RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 RESP18Q5W5W9 173 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 PTCRAQ6ISU1 281 aaPredicted RBP13.16□□□□□ -0.3
NDE1-206ENST00000572967 SLC24A5Q71RS6 500 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 CABP7Q86V35 215 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 FSIP1Q8NA03 581 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 KLHL23Q8NBE8 558 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 RNF169Q8NCN4 708 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.16□□□□□ -0.3
NDE1-206ENST00000572967 PABPC5Q96DU9 382 aaKnown RBP13.16□□□□□ -0.3
NDE1-206ENST00000572967 CCDC43Q96MW1 224 aaKnown RBP13.16□□□□□ -0.3
NDE1-206ENST00000572967 PLVAPQ9BX97 442 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 CCSER1Q9C0I3 900 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 CUEDC2Q9H467 287 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 MAGEF1Q9HAY2 307 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 TUFT1Q9NNX1 390 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 HOOK1Q9UJC3 728 aaKnown RBP13.16□□□□□ -0.3
NDE1-206ENST00000572967 PLAGL2Q9UPG8 496 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 MYO7AQ13402 2215 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 A0A0C4DFX4 3053 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 POTEMA6NI47 508 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 TBX10O75333 385 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 P4HBP07237 508 aaKnown RBP13.15□□□□□ -0.3
NDE1-206ENST00000572967 DARSP14868 501 aaKnown RBP13.15□□□□□ -0.3
NDE1-206ENST00000572967 IRS1P35568 1242 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 CCT6AP40227 531 aaKnown RBP13.15□□□□□ -0.3
NDE1-206ENST00000572967 FAM160A1Q05DH4 1040 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 SPIRE1Q08AE8 756 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 DSC3Q14574 896 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 TARBP2Q15633 366 aaKnown RBP13.15□□□□□ -0.3
NDE1-206ENST00000572967 SKOR2Q2VWA4 1001 aaPredicted RBP13.15□□□□□ -0.3
NDE1-206ENST00000572967 XKR3Q5GH77 459 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 ADGRD2Q7Z7M1 963 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 IQUBQ8NA54 791 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 POF1BQ8WVV4 589 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 P2RX5Q93086 422 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 SYAP1Q96A49 352 aaPredicted RBP13.15□□□□□ -0.3
NDE1-206ENST00000572967 NLRP4Q96MN2 994 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 POLR3CQ9BUI4 534 aaPredicted RBP13.15□□□□□ -0.3
NDE1-206ENST00000572967 IGFLR1Q9H665 355 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 ATP6V0A4Q9HBG4 840 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 TMEM161AQ9NX61 479 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 WRAP73Q9P2S5 460 aaPredicted RBP13.15□□□□□ -0.3
NDE1-206ENST00000572967 STK17AQ9UEE5 414 aa13.15□□□□□ -0.3
NDE1-206ENST00000572967 LINC01565O15544 149 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
NDE1-206ENST00000572967 STBD1O95210 358 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 EIF4BP23588 611 aaKnown RBP13.14□□□□□ -0.31
NDE1-206ENST00000572967 RPA1P27694 616 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 SYKP43405 635 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 QARSP47897 775 aaKnown RBP13.14□□□□□ -0.31
NDE1-206ENST00000572967 PSMC5P62195 406 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 CAMK1Q14012 370 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 ANO5Q75V66 913 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 RHPN2Q8IUC4 686 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 THNSL1Q8IYQ7 743 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 CEP57L1Q8IYX8 460 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 COLGALT1Q8NBJ5 622 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 CHAMP1Q96JM3 812 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 CLIC6Q96NY7 704 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 CEP89Q96ST8 783 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 EIF2AK1Q9BQI3 630 aaKnown RBP13.14□□□□□ -0.31
NDE1-206ENST00000572967 LXNQ9BS40 222 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 LRRC27Q9C0I9 530 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 ZSWIM4Q9H7M6 989 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 RNF19AQ9NV58 838 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 KCNH3Q9ULD8 1083 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 XIRP2A4UGR9 3374 aa13.14□□□□□ -0.31
NDE1-206ENST00000572967 A0A087WZ62 844 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 FAM237AA0A1B0GTK4 181 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 PFKFB1P16118 471 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 ZSCAN20P17040 1043 aaPredicted RBP13.13□□□□□ -0.31
NDE1-206ENST00000572967 SSTR3P32745 418 aaPredicted RBP13.13□□□□□ -0.31
NDE1-206ENST00000572967 PBX3P40426 434 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 STAT6P42226 847 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 NDUFV1P49821 464 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 NPEPPSP55786 919 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 CYP4A11Q02928 519 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 DLX2Q07687 328 aaPredicted RBP13.13□□□□□ -0.31
NDE1-206ENST00000572967 COL19A1Q14993 1142 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 RRAGBQ5VZM2 374 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 KANK3Q6NY19 840 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 SHC4Q6S5L8 630 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 ECHDC2Q86YB7 292 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 LRRC43Q8N309 656 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 SPPL3Q8TCT6 385 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 KHSRPQ92945 711 aaKnown RBP eCLIP13.13□□□□□ -0.31
NDE1-206ENST00000572967 FDXACB1Q9BRP7 624 aaPredicted RBP13.13□□□□□ -0.31
NDE1-206ENST00000572967 NIFKQ9BYG3 293 aaKnown RBP13.13□□□□□ -0.31
NDE1-206ENST00000572967 CD320Q9NPF0 282 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 LMBRD1Q9NUN5 540 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 DDX19AQ9NUU7 478 aaKnown RBP13.13□□□□□ -0.31
NDE1-206ENST00000572967 PPME1Q9Y570 386 aa13.13□□□□□ -0.31
NDE1-206ENST00000572967 IGKV6-21A0A0C4DH24 114 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 LYPLA2O95372 231 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 ATF7P17544 494 aaPredicted RBP13.12□□□□□ -0.31
NDE1-206ENST00000572967 LAG3P18627 525 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 SFPQP23246 707 aaKnown RBP eCLIP13.12□□□□□ -0.31
NDE1-206ENST00000572967 NRIP1P48552 1158 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 POLGP54098 1239 aaPredicted RBP13.12□□□□□ -0.31
NDE1-206ENST00000572967 AMPD3Q01432 767 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms