RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 ADGRA3Q8IWK6 1321 aa15.02■□□□□ -0
CCDC40-209ENST00000573474 GNAT1P11488 350 aa15.02■□□□□ -0
CCDC40-209ENST00000573474 NR2F2P24468 414 aa15.02■□□□□ -0
CCDC40-209ENST00000573474 EFNA5P52803 228 aa15.02■□□□□ -0
CCDC40-209ENST00000573474 POU5F1BQ06416 359 aa15.02■□□□□ -0
CCDC40-209ENST00000573474 STRN3Q13033 797 aa15.02■□□□□ -0
CCDC40-209ENST00000573474 FILIP1LQ4L180 1135 aa15.02■□□□□ -0
CCDC40-209ENST00000573474 NFRKBQ6P4R8 1299 aa15.02■□□□□ -0
CCDC40-209ENST00000573474 APTXQ7Z2E3 356 aaKnown RBP15.02■□□□□ -0
CCDC40-209ENST00000573474 RHPN2Q8IUC4 686 aa15.02■□□□□ -0
CCDC40-209ENST00000573474 CREBRFQ8IUR6 639 aa15.02■□□□□ -0
CCDC40-209ENST00000573474 PCSK9Q8NBP7 692 aaKnown RBP15.02■□□□□ -0
CCDC40-209ENST00000573474 TMEM174Q8WUU8 243 aa15.02■□□□□ -0
CCDC40-209ENST00000573474 LMBR1Q8WVP7 490 aa15.02■□□□□ -0
CCDC40-209ENST00000573474 NAP1L5Q96NT1 182 aaPredicted RBP15.02■□□□□ -0
CCDC40-209ENST00000573474 C2orf40Q9H1Z8 148 aa15.02■□□□□ -0
CCDC40-209ENST00000573474 AGPAT3Q9NRZ7 376 aa15.02■□□□□ -0
CCDC40-209ENST00000573474 A0A1B0GTH6 734 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 MBLAC1A4D2B0 266 aaPredicted RBP15.01□□□□□ -0.01
CCDC40-209ENST00000573474 K7ERI5 159 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 CLIC2O15247 247 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 TPM2P07951 284 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 SRGAP2CP0DJJ0 459 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 MTIF2P46199 727 aaKnown RBP15.01□□□□□ -0.01
CCDC40-209ENST00000573474 COPB1P53618 953 aaKnown RBP15.01□□□□□ -0.01
CCDC40-209ENST00000573474 NR1I3Q14994 352 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 KCNA10Q16322 511 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 CDCA2Q69YH5 1023 aaPredicted RBP15.01□□□□□ -0.01
CCDC40-209ENST00000573474 CCSAPQ6IQ19 270 aaPredicted RBP15.01□□□□□ -0.01
CCDC40-209ENST00000573474 TAS1R3Q7RTX0 852 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 RNF180Q86T96 592 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 SLC9A9Q8IVB4 645 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 ZBTB8OSQ8IWT0 167 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 C12orf56Q8IXR9 622 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 C7orf31Q8N865 590 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 RNF149Q8NC42 400 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 ZBTB10Q96DT7 871 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 EEF2KMTQ96G04 330 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 MAP7D2Q96T17 732 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 IKZF4Q9H2S9 585 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 DMAC2Q9NW81 257 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 AKT3Q9Y243 479 aa15.01□□□□□ -0.01
CCDC40-209ENST00000573474 SMIM35A0A1B0GVV1 85 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 C17orf102A2RUQ5 167 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 N4BP3O15049 544 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 SLC16A3O15427 465 aaKnown RBP15□□□□□ -0.01
CCDC40-209ENST00000573474 CABYRO75952 493 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 MARSP56192 900 aaKnown RBP15□□□□□ -0.01
CCDC40-209ENST00000573474 ADAM17P78536 824 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 CDC42EP1Q00587 391 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 CCDC40Q4G0X9 1142 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 LHX8Q68G74 356 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 CXCL17Q6UXB2 119 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 DRC7Q8IY82 874 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 KIAA0319LQ8IZA0 1049 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 TUBGCP2Q9BSJ2 902 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 NFKBIZQ9BYH8 718 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 VPS16Q9H269 839 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 RTN4Q9NQC3 1192 aaKnown RBP15□□□□□ -0.01
CCDC40-209ENST00000573474 TAB2Q9NYJ8 693 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 HDAC6Q9UBN7 1215 aa15□□□□□ -0.01
CCDC40-209ENST00000573474 PIGRP01833 764 aa14.99□□□□□ -0.01
CCDC40-209ENST00000573474 MYCNP04198 464 aaPredicted RBP14.99□□□□□ -0.01
CCDC40-209ENST00000573474 ASGR1P07306 291 aa14.99□□□□□ -0.01
CCDC40-209ENST00000573474 EPB41P11171 864 aaKnown RBP14.99□□□□□ -0.01
CCDC40-209ENST00000573474 CYP2C9P11712 490 aa14.99□□□□□ -0.01
CCDC40-209ENST00000573474 HOXC8P31273 242 aa14.99□□□□□ -0.01
CCDC40-209ENST00000573474 PHKA2P46019 1235 aa14.99□□□□□ -0.01
CCDC40-209ENST00000573474 PTENP60484 403 aa14.99□□□□□ -0.01
CCDC40-209ENST00000573474 NBPF20Q3BBV1 942 aa14.99□□□□□ -0.01
CCDC40-209ENST00000573474 FRMD5Q7Z6J6 570 aa14.99□□□□□ -0.01
CCDC40-209ENST00000573474 SH3TC2Q8TF17 1288 aa14.99□□□□□ -0.01
CCDC40-209ENST00000573474 BICD1Q96G01 975 aa14.99□□□□□ -0.01
CCDC40-209ENST00000573474 NLRP4Q96MN2 994 aa14.99□□□□□ -0.01
CCDC40-209ENST00000573474 TSEN34Q9BSV6 310 aaKnown RBP14.99□□□□□ -0.01
CCDC40-209ENST00000573474 MKNK1Q9BUB5 465 aa14.99□□□□□ -0.01
CCDC40-209ENST00000573474 METTL14Q9HCE5 456 aaKnown RBP14.99□□□□□ -0.01
CCDC40-209ENST00000573474 FRMD4BQ9Y2L6 1034 aa14.99□□□□□ -0.01
CCDC40-209ENST00000573474 ANKRD63C9JTQ0 380 aa14.98□□□□□ -0.01
CCDC40-209ENST00000573474 HNRNPDLO14979 420 aaKnown RBP14.98□□□□□ -0.01
CCDC40-209ENST00000573474 VTNP04004 478 aa14.98□□□□□ -0.01
CCDC40-209ENST00000573474 GJB1P08034 283 aa14.98□□□□□ -0.01
CCDC40-209ENST00000573474 PRKCSHP14314 528 aaPredicted RBP14.98□□□□□ -0.01
CCDC40-209ENST00000573474 PSMC2P35998 433 aaKnown RBP14.98□□□□□ -0.01
CCDC40-209ENST00000573474 LIG4P49917 911 aa14.98□□□□□ -0.01
CCDC40-209ENST00000573474 CYP2J2P51589 502 aa14.98□□□□□ -0.01
CCDC40-209ENST00000573474 HIC1Q14526 733 aa14.98□□□□□ -0.01
CCDC40-209ENST00000573474 MAPK6Q16659 721 aa14.98□□□□□ -0.01
CCDC40-209ENST00000573474 MAN2A1Q16706 1144 aa14.98□□□□□ -0.01
CCDC40-209ENST00000573474 CEP135Q66GS9 1140 aa14.98□□□□□ -0.01
CCDC40-209ENST00000573474 ARMCX5Q6P1M9 558 aa14.98□□□□□ -0.01
CCDC40-209ENST00000573474 ZNF410Q86VK4 478 aa14.98□□□□□ -0.01
CCDC40-209ENST00000573474 IFNLR1Q8IU57 520 aaPredicted RBP14.98□□□□□ -0.01
CCDC40-209ENST00000573474 ARRDC4Q8NCT1 418 aa14.98□□□□□ -0.01
CCDC40-209ENST00000573474 NOC4LQ9BVI4 516 aaKnown RBP14.98□□□□□ -0.01
CCDC40-209ENST00000573474 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.98□□□□□ -0.01
CCDC40-209ENST00000573474 CCDC113Q9H0I3 377 aa14.98□□□□□ -0.01
CCDC40-209ENST00000573474 INTS13Q9NVM9 706 aa14.98□□□□□ -0.01
CCDC40-209ENST00000573474 ARMCX3Q9UH62 379 aaPredicted RBP14.98□□□□□ -0.01
CCDC40-209ENST00000573474 MOXD2PA6NHM9 499 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms