RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 NBR1Q14596 966 aa14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 PUS10Q3MIT2 529 aaKnown RBP14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 KCNT2Q6UVM3 1135 aa14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 MAEAQ7L5Y9 396 aa14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 ZNF598Q86UK7 904 aaKnown RBP14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 ERMNQ8TAM6 284 aa14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 MRPL9Q9BYD2 267 aaKnown RBP14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 MINDY3Q9H8M7 445 aa14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 XPNPEP1Q9NQW7 623 aa14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 AGPAT5Q9NUQ2 364 aa14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 PUF60Q9UHX1 559 aaKnown RBP14.14□□□□□ -0.15
NPLOC4-213ENST00000573519 ATG2AQ2TAZ0 1938 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 ARID2Q68CP9 1835 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 PLXNA4Q9HCM2 1894 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 GRXCR2A6NFK2 248 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 MED24O75448 989 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 SSTR3P32745 418 aaPredicted RBP14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 PPM1AP35813 382 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 LTBRP36941 435 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 RARRES1P49788 294 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 RAB27AP51159 221 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 KRT17Q04695 432 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 DLX2Q07687 328 aaPredicted RBP14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 ORC2Q13416 577 aaPredicted RBP14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 COL19A1Q14993 1142 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 CTC1Q2NKJ3 1217 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 PLPP4Q5VZY2 271 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 MCTP1Q6DN14 999 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 GLB1LQ6UWU2 654 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 CATSPER3Q86XQ3 398 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 MRPS27Q92552 414 aaKnown RBP14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 PGBD4Q96DM1 585 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 TLE6Q9H808 572 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 TUFT1Q9NNX1 390 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 ENTPD7Q9NQZ7 604 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 FAM50BQ9Y247 325 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 KIF3AQ9Y496 699 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 PCDHB2Q9Y5E7 798 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 CUL9Q8IWT3 2517 aa14.13□□□□□ -0.15
NPLOC4-213ENST00000573519 MEIS3P2A8K0S8 358 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 NT5C1B-RDH14C9J2C7 533 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 INO80B-WBP1J3KQ70 363 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 PER2O15055 1255 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 ZC3H11AO75152 810 aaKnown RBP eCLIP14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 TBX10O75333 385 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 SPATA31C1P0DKV0 1188 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 CA8P35219 290 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 TRAPPC10P48553 1259 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 ERVFC1P60507 584 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 PLCB3Q01970 1234 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 RNASELQ05823 741 aaKnown RBP14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 NCBP1Q09161 790 aaKnown RBP14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 ADAM15Q13444 863 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 CAPSQ13938 189 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 POTEGQ6S5H5 508 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 ASAP3Q8TDY4 903 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 TCF25Q9BQ70 676 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 TRAIPQ9BWF2 469 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 GBP3Q9H0R5 595 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 POLR3FQ9H1D9 316 aaPredicted RBP14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 SPG21Q9NZD8 308 aa14.12□□□□□ -0.15
NPLOC4-213ENST00000573519 XRCC6P12956 609 aaKnown RBP eCLIP14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 U2AF2P26368 475 aaKnown RBP eCLIP14.11□□□□□ -0.156e-21■■□□□ 11.5
NPLOC4-213ENST00000573519 ARL2P36404 184 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 ALDH7A1P49419 539 aaKnown RBP14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 BCAR1P56945 870 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 PTENP60484 403 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 NOMO2Q5JPE7 1267 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 HAUS3Q68CZ6 603 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 TMC7Q7Z402 723 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 FAM178BQ8IXR5 827 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 EFHBQ8N7U6 833 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 URGCPQ8TCY9 931 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 CPB2Q96IY4 423 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 NACC1Q96RE7 527 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 POLR3CQ9BUI4 534 aaPredicted RBP14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 GPRC5CQ9NQ84 441 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 LRWD1Q9UFC0 647 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 CD207Q9UJ71 328 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 BARX2Q9UMQ3 279 aaPredicted RBP14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 LZTS1Q9Y250 596 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 PCDHB6Q9Y5E3 794 aa14.11□□□□□ -0.15
NPLOC4-213ENST00000573519 LRRIQ4A6NIV6 560 aa14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 H3BQV1 296 aa14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 TSPAN1O60635 241 aa14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 ZNF623O75123 536 aa14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 OFD1O75665 1012 aa14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 GLRA2P23416 452 aa14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 RPA1P27694 616 aa14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 GJB2P29033 226 aa14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 HOXA11P31270 313 aaPredicted RBP14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 CCT6AP40227 531 aaKnown RBP14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 PDE12Q6L8Q7 609 aaKnown RBP14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 NOTUMQ6P988 496 aa14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 GJD3Q8N144 294 aa14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 SLC39A11Q8N1S5 342 aa14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 RSAD1Q9HA92 442 aa14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 TBC1D13Q9NVG8 400 aa14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 DBR1Q9UK59 544 aaKnown RBP14.1□□□□□ -0.15
NPLOC4-213ENST00000573519 ARHGEF35A5YM69 484 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms