -0.39
RPAIN-214ENST00000574003 GBP3Q9H0R5 595 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 FOXP1Q9H334 677 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-214ENST00000574003 NRDE2Q9H7Z3 1164 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 ANKEF1Q9NU02 776 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 RNF216Q9NWF9 866 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-214ENST00000574003 DNAJB4Q9UDY4 337 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 USP20Q9Y2K6 914 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 HES2Q9Y543 173 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 PCDHB6Q9Y5E3 794 aa12.61□□□□□ -0.39
RPAIN-214ENST00000574003 INO80B-WBP1J3KQ70 363 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 B4GALT5O43286 388 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 TSPAN1O60635 241 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 ZC3H11AO75152 810 aaKnown RBP eCLIP12.6□□□□□ -0.39
RPAIN-214ENST00000574003 ARL2P36404 184 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 BCAR1P56945 870 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 PTENP60484 403 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 PLCB3Q01970 1234 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 NOMO2Q5JPE7 1267 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 LLGL2Q6P1M3 1020 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 ZNF280BQ86YH2 543 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 EFHBQ8N7U6 833 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 SMG8Q8ND04 991 aaKnown RBP12.6□□□□□ -0.39
RPAIN-214ENST00000574003 BSNDQ8WZ55 320 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 TMX3Q96JJ7 454 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 MSLNLQ96KJ4 702 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 CCDC43Q96MW1 224 aaKnown RBP12.6□□□□□ -0.39
RPAIN-214ENST00000574003 APOL6Q9BWW8 343 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 APOL5Q9BWW9 433 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 ENTPD7Q9NQZ7 604 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 TBC1D13Q9NVG8 400 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 SPG21Q9NZD8 308 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 CD207Q9UJ71 328 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 PPME1Q9Y570 386 aa12.6□□□□□ -0.39
RPAIN-214ENST00000574003 PP2D1A8MPX8 630 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 NCK2O43639 380 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 ZNF623O75123 536 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 DGAT1O75907 488 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 DDHD2O94830 711 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 CA8P35219 290 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 SLC11A1P49279 550 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 UBE3AQ05086 875 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 ZP2Q05996 745 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 MBTD1Q05BQ5 628 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 IL17AQ16552 155 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 AMHR2Q16671 573 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 DUSP6Q16828 381 aa12.59□□□□□ -0.39
RPAIN-214ENST00000574003 GLB1LQ6UWU2 654 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms